Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00915 ATGGCGGAGGGTTTTGAACTCTACCATGTCCCACAGCAAAGCAGGCGAGACAAGCTGAGAGTAGGAGTTGGGAGTGGCGCTGCTAATAATCCCAATTTCCTTCCTTTATATCATCATCATGGTGGTGGTGGTGGTGGTGATGATGATGATGATGATCCCTCTTCTTTAATTTCCACCGATTTTGATTTTCATCAAAACCCCTCTTTTAATCTTCATAATCATAATCATTACCCTCCCACTCCCACGGCTGCTTACGCCACCGCCGCCCACCATCTCCCCCCGCTCCTCCCCGACCAACAACCACCCTTGTCCCTTGACCTCAACCTCCAACACCGCTACGCCTCTTCCCCTACCCCTCTTCTTACCTCCAAATTCTTGAAGCCAGCTCAGCAGCTACTCCACGACCTATTTCACTACGCCGACAAATTGCCGCCTGATTCCCCTCTTCTCGACAGCTTGGGCGGTGATATTCCCACCGCCGCTCTTCATCATGACCCCACCGACGATGGAATTGAAAGCCGGAGGAGAAAATCTAGGCTTATTACCATGCTCGACGAGGTTTATAGAAGATATAAGCTATACTATCAGCAGATGCAGGCAGTGGTGACAACATTCGAGTACGTTGGTGGGCTTGGCAATGCAGCTCCCTACGTGAACTTAGCCGTGAAAGCTATGTTTAAGCACTTCAGATTCTTAAAGAATGCTATTGCCGACCAGCTCCAATTGAACAAGCAGCATCAGCAGCCGCCGCCACCGCCGCCTTATAACCCGTATTGTCAAAGATCTATTCACAACAACAGTGGGGGATTCGTGGATCACCAGCCCGTTTGGCGCCCGCAGAGAGGCCTCCCAGAGAGTGCTGTCACCGTGCTACGAGCTTGGCTGTTTGAACATTTCCTCCATCCTTATCCTACGGATACCGACAAGCTCATGCTGGCTAACCAGACTGGTATCAAACTGGTTCATCAATGCAAGAGTGAGGCTATGGAAGCCAATGGTGGAAGAAATCCACATGCTAGAAACAAGGGAAGCTCAGAAATCTCAGCACAGGGACGCCAATAA 1062 50.38 MAEGFELYHVPQQSRRDKLRVGVGSGAANNPNFLPLYHHHGGGGGGDDDDDDPSSLISTDFDFHQNPSFNLHNHNHYPPTPTAAYATAAHHLPPLLPDQQPPLSLDLNLQHRYASSPTPLLTSKFLKPAQQLLHDLFHYADKLPPDSPLLDSLGGDIPTAALHHDPTDDGIESRRRKSRLITMLDEVYRRYKLYYQQMQAVVTTFEYVGGLGNAAPYVNLAVKAMFKHFRFLKNAIADQLQLNKQHQQPPPPPPYNPYCQRSIHNNSGGFVDHQPVWRPQRGLPESAVTVLRAWLFEHFLHPYPTDTDKLMLANQTGIKLVHQCKSEAMEANGGRNPHARNKGSSEISAQGRQ 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5106944 5110786 - Cp4.1LG10g08350.1 Cpe10g00915 476452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00915 353 Pfam Associated with HOX 120 237 IPR006563 -
Cpe10g00915 353 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 65 318 - -
Cpe10g00915 353 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 9 65 318 - -
Cpe10g00915 353 MobiDBLite consensus disorder prediction 34 55 - -
Cpe10g00915 353 Pfam Homeobox KN domain 294 319 IPR008422 GO:0003677|GO:0006355
Cpe10g00915 353 SMART prehox3 114 238 IPR006563 -
Cpe10g00915 353 MobiDBLite consensus disorder prediction 330 353 - -
Cpe10g00915 353 Gene3D - 283 326 - -
Cpe10g00915 353 SUPERFAMILY Homeodomain-like 270 319 IPR009057 -
Cpe10g00915 353 MobiDBLite consensus disorder prediction 338 353 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00089 Cpe10g00915 CCT
Cpe03g00089 Cpe10g00915 ECH
Cpe08g01183 Cpe10g00915 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00915 Cpe-Chr10:5106944 Cpe13g00140 Cpe-Chr13:1007021 3.92E-40 dispersed
Cpe10g00915 Cpe-Chr10:5106944 Cpe19g00315 Cpe-Chr19:2732723 1.68E-110 wgd
Cpe10g00915 Cpe-Chr10:5106944 Cpe03g00089 Cpe-Chr3:464228 5.28E-72 wgd
Cpe10g00915 Cpe-Chr10:5106944 Cpe08g01183 Cpe-Chr8:8741990 1.85E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00915 - - cmos:111453568 509.99