Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00875 ATGAGCGTGAACATAACCTCCATCAAAATCGCCTCCAATGGCGTCTGGCAAGGCGACAACCCCCTCCACTTCGCTTTCCCTCTCTTAATCCTTCAGTCCGTCCTCATTCTCCTCCTCTCTCGCCTCCTCGCCCTCCTCCTCAAACCTCTCCGGCAGCCCAAAGTCATCGCCGAAATCGTCGGTGGGATTCTTCTGGGTCCGTCGGCGCTCGGCCGCAACAAAGCTTATTTGCACCGGATTTTCCCTCAATGGAGCACTCCGATTCTTGAATCCGTGGCCAGCATCGATTTGATCGGAATTCATTCGATTTTTGGGGGTTTTGTGTTTGGATTGGCGATTCCGAAAGGGGGAAGGTTTGCGGAGAGATTGATTGAGAGGATTGAAGATTTTGTGTCGGGTCTTCTTCTTCCTCTGTATTTTGCTTCCAGTGGGTTGAAGACGGATGTGGCTAAGATTAAAGGGGGCAGAGCGTGGGGGCTGCTGGCGTTAGTTATCTCCACTGCTTGCGCCGGTAAGATTCTGGCGACATTTGTGGCGGCGATGGCGTTTCTGATCCCGGCGAGAGAGGCCTTAGCGTTGGGGCTTCTTATGAACACTAAAGGCTTGGTTGAATTGATTGTTCTCAATATTGTGTTAATGGCACTGTTCACAACATTCATCACTACCCCCACCGTGATGGCGGTTTACAAGCCAGCCCGCGGCGGCTCCACCCCACAAACCCACCGGAAACTCCACGACCTCTCGGGCGAAGACGAGCTTCGGATCCTAGCCTGTCTCCACAGCTCTGGCAACGTGCCGTCCCTCATGGGTCTGACTGAAGCAACTCGCAGCACAAAAAACTCATCCCTCAAACTCTTCGTGATGCATCTGGTCGAGCTCACCGAGCGGTCTTCGTCCATCATGATGGTCCAACGCGCCCGCAGAAACGGCTTTCCTTTCTTCGCCAGGTTCCGGAAGGCCGGTGAGTGGCGGGACCAGATGGCTGCTGCCTTTCAGGCCTACAGCCAACTGGGTCGGGTTAAGGTCCGCCCCACTACGGCCGTCTCTTCCTTGGCCACTATGCATGAGGATATCTGCCACGTGGCGAACGAGAAGAGGGTCACGATGATCATCTTGCCATTCCATCGGAATTGGAGGGTGTTTGACGGCGACGGCAAGGAAGAGGAGGAGAATGTGGGCCATGGCTGGAGAGTTGTGAACCAACGGGTTCTGAAGAATGCGCCTTGCTCCGTGGCGGTTCTTGTGGACCGTGGATTTGGGGCCAATACGGTTCATACGCCTGGGCCTGGGCTCATGGTTGGTGTGGCCCAAAGGATTTGTATCGTGTTTTTTGGTGGGCCCGATGACCGGGAGGCGCTGGAGTTGGGTGGCTTGATGGCGGAGCATCCGGCGGTGAAGGTCACGGTGGTAAGGTTCCGGCCGTCGCCATCGAATGGGTTTGAGGGTAGCAACGTCATTTTACGCCCCATGCATTCCAAATCTGGCGACAACCGTTATAGCTTCTCCACAGCTCCAATCAACCCGGAAAAAGAAAAGGAGCTAGATGATGTAGCACTGACTGAATTCAGAAGCAAATGGGATGCAACAGTTGAGTACACAGAGAAGGAGGCCAGCAACACGAACATGATAGTCGAAGGGGTGGTGAGCATCGGAAAGGAAGGTGGTTACGACCTAGTCGTGGTCGGGAAGGGTCGGGTTCCCTCCAGCATGGTGGTGAAACTAGCGGACCGACCGGCAGAGCACGCAGAGTTGGGGCCAGTAGGGGACATACTAGCCAGCTCGGGTAGGGGAATAGTATCATCAGTACTAGTAATTCAACAACATGGAGGAGGTGGTCATGCAGAAGAAGCTCCGGTTATGAAGATAGCAGAATCGAGTAAGAACGAACAGCCTTTGGCAACCGATGGAGCTTCAACTAATGTATAA 1926 54.21 MSVNITSIKIASNGVWQGDNPLHFAFPLLILQSVLILLLSRLLALLLKPLRQPKVIAEIVGGILLGPSALGRNKAYLHRIFPQWSTPILESVASIDLIGIHSIFGGFVFGLAIPKGGRFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIKGGRAWGLLALVISTACAGKILATFVAAMAFLIPAREALALGLLMNTKGLVELIVLNIVLMALFTTFITTPTVMAVYKPARGGSTPQTHRKLHDLSGEDELRILACLHSSGNVPSLMGLTEATRSTKNSSLKLFVMHLVELTERSSSIMMVQRARRNGFPFFARFRKAGEWRDQMAAAFQAYSQLGRVKVRPTTAVSSLATMHEDICHVANEKRVTMIILPFHRNWRVFDGDGKEEEENVGHGWRVVNQRVLKNAPCSVAVLVDRGFGANTVHTPGPGLMVGVAQRICIVFFGGPDDREALELGGLMAEHPAVKVTVVRFRPSPSNGFEGSNVILRPMHSKSGDNRYSFSTAPINPEKEKELDDVALTEFRSKWDATVEYTEKEASNTNMIVEGVVSIGKEGGYDLVVVGKGRVPSSMVVKLADRPAEHAELGPVGDILASSGRGIVSSVLVIQQHGGGGHAEEAPVMKIAESSKNEQPLATDGASTNV 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4931352 4935158 - Cp4.1LG10g08630.1 Cpe10g00875 476412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00875 641 PANTHER BNAC06G14930D PROTEIN 96 623 - -
Cpe10g00875 641 Gene3D - 254 586 - -
Cpe10g00875 641 Pfam Sodium/hydrogen exchanger family 95 218 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe10g00875 641 PANTHER CATION/H + ANTIPORTER 3 97 - -
Cpe10g00875 641 PANTHER CATION/H + ANTIPORTER 96 623 - -
Cpe10g00875 641 PANTHER BNAC06G14930D PROTEIN 3 97 - -
Cpe10g00875 641 Gene3D - 92 233 IPR038770 -
Cpe10g00875 641 Gene3D - 28 91 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00875 Cpe-Chr10:4931352 Cpe14g00481 Cpe-Chr14:3033071 5.30E-21 dispersed
Cpe10g00875 Cpe-Chr10:4931352 Cpe19g00367 Cpe-Chr19:3325303 1.73E-36 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00875 - - cmo:103490056 920.228