Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00992 ATGGAGAACAAAGGGGCTATCTTGATGCAACGTTATGAATTAGGAAGGCTTCTGGGGCAGGGAACCTTTGCCAAGGTTTACCATGCTAGGGACATTAAAACTGGTGTGAGTGTGGCTATTAAAGTTATCGACAAGGAGAAGATCTTGAAGGTTGGGATGATCGATCAGATCAAGAGGGAGATCTCTGTCATGAGATTAGTTAAGCATCCCAACGTAGTTGAGCTATATGAGGTTATGGCAACCAAAACTAAAATTTACTTTGTCATGGAATATGTCAAAGGGGGTGAGCTATTCAACAAGGTATCCAAAGGAAAGCTTAAAGAAGCTGTTGCACGGAAATATTTTTGGCAGCTGATCAGTGCTGTCGATTATTGCCACAGTAGAGGAATATGCCATCGAGATTTGAAACCGGAAAACTTACTGTTGGATGAACATGGTAACTTGAAGGTTTCTGATTTTGGGTTGAGTGCTCTTGCCGAATCTAAACGCCAAGATGGATTGCTCCATACTACCTGTGGAACCCCTGCTTATGTTGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCATGTGGAGTGATTTTATTCGTTCTATTGGCTGGTTATCTCCCATTCCATGATTCTAATCTAATGGAGATGTATAAGAAGATTGGGAAAGGAGAATTTAAATTCCCCAACTGGTTTGCTCCAGAGGTGCGCAAGCTGTTGTCAAAGATTTTGGATCCTAACCCAAATACCAGGATTACTATTGCCAAAATAATGGGAAGTTCTTGGTTAAGGAGGGAGAGTGTGAAACCAAAAATTAATACCGAAGACGTGAAAGAAGTTGCTCCTTTGGATGTCGATACAATTTTCGTGTCTATGACCGAGGGCAGGGATTCTGTCAGAGAGCTGAAGCAAGAAGTGGGAAAGCCATTGAATATGAACGCGTTCGACATAATCTCCTTGTCATCAGGTTTCGATTTGTCAGGATTGTTCGAGGAGACTAATCAAAAGAAAGAAGTAAGATTCACATCGAACAAGTCGGCTTCCACCATCATCTCTAAACTGCAAGACATTGCAAAGTGCCTGAAATTGAAAATCAAGAAGAAAGACAAAGGCGTACTGAAGATCGAAGGGTGCAAGGAAGGTCGAAAAGGAGCTGTATGTATTGATGCAGAGATTTTCGAGGTCACCCCATCATTCCATATTGTCGAAATGAAGAAGTCAAACGGAGATACTCTGGAATATCATAAGTTAATGAAAGACGATATAAGACCCGCCCTGAAGGACATTGTCTGGACCTGGCAAGGCGAGCAGCAACATAGACAGCTACCACAAGCAGAACAACAATGTCGAGAAGAAGCGCAACAACAGTCTGGTACCGATCAATTATATAACGCGGGACTGTTGGAGGCTTCTCCTTAG 1428 42.37 MENKGAILMQRYELGRLLGQGTFAKVYHARDIKTGVSVAIKVIDKEKILKVGMIDQIKREISVMRLVKHPNVVELYEVMATKTKIYFVMEYVKGGELFNKVSKGKLKEAVARKYFWQLISAVDYCHSRGICHRDLKPENLLLDEHGNLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGYLPFHDSNLMEMYKKIGKGEFKFPNWFAPEVRKLLSKILDPNPNTRITIAKIMGSSWLRRESVKPKINTEDVKEVAPLDVDTIFVSMTEGRDSVRELKQEVGKPLNMNAFDIISLSSGFDLSGLFEETNQKKEVRFTSNKSASTIISKLQDIAKCLKLKIKKKDKGVLKIEGCKEGRKGAVCIDAEIFEVTPSFHIVEMKKSNGDTLEYHKLMKDDIRPALKDIVWTWQGEQQHRQLPQAEQQCREEAQQQSGTDQLYNAGLLEASP 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5638980 5640407 + Cp4.1LG10g07540.1 Cpe10g00992 476529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00992 475 MobiDBLite consensus disorder prediction 455 469 - -
Cpe10g00992 475 CDD CIPK_C 316 430 - -
Cpe10g00992 475 Gene3D Phosphorylase Kinase; domain 1 8 93 - -
Cpe10g00992 475 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00992 475 Gene3D Kinase associated domain 1, KA1 310 435 - -
Cpe10g00992 475 Gene3D Transferase(Phosphotransferase) domain 1 94 284 - -
Cpe10g00992 475 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00992 475 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Cpe10g00992 475 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Cpe10g00992 475 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 449 - -
Cpe10g00992 475 MobiDBLite consensus disorder prediction 455 475 - -
Cpe10g00992 475 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00992 475 Pfam NAF domain 312 370 IPR004041 GO:0007165
Cpe10g00992 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Cpe10g00992 475 PANTHER - 2 449 - -
Cpe10g00992 475 CDD STKc_SnRK3 11 265 - -
Cpe10g00992 475 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00992 Cpe19g00146 CCT
Cpe10g00992 Cpe19g00146 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g00800 Cpe-Chr9:7438499 Cpe10g00992 Cpe-Chr10:5638980 0 dispersed
Cpe10g00139 Cpe-Chr10:885645 Cpe10g00992 Cpe-Chr10:5638980 3.31E-177 dispersed
Cpe10g00992 Cpe-Chr10:5638980 Cpe20g00467 Cpe-Chr20:2703149 0 dispersed
Cpe12g00166 Cpe-Chr12:1086048 Cpe10g00992 Cpe-Chr10:5638980 1.24E-130 dispersed
Cpe17g00170 Cpe-Chr17:1082441 Cpe10g00992 Cpe-Chr10:5638980 2.50E-133 dispersed
Cpe17g01060 Cpe-Chr17:8026416 Cpe10g00992 Cpe-Chr10:5638980 2.32E-46 dispersed
Cpe10g00992 Cpe-Chr10:5638980 Cpe19g00146 Cpe-Chr19:1152168 0 wgd
Cpe10g00992 Cpe-Chr10:5638980 Cpe05g00997 Cpe-Chr5:6525607 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62674 PF00069 Pkinase 8.10E-77 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00992 K07198 - csv:101209068 787.719