Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00945 ATGCGTTCATCGAATAATCCAACGGATACAAAACCACGCAACAGATTATGTGGCTCTTGCCAATCACAAGCCCCCTCTCTCAGCCACATAACAACCCAACCAGAATCCCAAATCCCATCTCACACTCTTCAATTCCCCTCTCAACTCATCGTCGCAATGGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGTCGACGTGCGGCCGAGTTCCGCCCGAGTCCAAGCCCGATTCGGATTCGGTAAGAAAAAAGCTCCAGCAAAGAAATCGCCGCCGTCGAAAACGATATCCGACCGTCCGCTGTGGTTTCCAGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGCGACTACGGATTCGATCCGTTCGGGCTGGGGAAACCGGCAGAGTATTTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATAATCGGGACGAGATTTGAGAGCGCCGACGTGAAATCGACGCCGTTTCAGCCGTACTCGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTGATCCATGGAAGATGGGCGATGTTGGCCACACTCGGCGCTCTCGCCGTTGAAGGCCTCACTGGTATCACTTGGCAAGACGCCGGAAAGGTGGAATTAGTGGAAGGTTCGTCGTACCTTGGGCAGCCGCTGCCCTTCTCCCTGACCACACTGATCTGGATCGAGGTTCTGGTGATCGGATACATCGAGTTTCAAAGGAACGCCGAGCTGGACCCGGAGAAGAGGCTGTACCCAGGAGGCAAGTTCTTCGACCCCTTGGGCTTAGCCGAGGATCCCGAGAAGAAAGCGGTCCTACAATTGGCGGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTAGGCTTTGCGGTTCAGGCTGCTGTCACTGGCAAAGGCCCCCTCAACAACTGGGCCACCCACCTCAGCGACCCACTCCACACCACCATCATTGACAACTTCTCCTCTTGA 1017 56.24 MRSSNNPTDTKPRNRLCGSCQSQAPSLSHITTQPESQIPSHTLQFPSQLIVAMATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPPSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5300445 5302596 + Cp4.1LG10g08060.1 Cpe10g00945 476482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00945 338 Pfam Chlorophyll A-B binding protein 113 309 IPR022796 -
Cpe10g00945 338 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 54 338 IPR001344 GO:0009765|GO:0016020
Cpe10g00945 338 Gene3D Chlorophyll a/b binding protein domain 107 338 - -
Cpe10g00945 338 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 54 338 - -
Cpe10g00945 338 MobiDBLite consensus disorder prediction 1 37 - -
Cpe10g00945 338 SUPERFAMILY Chlorophyll a-b binding protein 100 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00945 Cpe-Chr10:5300445 Cpe13g00808 Cpe-Chr13:7233422 1.87E-45 dispersed
Cpe04g00386 Cpe-Chr4:4501464 Cpe10g00945 Cpe-Chr10:5300445 3.53E-29 transposed
Cpe13g00676 Cpe-Chr13:6360083 Cpe10g00945 Cpe-Chr10:5300445 8.06E-30 transposed
Cpe10g00945 Cpe-Chr10:5300445 Cpe19g00292 Cpe-Chr19:2526940 1.02E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00945 K08915 - csv:101208740 528.48