Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00995 ATGCCGCCGTTCGACGACAATCCTCCGCCGCGACTGGTCCGCGGCGACTCTCTGCCGGAAGGAATCCTGTTCGGAAAATACGAACTCGGTAAGCTATTAGGATGTGGAGCTTTTGCGAAGGTCTACCATGGGAGAAACGTTCTTACTGGACAGAGCGTCGCGATTAAGATCGTTAACAAACTCAAAGTCCTCAAAGGCGGTTTCAAGGCGCACGTTAAGAGAGAAATCGCTATCATGCGCCGTCTCCGTCATCCGAACGTCGTTCGTCTGTTTGAAGTTCTGGCGACGAAGACGAAGATTTATTTCGTGATGGAGTTTGCGAAAGGAGGAGAGCTGTTTGGTAAAGTTTCCAAGGGACGGTTTAGTGAGAATCTTAGCCGTCGGTATTTTCAGCAGTTAATCACCGCCGTTGGATATTGTCATTCCCAAGGGATTTTTCATCGCGATTTGAAACCGGAAAATCTCCTTCTCGATGATAATTTCGATCTCAGAGTTTCCGATTTTGGACTTAGCGCTCTCACCGATCAGATTCGTCCCGACGGATTGCTACACACTCTCTGTGGTACTCCGGCTTACGTCGCGCCGGAGATTCTCGCCAAGAAAGGCTACGACGGAGCCAAAATCGACGTCTGGTCCTGCGGGATTATCCTCTATGTTCTTACCACTGGATACCTTCCGTTTAACGATTCGAATTTAATGGCGATGTATCGGAAGATTTACAGAGGCGATTTCCGGTGCCCTAAATGGACCTCGCCAGATCTGCGGCGGTTTCTCTCGAGGCTTCTGGATACGAATCCGGAGACGAGGATTACCGTCGATGAGATTCATCAAGATCCGTGGTTCGTGAAGGGATTTCAGGAGGAGAAGCTTCAAATCGAAGATTCCGGTTCAGAGATTTACGGTGATGTGAACAATGCTAAATGTTTGAATGCTTTTGATCTAATTTCCTTCTCACCTGGCTTCGATTTGACTGGATTAATCAACGAAACGGAATTTTCCTCTGGCGTTGAGCGGTTTCTCTCCGCCGAATCGCCGGAGAAGATCATAGTGACGGTTGAGGAGGCTTCGAAGTCGGAAAATGCTGCCGTGGAGAAAAACGGCTGGGGAGCTAAAGTGGAGGGTCTCGACGGCGGGTTCATCGCCGTTATTGATATTTTCCGGCTGACGGAGGAATTAGTGGTGGTTGAGATTAAAAACAGAGTAAGGGAAGTAGATCCAGACGGTCAGATTTGGAAAGATATATTGAGACCTCAACTAGAATGTTTGATCTACCGGTCGGAGTGA 1284 48.52 MPPFDDNPPPRLVRGDSLPEGILFGKYELGKLLGCGAFAKVYHGRNVLTGQSVAIKIVNKLKVLKGGFKAHVKREIAIMRRLRHPNVVRLFEVLATKTKIYFVMEFAKGGELFGKVSKGRFSENLSRRYFQQLITAVGYCHSQGIFHRDLKPENLLLDDNFDLRVSDFGLSALTDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKIDVWSCGIILYVLTTGYLPFNDSNLMAMYRKIYRGDFRCPKWTSPDLRRFLSRLLDTNPETRITVDEIHQDPWFVKGFQEEKLQIEDSGSEIYGDVNNAKCLNAFDLISFSPGFDLTGLINETEFSSGVERFLSAESPEKIIVTVEEASKSENAAVEKNGWGAKVEGLDGGFIAVIDIFRLTEELVVVEIKNRVREVDPDGQIWKDILRPQLECLIYRSE 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5660936 5662219 - Cp4.1LG10g07500.1 Cpe10g00995 476532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00995 427 Gene3D Transferase(Phosphotransferase) domain 1 21 309 - -
Cpe10g00995 427 ProSiteProfiles Protein kinase domain profile. 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00995 427 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Cpe10g00995 427 CDD CIPK_C 310 419 - -
Cpe10g00995 427 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 21 425 - -
Cpe10g00995 427 SMART serkin_6 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00995 427 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Cpe10g00995 427 Pfam NAF domain 307 365 IPR004041 GO:0007165
Cpe10g00995 427 PANTHER - 21 425 - -
Cpe10g00995 427 Gene3D Kinase associated domain 1, KA1 310 425 - -
Cpe10g00995 427 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00995 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Cpe10g00995 427 SUPERFAMILY Protein kinase-like (PK-like) 23 290 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g00995 Cpe19g00148 CCT
Cpe10g00995 Cpe19g00148 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00995 Cpe-Chr10:5660936 Cpe16g00684 Cpe-Chr16:7092122 5.25E-178 dispersed
Cpe10g00995 Cpe-Chr10:5660936 Cpe19g00148 Cpe-Chr19:1180440 0 wgd
Cpe10g00995 Cpe-Chr10:5660936 Cpe05g00998 Cpe-Chr5:6530352 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62675 PF00069 Pkinase 5.80E-71 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00995 - K12761 csv:116403168 789.26