Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00953 ATGGCTTCCCAGTCCGAGCCATGGCTCATGGAAAACGGAACCCTTAAGCGCTTAACCAAGGAGAGTCGCCACGGCCATGGCCGAACTGCCCACAACTTGTCCTCCTCTTCCCTACGCAAAAAGTCCGATTTAACCCTCGTCTCCAAAATCCAATTCGGCTGTCTCCGCAAGTTCCTCATCAATCTTCAGGAGGTCATTTTGGGAACTAAACTTTCCATTCTCTTCCCTGCCATTCCGCTCGCTATTGTCGCTCAGAGTTTCGGGTTTGGAAGACCGTGGATTTTTGCTTTGAGCTTGCTTGGCCTCACGCCATTGGCTGAACGTGTCAGCTTCCTGACCGAGCAAATCGCTTATTTCACCGGCCCAACAGTTGGGGGGCTTTTGAATGCAACATGTGGGAATGCGACGGAGCTGATAATTGCAATTCTGGCGCTGACACAAGGAAAGATAGACGTGAGGCAAGCGGATGTGAACGCACTAATGCTGATGCTGTCATTACTGTGCCACCTATTGCCGTTATTGTTTGGGTACGCCGCCTCCTCCGCCTCCTCCGCCTCCACTGCCGCCGCCTCCACCCTCCACTTGTCCAGAGCCAGCAGCATTGTAATGCTCGCCGCTTACATTGCTTACTTGGTCTTCCAACTCTGGACTCACCGGACATTATTTGAAACTGAGGAAACCGAAGACGACGACGTTTCTGGAGAAGAGGCAGTGATCGGATTCTGGAGTGCATTTGCATGGCTTGCTGGAATGACACTTCTTATTGCTTTGCTGTCCGAATACGTTGTCAACACAATTGAGGAAGCATCTACTACTTGGGGTTTGTCGGTCAGTTTCCTTAGTATAATCTTGCTCCCAATTGTCGGAAATGCAGCCGAACACGCCGGAGCTATCATATTCGCCTTCAAGAATAAGTTGGACATATCATTGGGAGTTGCATTGGGATCTGCAACACAAATTGCACTTTTTGTGATTCCACTATGTGTGATAGTTGCTTGGACAATGGGAGTGGACATGGACCTGAACTTTAACCTCATGGAAACGGGGTCGCTTGGGTTGGCCATTATTGCCACGGCCTTCACTTTACAAGATGGAACCTCTCACTATATTAAAGGCCTCATTCTTCTCCTCTGCTACATTATCATTGCTGCTTGCTTCTTTGTTTCCAAGACTCAAGAAGATGACAACAATGCCCCCAACTTGGGACTCCAATCATCAAGCCAATCAATCTTCAGAGCTTAA 1242 48.95 MASQSEPWLMENGTLKRLTKESRHGHGRTAHNLSSSSLRKKSDLTLVSKIQFGCLRKFLINLQEVILGTKLSILFPAIPLAIVAQSFGFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIAILALTQGKIDVRQADVNALMLMLSLLCHLLPLLFGYAASSASSASTAAASTLHLSRASSIVMLAAYIAYLVFQLWTHRTLFETEETEDDDVSGEEAVIGFWSAFAWLAGMTLLIALLSEYVVNTIEEASTTWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIALFVIPLCVIVAWTMGVDMDLNFNLMETGSLGLAIIATAFTLQDGTSHYIKGLILLLCYIIIAACFFVSKTQEDDNNAPNLGLQSSSQSIFRA 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5356035 5360453 - Cp4.1LG10g07910.1 Cpe10g00953 476490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00953 413 Pfam Sodium/calcium exchanger protein 93 169 IPR004837 GO:0016021|GO:0055085
Cpe10g00953 413 Pfam Sodium/calcium exchanger protein 244 385 IPR004837 GO:0016021|GO:0055085
Cpe10g00953 413 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 150 401 - -
Cpe10g00953 413 Gene3D - 122 388 IPR044880 -
Cpe10g00953 413 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 4 152 - -
Cpe10g00953 413 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 150 401 IPR004713 GO:0006812|GO:0008324|GO:0016021
Cpe10g00953 413 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 152 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00953 Cpe19g00283 CCT
Cpe10g00953 Cpe19g00283 ECH
Cpe08g01222 Cpe10g00953 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00953 Cpe-Chr10:5356035 Cpe02g01752 Cpe-Chr2:14286057 5.98E-86 dispersed
Cpe10g00953 Cpe-Chr10:5356035 Cpe19g00283 Cpe-Chr19:2455207 0 wgd
Cpe10g00953 Cpe-Chr10:5356035 Cpe08g01222 Cpe-Chr8:8906933 2.59E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00953 K07300 - csv:101213857 686.797