Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00979 ATGGGAGCCTGCTGCACAAAAGATCACATCCATGGAGGAGGCTACATGACCTATGATAGAGATGAGAGGGATTCCAATGCCGGCGACGACGGAGAAGAGGTCCGACGCGGTGACGACGGCGAGACTGTTAGACTCCGTGGATCCTCTGCCTTCACATCAATGTTCACTCAACGAGGAAGAAAAGGAGTCAATCAAGATTCAATGACGATTTGGGAGGATTTCTCAGGGGAGAAAGATTTGGTGTTTTGTGGAGTTTTTGATGGTCATGGTCCTTCTGGTCATAGGGTTGCTCGTTATGCACGAGATGTGCTACCCACGAAGCTCTCTAAAGCAATCAAAAAACACCCATCGAAACCCGAAGATGGATTGGTTTCTATTTGGGAAGCTGCTTTTGAAGAATCTTTCAAAGAATTTGATCAAGAACTCGGCTATGATTCTTCTATTGATTGTTTCTGTAGTGGAGCAACAGCCGTGACCATTATCAAACAGGGAGAGCATTTGGTGGTGGCTAACTTGGGTGACTCCCGGGCGGTTCTCTGCACCAGAGGAGATAAACATCAACATATTCCCATCCAATTAACAGTCGATCACAAACCAAATATTCCATGCGAGGCAGAAAGAATACACAACAGCCATGGCAGAATCACAGCAGAAAAAGAAGACCCAGATATACACAGAGTATGGGTACCAGATGCAGATTACCCAGGCCTGGCCATGTCAAGATCCTTAGGCGATTTTTGCCTAAAAGATTATGGCGTTATCTCAAAGCCTCAAATCTCCTACAGAAATCTCACAAGAAAAGACGAGTTCATCGTTCTAGCAACAGATGGGGTATGGGATGTGTTGACGAACAAGCAAGTAATCAACATAGTTGCATCAGCAAAGAACCGATCCACGGCAGCGAAATTGGTAGTGAAACTAGCTGTTCGAGAATGGAAACGACGATTTCCAGGGTCGATGATCGACGATTGTGCAGTGATTTGCGTGTTCTTCAAGAACCCACCAATGTTGATGAAATCAATGACGAGCGTGGGGCGGCGGAACGTGAGAAGCCACCCAGAATTTGCAGTTTCAAGAAGCTGTAAATCAATGGGGAATGATAGAACAAGAGAAGAAGCAGGTGGGTCTGTGAACAGAGATTCTTCCAAGGAAGAACAGGGAATTTGCAGAAGCAATTCACTGACGAGGGGTCCGCCATTTTCGAGGGCTTTGAGCCATAATCTGAAAATGGGCAAGTCTTGTCGTGAAGTTGAAGCATGTTGA 1263 45.92 MGACCTKDHIHGGGYMTYDRDERDSNAGDDGEEVRRGDDGETVRLRGSSAFTSMFTQRGRKGVNQDSMTIWEDFSGEKDLVFCGVFDGHGPSGHRVARYARDVLPTKLSKAIKKHPSKPEDGLVSIWEAAFEESFKEFDQELGYDSSIDCFCSGATAVTIIKQGEHLVVANLGDSRAVLCTRGDKHQHIPIQLTVDHKPNIPCEAERIHNSHGRITAEKEDPDIHRVWVPDADYPGLAMSRSLGDFCLKDYGVISKPQISYRNLTRKDEFIVLATDGVWDVLTNKQVINIVASAKNRSTAAKLVVKLAVREWKRRFPGSMIDDCAVICVFFKNPPMLMKSMTSVGRRNVRSHPEFAVSRSCKSMGNDRTREEAGGSVNRDSSKEEQGICRSNSLTRGPPFSRALSHNLKMGKSCREVEAC 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5533633 5539206 - Cp4.1LG10g07630.1 Cpe10g00979 476516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00979 420 MobiDBLite consensus disorder prediction 15 38 - -
Cpe10g00979 420 Pfam Protein phosphatase 2C 71 309 IPR001932 -
Cpe10g00979 420 SUPERFAMILY PP2C-like 49 334 IPR036457 -
Cpe10g00979 420 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 378 - -
Cpe10g00979 420 SMART PP2C_4 41 329 IPR001932 -
Cpe10g00979 420 MobiDBLite consensus disorder prediction 364 386 - -
Cpe10g00979 420 CDD PP2Cc 53 331 IPR001932 -
Cpe10g00979 420 ProSiteProfiles PPM-type phosphatase domain profile. 51 331 IPR001932 -
Cpe10g00979 420 Gene3D - 41 333 IPR036457 -
Cpe10g00979 420 MobiDBLite consensus disorder prediction 360 402 - -
Cpe10g00979 420 PANTHER ALPHABET, ISOFORM E-RELATED 1 378 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00979 Cpe19g00135 CCT
Cpe10g00979 Cpe19g00135 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00979 Cpe-Chr10:5533633 Cpe02g01342 Cpe-Chr2:11885714 2.51E-108 dispersed
Cpe10g00979 Cpe-Chr10:5533633 Cpe19g00135 Cpe-Chr19:1057562 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00979 - - csv:101209063 662.144