Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00887 ATGGGTAACCATATTGGGAAGATTGGCCACTGCTTCGCCGGCGCCGGCGATATTTCCAGTCGTTATGGTCCTGCCGACATAATCTCCGACCCCCACGACGGCGGTTTTGGCCACTCCTTTTACTATCTCCCACCCGACCCACAAACCCTCCCCTCCTTCAAAGCTTTCCCCGATGATTACATCTCTCCAGCGACCATTTTCCGGTCGATTTCCGGCGCCTCTGTAAGCGCCAACGTCTCAACGCCGCTGTCCACGTCTCTGGTCGATCTCTATCCTTATAGCACGACGTTTGACCGGGCCGCTGCTTTTGATTGCTCGAATTCCTTTGCCTCTGTGCCGCTACAGCCGGTGCCACGCCACTCGATGTCGGGAAATTTCGGTGGATTCCCTTCTTCGGGTCCAATGGAGAGAGGGTTCTTATCCGGGCCCTTGGCCGCCCGGAGCATCGAATCGGGCCCGATAGATCGAGTGGTTTACTCCGGCTCGATTGAGAAGGGCGGCGGACCTGAGAAATTGCAGAGAAGCGTCTCTAACGGCGGCGTTGGAGATAGACAACCGAAATCGAAAAGAAGTCTCATTCGGATTCTGAAGAGAGCCATATCCAAAACCATTTCTCGAAACCAGAAGGCTGCGAGTTCATACAAACATAATGAGAATGCAGCTCAGACTCAAAGCAGTGTTCATTTGAGTAGCCACGCCAGTTTGGCGCAGGAAGACGATGGCGATTACTTTGTCGGCGGTCAGGGCGTACAGTGGGCACAGGGGAAGGCCGGTGAGGATAGAGTTCACGTGGTGATATCGGAGGATAATGGTTGGGTTTTTGTCGGAGTTTATGATGGATTCAACGGCCCTGATGCTCCTGATTACTTACTCGCTAATCTCTACACTGCCGTTCTCAAAGAGCTCAAGGGTTTGATATGGAATGATAAGTTCGATTCAACTGCAACCACGTCTTCCATGAACTCATCCAACTCTGCTTCAATTGAGGAAGACGATCATGGAACAACCCACATAAAAACTCAGGCTAATGTTCATCAACCTACAGAGAACTTTTCGGCAGAAAATAGGACGAGACAGCTGATGAAGAAGGGCGATCAGGATCCAAAGAATTGGAAATGGGAAAGGGAAAGGGAAAGCATAGGATTAGATCACCACAACATATGGGATGAATCAACAACAATCAATCATTCTGAGGTGTTGAATGCTCTGTCTGAAGCATTGAAAAAAACAGAGGAATCATATCTGCAGAATGCAGACAAGATGGCCACAAGAAATCCTGAGCTAGCTCTAATGGGTTCTTGTGTTTTGGTTATGTTAATGAGAGGAGAAGATGTGTACCTGATGAATGTAGGAGACAGCCGTGCAATTGTAGCGCAGCAACTCGAACCATACAGAGACTTGGAGAGAATCAATGAAGGAACACTACGGGTATTAGAATCCCCTGAAAGATTAACAGCCTTGGCTTCCCATCAGCTTACAATGGACCACAGCACGTACACAGAGGAGTCCTTCATTGCATCTTTCCCTGAAGGAGATCCTGCTCAAAATCTCATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAATATGGAATGGCCTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCACGACGACGTTTCAGTTATCATCATTTCATTAGAAGGAAGAATTTGGCATTGGTTGATGTAA 1704 48.53 MGNHIGKIGHCFAGAGDISSRYGPADIISDPHDGGFGHSFYYLPPDPQTLPSFKAFPDDYISPATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRHSMSGNFGGFPSSGPMERGFLSGPLAARSIESGPIDRVVYSGSIEKGGGPEKLQRSVSNGGVGDRQPKSKRSLIRILKRAISKTISRNQKAASSYKHNENAAQTQSSVHLSSHASLAQEDDGDYFVGGQGVQWAQGKAGEDRVHVVISEDNGWVFVGVYDGFNGPDAPDYLLANLYTAVLKELKGLIWNDKFDSTATTSSMNSSNSASIEEDDHGTTHIKTQANVHQPTENFSAENRTRQLMKKGDQDPKNWKWERERESIGLDHHNIWDESTTINHSEVLNALSEALKKTEESYLQNADKMATRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQLEPYRDLERINEGTLRVLESPERLTALASHQLTMDHSTYTEESFIASFPEGDPAQNLIEEVLFRAAKKYGMAFHELLDIPQGERRKYHDDVSVIIISLEGRIWHWLM 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4986613 4989455 - Cp4.1LG10g08600.1 Cpe10g00887 476424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00887 567 Gene3D - 504 559 IPR036457 -
Cpe10g00887 567 Pfam Protein phosphatase 2C 399 499 IPR001932 -
Cpe10g00887 567 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 502 563 - -
Cpe10g00887 567 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 20 502 - -
Cpe10g00887 567 MobiDBLite consensus disorder prediction 161 188 - -
Cpe10g00887 567 ProSiteProfiles PPM-type phosphatase domain profile. 244 558 IPR001932 -
Cpe10g00887 567 PANTHER PROTEIN PHOSPHATASE 2C 502 563 IPR015655 GO:0004722|GO:0006470
Cpe10g00887 567 PANTHER PROTEIN PHOSPHATASE 2C 20 502 IPR015655 GO:0004722|GO:0006470
Cpe10g00887 567 Gene3D - 204 503 IPR036457 -
Cpe10g00887 567 SUPERFAMILY PP2C-like 255 559 IPR036457 -
Cpe10g00887 567 SMART PP2C_4 243 556 IPR001932 -
Cpe10g00887 567 MobiDBLite consensus disorder prediction 207 232 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00887 Cpe19g00351 CCT
Cpe10g00887 Cpe19g00351 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00887 Cpe-Chr10:4986613 Cpe14g00885 Cpe-Chr14:7339290 7.74E-22 dispersed
Cpe10g00887 Cpe-Chr10:4986613 Cpe16g00609 Cpe-Chr16:6698901 3.75E-172 wgd
Cpe10g00887 Cpe-Chr10:4986613 Cpe19g00351 Cpe-Chr19:3077215 8.22E-33 wgd
Cpe10g00887 Cpe-Chr10:4986613 Cpe05g00920 Cpe-Chr5:6041286 2.76E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00887 - - bhj:120069881 828.165