Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00926 ATGAAGTTGCAGGTCTTGGGTTTCTGGGCAAGCCCCTTCAGCCGCAGAGTGGAGCTTGCTCTGAAGCTCAAAGGCGTCGAATACCAACACATCGAGGAAGATTTGCCCCACAACAAGAGCCATTTGCTCCTCCAATACAACCCAATTCACAAGAAGGTTCCTGTCCTAGTCCACCATGGAAAACCCATTTCTGAGTCTCTTGTGATCCTCGAATACATCGATGAAATCTGGAAAAACAACCCCCTGTTGCCCCAAAATCCGTACGAACGAGCTCTGGCTAGGTTTTGGGCGAAGTATATTGAGGACAAGGTTGTGGTTGCGATGCTGAAGGCTGCGAAAGCCAAAATTGAAGACAGGGAAAAGGGGTTGGAGGAAGCAGGGGAGGCGTTGGAACCGCTTGAGAAGGAGCTTGGAAGCAAGAGGTTCTTTGGGGGAGAGAAGATTGGGTTTGTGGATGTTGTTGGCACTGTGGTAGCTTACTGGGTTCCTGCCATTGATGAAGCTGTTGGGATTCAGATGCTGGGAACTAACAGGTTTCCGAATGTGAAGAAATGGAGTGAAGAGGTTGTGAATCATGGCGTCGTGAAACAGATTCTGCCGCCAAAAGATAAGCTCGTGGCTTATTTGCGAACTGCACGAAATTGCAAGAACAGAGCAATGGCAGAACAGGTTCAAGTGTTCGGTTTCTGGGAAAGTGCCTTCAGTCGCAGAGTGGAGCTAGCTCTCAAACTCAAAGGCATCGAATACCAATACTTCGAGGAAGATTTGCCTCACAACAAGAGCCATTTGCTTCTCCAATACAATCCAATTCACAAAAAGGTCCCTGTTCTTGTCCACAATGGAAAACCCATTTCAGAGTCTCTTGTAATCCTCGAGTACATCGATGAAAATTGGACAACAAACCCATTATTGCCTCAACATCCCCATGACAGAGCTGTTGCTAGATTCTGGGCTAAGTTCATCGATGACAAGGTTGTGGTGGCGGTAGTGAAGGCTGCTGGAAGCAAAGGAGAAGAGAGAGAGAAGGCTGTGGAGGAGGCAGGGGAGGCATTGGGAGCGCTTGAGAAAGAGCTTGGAAGCAGGATGTTGTTTGGAGGGGAGAGGGTTGGGTTTGTGGATGTTGTTGGGAGTGTGATAGTGGGATGGGTTCCTGCCATTGAAGAATGCTTTGGATTTGAGGTGCTGAGAAGTGATAAGTTCCCTAATTTGATGAAATGGAGTGAAGAGGTTGCTAAGCATGGCGTGGTGAAGGAGATTCTGCCTCCTAAACATGAGATTGTTGCATTTATGGAAGCTAATTGGAAATTTTGA 1311 47.6 MKLQVLGFWASPFSRRVELALKLKGVEYQHIEEDLPHNKSHLLLQYNPIHKKVPVLVHHGKPISESLVILEYIDEIWKNNPLLPQNPYERALARFWAKYIEDKVVVAMLKAAKAKIEDREKGLEEAGEALEPLEKELGSKRFFGGEKIGFVDVVGTVVAYWVPAIDEAVGIQMLGTNRFPNVKKWSEEVVNHGVVKQILPPKDKLVAYLRTARNCKNRAMAEQVQVFGFWESAFSRRVELALKLKGIEYQYFEEDLPHNKSHLLLQYNPIHKKVPVLVHNGKPISESLVILEYIDENWTTNPLLPQHPHDRAVARFWAKFIDDKVVVAVVKAAGSKGEEREKAVEEAGEALGALEKELGSRMLFGGERVGFVDVVGSVIVGWVPAIEECFGFEVLRSDKFPNLMKWSEEVAKHGVVKEILPPKHEIVAFMEANWKF 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5174956 5177977 - Cp4.1LG10g08160.1 Cpe10g00926 476463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00926 436 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 211 IPR045073 -
Cpe10g00926 436 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 209 IPR010987 -
Cpe10g00926 436 SFLD Main.3: Omega- and Tau-like 220 432 IPR045073 -
Cpe10g00926 436 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Cpe10g00926 436 SUPERFAMILY GST C-terminal domain-like 75 213 IPR036282 -
Cpe10g00926 436 CDD GST_C_Tau 308 432 IPR045074 GO:0004364|GO:0006749
Cpe10g00926 436 SFLD Glutathione Transferase (cytosolic) 220 432 IPR040079 -
Cpe10g00926 436 SFLD Glutathione Transferase (cytosolic) 2 214 IPR040079 -
Cpe10g00926 436 CDD GST_C_Tau 87 210 IPR045074 GO:0004364|GO:0006749
Cpe10g00926 436 SUPERFAMILY Thioredoxin-like 223 325 IPR036249 -
Cpe10g00926 436 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 307 436 IPR010987 -
Cpe10g00926 436 CDD GST_N_Tau 3 77 - -
Cpe10g00926 436 SUPERFAMILY Thioredoxin-like 1 104 IPR036249 -
Cpe10g00926 436 Pfam Glutathione S-transferase, C-terminal domain 324 411 IPR004046 -
Cpe10g00926 436 Pfam Glutathione S-transferase, C-terminal domain 102 191 IPR004046 -
Cpe10g00926 436 Gene3D Glutaredoxin 220 303 - -
Cpe10g00926 436 Gene3D Glutaredoxin 1 82 - -
Cpe10g00926 436 PANTHER GLUTATHIONE S-TRANSFERASE U8 220 431 - -
Cpe10g00926 436 Gene3D - 304 436 - -
Cpe10g00926 436 Gene3D - 83 219 - -
Cpe10g00926 436 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 222 302 IPR004045 -
Cpe10g00926 436 SUPERFAMILY GST C-terminal domain-like 296 433 IPR036282 -
Cpe10g00926 436 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 220 431 IPR045073 -
Cpe10g00926 436 CDD GST_N_Tau 224 298 - -
Cpe10g00926 436 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Cpe10g00926 436 Pfam Glutathione S-transferase, N-terminal domain 223 296 IPR004045 -
Cpe10g00926 436 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Cpe10g00926 436 Coils Coil 106 129 - -
Cpe10g00926 436 PANTHER GLUTATHIONE S-TRANSFERASE U8 2 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00578 Cpe-Chr1:3332404 Cpe10g00926 Cpe-Chr10:5174956 5.40E-31 dispersed
Cpe04g01384 Cpe-Chr4:11205731 Cpe10g00926 Cpe-Chr10:5174956 3.83E-64 dispersed
Cpe08g00370 Cpe-Chr8:2308785 Cpe10g00926 Cpe-Chr10:5174956 4.62E-54 dispersed
Cpe10g00926 Cpe-Chr10:5174956 Cpe20g00021 Cpe-Chr20:120671 8.42E-51 dispersed
Cpe19g00308 Cpe-Chr19:2674324 Cpe10g00926 Cpe-Chr10:5174956 3.37E-43 dispersed
Cpe10g00921 Cpe-Chr10:5149237 Cpe10g00926 Cpe-Chr10:5174956 8.65E-83 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00926 K00799 - twl:119991530 430.254