Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g00999 ATGGCACAGCCTTCTGGGTATGCTGAAACAGACCCATCTGGTCGCTATGGACGGTTTAGAGAGATTCTCGGGAAAGGAGCGATGAAGACGGTATATAAAGCCTTTGATGAGGTGCTTGGGATTGAAGTGGCATGGAACCAAGTCCAGCTCAAAGATGTGTTCCATTCCCCTGAGGAACTACAACGTCTCTACTCAGAAGTTCATCTCCTCAAGAACCTCAACCACGACTCGATCATCCGATTCTACGCTTCATGGATCGATACTCATCGTCGAACCTTCAACTTCATCACCGAAATGTTCACCTCCGGCAGCCTTAGAGAGTACCGACAAAAACATCGAAACATCAATATCGAAGCGATCAAGAACTGGGCTCGACAAATCCTACACGGCCTAGCTTATCTTCATGGCCATGATCCTCCTGTAATCCATAGAGATCTTAAATGTGATAACATATTCATCAATGGCCATCTTGGGCAAGTTAAAATTGGTGACTTGGGACTTGCAACCATCCTTCATGATTCTCAACACGCTCATAGTGTCATAGACTTGGAGGCCCAAAATTTTGTAAAGAAATGCTTGGAGAATGTTTCAAAGAGGGTGCCTGCCAAAGAGCTCTTGCTTGACCCATTTCTAGCTTCCAGTAACAACAATGGCTCTCATCAAGAACACTTCTTGTGTTCATCACAAACTCCAAACAATTCAATGTCAAGAAGGACAGACATGGTCATTTCTGGATCAATGAATCCCAACGACGATACCGTTTTTCTAAAAGTGCATATCAAAGTGAAGAACGGTAAAGCTAAGAACGTACACTTTGCATTCGACACGATAAACGATACAGCTATCGACGTTGCGACCGAGATGGTTAAAGAGTTGGAAATCAGTGATTGGGATCCGAATGAGTATGGAAGAGATCCTCAATGCATATCAACCACCAAGAACCCTACAAGATTTTGCCCTACCATGAAGATAGACGCGCACCATTTGAGGTATAAGGACATTAAAGTAATGGTGGATCGAGAAGCGTTTGAGAGACGAACCCGATCTGATAAGTCGGCTAGGCTTACGAGGGTGAAGTCAATGGTGAACCTCCGTAGCGAGGCGTTGCACCGATCGTTAGTAGAGATGTTGTTGAAGAAGCGATTGTTTAATACGGTGGATGCCATGGAGAATATTGGATACCAAAAGCCATAG 1194 44.39 MAQPSGYAETDPSGRYGRFREILGKGAMKTVYKAFDEVLGIEVAWNQVQLKDVFHSPEELQRLYSEVHLLKNLNHDSIIRFYASWIDTHRRTFNFITEMFTSGSLREYRQKHRNINIEAIKNWARQILHGLAYLHGHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLATILHDSQHAHSVIDLEAQNFVKKCLENVSKRVPAKELLLDPFLASSNNNGSHQEHFLCSSQTPNNSMSRRTDMVISGSMNPNDDTVFLKVHIKVKNGKAKNVHFAFDTINDTAIDVATEMVKELEISDWDPNEYGRDPQCISTTKNPTRFCPTMKIDAHHLRYKDIKVMVDREAFERRTRSDKSARLTRVKSMVNLRSEALHRSLVEMLLKKRLFNTVDAMENIGYQKP 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5691363 5694532 - Cp4.1LG10g07510.1 Cpe10g00999 476536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g00999 397 SUPERFAMILY Protein kinase-like (PK-like) 18 241 IPR011009 -
Cpe10g00999 397 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 181 - -
Cpe10g00999 397 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 182 301 - -
Cpe10g00999 397 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 4 181 - -
Cpe10g00999 397 Gene3D Phosphorylase Kinase; domain 1 3 98 - -
Cpe10g00999 397 ProSiteProfiles Protein kinase domain profile. 17 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00999 397 SMART serkin_6 17 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00999 397 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 305 397 - -
Cpe10g00999 397 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 305 397 - -
Cpe10g00999 397 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 182 301 - -
Cpe10g00999 397 Pfam Protein kinase domain 21 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g00999 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cpe10g00999 397 Gene3D Transferase(Phosphotransferase) domain 1 100 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe09g01001 Cpe-Chr9:8877785 Cpe10g00999 Cpe-Chr10:5691363 5.47E-97 dispersed
Cpe10g00999 Cpe-Chr10:5691363 Cpe20g00266 Cpe-Chr20:1491133 1.34E-98 dispersed
Cpe05g00778 Cpe-Chr5:4821817 Cpe10g00999 Cpe-Chr10:5691363 2.64E-47 transposed
Cpe10g00999 Cpe-Chr10:5691363 Cpe05g01001 Cpe-Chr5:6540824 7.99E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62676 PF00069 Pkinase 1.90E-32 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g00999 K08867 - csv:101207665 406.371