Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g00881 | ATGGTGTTTCCCTCTCACCCATCTAATTATCTTGATCCAACAACCCATCAATGGCAACATCAAACCCCAACCCATCAATCTGGGACCAGTTTTCAGCTCGTGTCGCCGCCACGGGCGCCGCCACAAGTCCGCCCTGGCTCGATGGTGGATCGTGCCCGAATGGCGAACCTGCCCGTGCCGGAAACAGCCCTGAAATGTCCAAGATGTGAATCAACTAACACAAAGTTTTGTTATTTCAACAACTATAGCCTCTCTCAGCCACGCCACTTTTGCAAGACCTGCCGTCGTTACTGGACCCGTGGTGGCGCCCTTAGAAGTGTCCCGGTCGGCGGCGGCTACCGCCGGAATAATAAAAGAACCAAAAGTACCTCTAAATCTCCGGTTAACTCCCAATGCCAACCGACAACTATTACTGAGATTTCAGGAGGAGAAACAATGAGATTAAATTACGTACAAAATGAAGGAGGTATGGATTCAACTCATCCCCCCATTGGGATAACAAGCTTCTTAGGGTTTGATCAAATTCAATGGCGGCCACAGCTTCAGCTACACCGATCGCAGCCAGCTCGGTTACTCGGAAACGATGGTGGTGGTGGTGGCGACGCATCGTCGAGCTATAGCATTGTCGGGAAGATGGAAGCGACGAAAATGGAGGACGATGGAGAACACCATGTGAATGTGGGAAAGCCATATTGGGATCGCCATTATTGGAATGCTTTTAATCCTTCATCTTCTTCTTCCCATTTATGA | 750 | 49.6 | MVFPSHPSNYLDPTTHQWQHQTPTHQSGTSFQLVSPPRAPPQVRPGSMVDRARMANLPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKRTKSTSKSPVNSQCQPTTITEISGGETMRLNYVQNEGGMDSTHPPIGITSFLGFDQIQWRPQLQLHRSQPARLLGNDGGGGGDASSSYSIVGKMEATKMEDDGEHHVNVGKPYWDRHYWNAFNPSSSSSHL | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4961166 | 4962328 | + | Cp4.1LG10g08680.1 | Cpe10g00881 | 476418 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g00881 | 249 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Cpe10g00881 | 249 | Pfam | Dof domain, zinc finger | 63 | 118 | IPR003851 | GO:0003677|GO:0006355 | |
Cpe10g00881 | 249 | MobiDBLite | consensus disorder prediction | 8 | 36 | - | - | |
Cpe10g00881 | 249 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 15 | 153 | IPR045174 | GO:0003700|GO:0006355 | |
Cpe10g00881 | 249 | PANTHER | DOF DOMAIN ZINC FINGER PROTEIN | 15 | 153 | - | - | |
Cpe10g00881 | 249 | ProSitePatterns | Zinc finger Dof-type signature. | 66 | 102 | IPR003851 | GO:0003677|GO:0006355 | |
Cpe10g00881 | 249 | MobiDBLite | consensus disorder prediction | 109 | 135 | - | - | |
Cpe10g00881 | 249 | ProSiteProfiles | Zinc finger Dof-type profile. | 64 | 118 | IPR003851 | GO:0003677|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00124 | Cpe10g00881 | CCT | |
Cpe03g00124 | Cpe10g00881 | ECH | |
Cpe08g01160 | Cpe10g00881 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe20g00813 | Cpe-Chr20:7378828 | 9.84E-46 | dispersed | |
Cpe01g02293 | Cpe-Chr1:19379956 | Cpe10g00881 | Cpe-Chr10:4961166 | 1.17E-41 | wgd | |
Cpe01g00186 | Cpe-Chr1:1055284 | Cpe10g00881 | Cpe-Chr10:4961166 | 1.48E-41 | wgd | |
Cpe01g01095 | Cpe-Chr1:6475077 | Cpe10g00881 | Cpe-Chr10:4961166 | 2.97E-45 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe13g00850 | Cpe-Chr13:7470504 | 2.39E-44 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe16g00602 | Cpe-Chr16:6669904 | 8.35E-44 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe19g00362 | Cpe-Chr19:3293086 | 4.42E-71 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe02g01240 | Cpe-Chr2:11148513 | 1.60E-46 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe03g00124 | Cpe-Chr3:627920 | 2.04E-42 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe05g00913 | Cpe-Chr5:6006866 | 1.31E-45 | wgd | |
Cpe10g00881 | Cpe-Chr10:4961166 | Cpe08g01160 | Cpe-Chr8:8615889 | 3.59E-44 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50154 | PF02701 | zf-Dof | 3.20E-31 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g00881 | - | - | cmos:111453164 | 501.13 |