Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00956 ATGGAGGATTGCGATCGCCGTGCTTTTCTTCACCGACGAACGAATCGAATCGGCGTCAATGCGGAGGCGGCAGCGGCGGCGGATAGGTTTCCGGCGTGGAGCGTACCGGAGACGAAGGAACTGCTAGCGATAAGAGCGGCGCTGGATAGAAGGTTCTCGGAAATGAAACAGAACAGAATGCTTTGGATTTCGGTCGCCGGTAAGATGAAGGCGAAAGGCTTTAATCGGAACGACGAGCAGTGCAAGTGCAAGTGGAAAAATCTCGTCACGCGCTATAAGGGGTGTGAAACTATGGATCCTAAAGCTCTAAAGCAACAATTTCCATTTTACGACGACCTCCACACCATTTTCACCGCAAGGATGCAAAAGAATTGGTGGATCGAACCCGAAAACCGAGCAAAAGACTCGAAAAGGAAAGCCATGACGGAGCGATTGTCTAGCGAGGACCCGAAAAGGGGAAAAAGGAGGAGAGAAGAAGATGAGAGAAGCAATTTGAAGGAAATAATGAAGGGGTTTGTGGAGAGAGAGAAGGAAATGGAGAGGCAATGGAGAGAAGCGTTTAGGGTTAGAGAGGAAGAGAGAAGGTTGAAGGAGAAGGAATGGAGGATGAAAATGGAAGGTCTAGAGAGAGAGAAGATGATGACGTGGATAATGTGGAGAGAGAAAGATGATGAGAGGAGAGAGAGAGAGGAAGCAAGGGCTTTGAACACTCATGCTTTCATCTATGCTTTGTTGAGTAGCTTCACTTAA 750 48.13 MEDCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHAFIYALLSSFT 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5403241 5405645 + Cp4.1LG10g07940.1 Cpe10g00956 476493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00956 249 CDD GT1 33 96 - -
Cpe10g00956 249 PANTHER - 9 162 - -
Cpe10g00956 249 PANTHER - 162 248 - -
Cpe10g00956 249 MobiDBLite consensus disorder prediction 132 162 - -
Cpe10g00956 249 Gene3D - 33 94 - -
Cpe10g00956 249 Pfam Myb/SANT-like DNA-binding domain 32 115 IPR044822 -
Cpe10g00956 249 ProSiteProfiles Myb-like domain profile. 33 89 IPR001005 -
Cpe10g00956 249 PANTHER - 162 248 - -
Cpe10g00956 249 PANTHER - 9 162 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00048 Cpe10g00956 CCT
Cpe08g01227 Cpe10g00956 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00956 Cpe-Chr10:5403241 Cpe11g00054 Cpe-Chr11:285130 2.01E-11 dispersed
Cpe10g00956 Cpe-Chr10:5403241 Cpe03g00048 Cpe-Chr3:258925 1.98E-54 wgd
Cpe10g00956 Cpe-Chr10:5403241 Cpe08g01227 Cpe-Chr8:8927691 4.49E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50159 PF13837 Myb_DNA-bind_4 8.80E-18 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00956 - - csv:101218250 316.62