Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00899 ATGGTATCCTCTGTTTTGTTCATCACAATTTTCTCTGCTCTAATTTTCCTGTCCACCCAAACGCTGTCTCAGCACACCCAACTGTTCTATCCTGGATTCAATGTATCCACCAACTTGACTTTGAAGCAATATGCAGGAATCGAGAACAATGGAGTTTTGAGGCTCACCAATTATGGCCCTGATATCATCGGCCAGGCCTTTTACGCCTCTCCAATTCAATTCAAAAACTCCTCCGCCGCCGCACACGGCGGTAGTAGCAACGGCAAAGCTTTTTCTTTCTCCACCTGTTTTGCCTTCTGTATCATCCCCGAGGACAATAACTATGTCGGCCATGGCTTCACTTTCGCTATCGTACCTTCTAAAAATCTCGGTGCTCTTTCACAAACGTATCTCGGCCTCTTCAACAGAAAACCCTCAACCCATATCTTCGCGGTTGAATTCGATACCATCCAGACTGTTGAGGTTAAAGACATCGACAACAATCATGTGGGTATCGATTTAAATAGCTTGATTTCCAATGTCTCTAAACATGCTGCTTATTTTGATGATTCTGGTCAGCTTCATAATCTGACTCTCAAAAGTGGGAAGCCTGTTAAAGCTTGGATTGATTATGATTCTCGTGAATTTACTCTCAATGTTACGATTTCCCCTTTTTCTTCAAAACCCAGAAAGCCACTTCTGTCGTACAGAGTGGATCTTTCGTCAATTTTTTATGAAGAAATGTACATTGGATTTACTGCTTCAACGGGTATACTGGCTTATAGCTCGCAGTATATTTTGGGGTGGAGTTTCGCCATTAATGGCGAAGCTCGAGATCTTGAGCTCTCTTCGCTTCCATTACCCAAACAGAGGAAAACAGGGGCGAAAATCAGTCTCTCTGTTTATTTGTCTGTAACAGCGGCGAGTTTTTTAGCGATCTCTGTTTTCGCTTTTGGTATTTATTTCTTAAGGAAGCATAAGAAATCTAATGAAATCGAGCTGTGGGAGCTTCAAATGGGACCCCATCGATATTCCTATAGAGAACTCAAAAAGGGTACTAGAAATTTCAGCGAGAAGGAGATTCTTGGGTTTGGTGGATCTGGGAAAGTATACAGAGGAACCCTTCCGGTTTCGAAAACAGAAATCGCCGTGAAGCGAATTTTTTATAATTCGAAACAGGGTCTCCGGGAATTTGTGACGGAAATCGCTACAATCGGAAGGCTCCGTCACCGGAATCTGGTTCAGTTGCTTGGGTGGTGTCGGCGGAGGCAGGATCTGCTTATTGTTTACGAATTTATGGCGAATGGGAGCTTGGATAACTATCTATTCGACGATCCGAAAACAATTTTGAATTGGGAACAGAGATTCAAAATCATTAAAGGGGTGGCTTCTGCTCTGCTTTATCTTCACGAAGGGTATAAACAGGTGGTGATACACAGAGACGTGAAGGCGAGCAATGTGTTGTTAGACGGCGAATTGAACGGGAGATTGGGGGATTTCGGGCTTGCGAAGGTGTACGATCATGGGTTTGTTCCGGTTACGACTCGAGTCGTCGGAACTTTGGGTTATTTGGCACCGGAGCTGCCAAGAACAGGGAAACCAACGACGAGCTCCGACGTATACGCGTTTGGGGCTCTGATGTTGGAGGTGGTTTGTGGGCGGCGGCCAGTGGAAGTGAAGGCGCTGCCGGAGGAGATGACGTTAGTGGATTGGGTTTGGGACAAATACAGAGAAGGGCAGCTTTTGGCCGTCGTCGATCCGAAGCTCCGGGGAGACTACGACGAGGTTGAGGCGGCATTGGTATTGAAATTGGGGGTTATGTGTTCGAATAATGAACCGAAGCAACGACCGAGTATGAGGCAGATTGTGCAGTGTTTGGACGGAGAAATTGGCGTCGCCGACGAGTGGAAGGCGCCCGACGGGGGGAGCAACGGTGGGGCGGTGGGGGATTTTGTCGTGTCTTTTACGTCTTTATCCATTACCTGA 1965 46.36 MVSSVLFITIFSALIFLSTQTLSQHTQLFYPGFNVSTNLTLKQYAGIENNGVLRLTNYGPDIIGQAFYASPIQFKNSSAAAHGGSSNGKAFSFSTCFAFCIIPEDNNYVGHGFTFAIVPSKNLGALSQTYLGLFNRKPSTHIFAVEFDTIQTVEVKDIDNNHVGIDLNSLISNVSKHAAYFDDSGQLHNLTLKSGKPVKAWIDYDSREFTLNVTISPFSSKPRKPLLSYRVDLSSIFYEEMYIGFTASTGILAYSSQYILGWSFAINGEARDLELSSLPLPKQRKTGAKISLSVYLSVTAASFLAISVFAFGIYFLRKHKKSNEIELWELQMGPHRYSYRELKKGTRNFSEKEILGFGGSGKVYRGTLPVSKTEIAVKRIFYNSKQGLREFVTEIATIGRLRHRNLVQLLGWCRRRQDLLIVYEFMANGSLDNYLFDDPKTILNWEQRFKIIKGVASALLYLHEGYKQVVIHRDVKASNVLLDGELNGRLGDFGLAKVYDHGFVPVTTRVVGTLGYLAPELPRTGKPTTSSDVYAFGALMLEVVCGRRPVEVKALPEEMTLVDWVWDKYREGQLLAVVDPKLRGDYDEVEAALVLKLGVMCSNNEPKQRPSMRQIVQCLDGEIGVADEWKAPDGGSNGGAVGDFVVSFTSLSIT 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5048944 5050908 + Cp4.1LG10g08420.1 Cpe10g00899 476436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00899 654 Gene3D - 25 274 - -
Cpe10g00899 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 281 IPR013320 -
Cpe10g00899 654 CDD STKc_IRAK 355 621 - -
Cpe10g00899 654 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Cpe10g00899 654 SMART serkin_6 349 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00899 654 ProSiteProfiles Protein kinase domain profile. 349 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00899 654 Pfam Legume lectin domain 27 278 IPR001220 GO:0030246
Cpe10g00899 654 SUPERFAMILY Protein kinase-like (PK-like) 323 619 IPR011009 -
Cpe10g00899 654 Pfam Protein tyrosine and serine/threonine kinase 352 619 IPR001245 GO:0004672|GO:0006468
Cpe10g00899 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Cpe10g00899 654 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 10 631 - -
Cpe10g00899 654 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Cpe10g00899 654 CDD lectin_legume_LecRK_Arcelin_ConA 26 268 IPR001220 GO:0030246
Cpe10g00899 654 Gene3D Transferase(Phosphotransferase) domain 1 426 629 - -
Cpe10g00899 654 PANTHER - 10 631 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00781 Cpe-Chr4:7448701 Cpe10g00899 Cpe-Chr10:5048944 1.07E-142 dispersed
Cpe08g01239 Cpe-Chr8:8981149 Cpe10g00899 Cpe-Chr10:5048944 1.97E-08 dispersed
Cpe09g00840 Cpe-Chr9:7766419 Cpe10g00899 Cpe-Chr10:5048944 8.83E-163 dispersed
Cpe10g00899 Cpe-Chr10:5048944 Cpe20g00435 Cpe-Chr20:2503213 2.92E-162 dispersed
Cpe01g00516 Cpe-Chr1:2966337 Cpe10g00899 Cpe-Chr10:5048944 1.73E-55 transposed
Cpe18g00867 Cpe-Chr18:7950210 Cpe10g00899 Cpe-Chr10:5048944 1.93E-172 transposed
Cpe10g00899 Cpe-Chr10:5048944 Cpe19g00301 Cpe-Chr19:2630207 1.11E-12 wgd
Cpe10g00899 Cpe-Chr10:5048944 Cpe19g00338 Cpe-Chr19:2992737 2.00E-25 wgd
Cpe10g00899 Cpe-Chr10:5048944 Cpe03g00101 Cpe-Chr3:521855 0 wgd
Cpe10g00899 Cpe-Chr10:5048944 Cpe08g01172 Cpe-Chr8:8690103 1.75E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62672 PF07714 PK_Tyr_Ser-Thr 2.80E-43 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00899 - - bhj:120073983 1030.39