Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01002 ATGGGTGGGGCCTCTGATCTCTCTGCTTCTCTACTTCCTTTCATCAATTCCGAGACGATAACCCTTCTCTTTCATCCCTTATTACAGATATTTATGACATCTGATCAGCCCCTGCTGGCTTCATCAGAATCCCCATCTCAAAATCGTGGTTCCTTTGGTTGTCTATGTCGCAGTGCTTCTTTTACCTCTTCCAGTTACGACGATTCTCAGAATGACATTGTGCATGTGAAGGAAAACTGCGTCAGCCCTTTTGGAGATAACACTTGGATGAGAATTGTCTCAAGAAGTTCCACTTCGCTATCTAGGAAGAGGCAGTTTTATACTGTTGGCTCTCTGTTTTCCTCAGCATGGGGTGCAATGGAGCTACATAATATTAATGATAACCCTGCAAGCTTTGAACTCTCTAGGGTCCAGGAGAAGTTACATAAGGCACAAAGAAGTCGTCATAAAAGTATACAGTTTGAGGATAATTTACAGCATGACGATAATCCTAGGTTGATATACATCAATGATCCAAGGAGAACTAATGATAAGTATGAGTTCACAGGAAATGAGATAACCACCAGCAAGTATACATTGATTACCTTCTTGCCAAAGAATCTCTTTATTCAGTTCCATAGGGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCACCTTTGGCAGTCTTTGGGAGAACGGTATCTCTTTTCCCCCTCCTGTTTGTGCTATGTGTTACAGCTATTAAAGATGGCTATGAGGATTGGCGTAGACATAGATCTGATCGTAATGAGAACAATAGACAGGCTCTCGTGCTTCAATCCGATGAATTCCGATTGAAAGTGTGGAAAAAAATACGAGCAGGTGAAGTTGTGAAGATCTGTGCAGACGAGGTCATTCCTTGTGACATGGTTTTATTGGGGACAAGTGACCCTAGTGGCCTTGCTTACATACAAACAATGAATTTGGACGGTGAATCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACAGCATTTGCAGTAGCTGAGGGGTGTTCATATTCTGGTCTTATTCGATGTGAACAACCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAGTTCAACAACCATAAATTTCCCCTCAGCCAGTCGAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACTGAATGGATTATTGGGGTGGTTGTCTATGCTGGACAAGAGACAAAAGCCATGTTAAACAGTGCAATGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACATTGTGGTTGTCAATCTTCCTCTTTGTCATGTGTCTAGTTGTGGCCCTTGGAATGGGGTTATGGCTTGTTCGGCACAAGGAACAGCTTGATACCTTGCCATATTATAGGAAAAGGTATTTCACAAATGGGGCCGACGATGGTAAGAAGTACAGGTTTTATGGAATACCTATGGAGACCTTTTTCTCCTTTTTGAGTTCTATTATAGTGTTCCAGATTATGATACCGATATCCCTTTATATTACAATGGAGATGGTGAGACTGGGGCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGCAGAATCTCTTGCTCAAGGTTTCAGTGTAGATCATTGAATATCAATGAGGATCTTGGTCAAGTTCGCTACGTATTTTCTGATAAAACAGGAACACTTACTGAAAATAAGATGGAATTTAAAAGAGCAAGTGTGAACGGGAAGAATTACGGGAACAACTTGACTGAGGGTTATTCATCAATGTATTCCATTCCAGCAACTATAGGGGGGAGGAGGAGGAAACTTAAATCTGAAGTTGCTGTTGATATTGAACTTCTCAAATTATTGCACAAGGACCTAAATGGAGATGAAAAGATTGCTGCACATGAATTTTTTCTTACATTGGCTGCATGCAATACTGTAATTCCTATTCTCATGGATGACAAATCTGGTTATGAAAATGGTGAATTGCACGAGGATGTTGAAACTATTGGTTATCAGGGGGAATCCCCTGACGAGCAGGCACTAGTTGCTGCAGCCGCTGCTTATGGATATACACTTTTTGAGCGCACGTCTGGGCATATTGTTATAGATGTCAATGGTGAGAACTTAAGGTTGGATGTTTTGGGTTTACATGAGTTTGATAGCGTTCGCAAAAGAATGTCTGTTGTCATCAGATTCCCTGACAATACTATAAAGGTGCTGGTAAAAGGTGCCGATACTTCGATGTTGAGTATTTTAGGCAATGACTCTGATAGGGAAGAATTTATAAAGCATGCTACTCGATGCCATTTGAGTGAATATTCAATGGAAGGTTTGCGAACACTTGTAGTTGCTGCTAGAGACCTGAAAGATTCTGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGCACTTCACTGACTGAAAGAGCAGTAAAACTACGTCAGACAGCAGCCCTTATAGAATGTGATCTAAAGCTTTTGGGTGCAACTGCTATTGAGGACAAGCTTCAAGACGGTGTACCTGAAGCCATTGAATCTCTTCGGCAGGCTGGAATAAAGGTCTGGATTCTGACTGGAGATAAGCAGGAGACAGCCATATCAATCGGTCTCTCCTGCAAATTGCTGACTCCTGATATGCAGTCAATTATTGTCAATGGAAATTCCGAGTATGATTGCAGGAAACTTTTAGCTGATGCTATTGAAAAATATGGTATTAAATCAACACAGGGCAGAAGTCATACACAGAAGATGAATTGTGAGAATGAAGGCCATGATGCACCAAAGACATCCAGTATGTCAGATTTTAATGAAGAGAAAGAAGAAGTGACCGATAAACCACTAGCTCTAATAATTGATGGAAACAGTTTGCTTTTTGAGCTTGCAACTTCATGCAACGTTGTGCTATGCTGTCGTGTCGCTCCTTTGCAGAAAGCTGGAATTGTTGATCTGATTAAGAGTAGAACTGATGATATGACATTGGCAATTGGCGATGGGGCCAATGATGTCTCAATGATTCAGATGGCCGATGTAGGCGTTGGTATATGTGGACAGGAAGGGCGTCAAGCGGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTAAAAAGATTACTTCTAGTGCATGGACATTGGAACTATCAACGTGTAGGCTACATGGTTCTATACAACTTCTACCGCAATGCTGTTTTCGTCTTGATGCTCTTCTGGTACATCCTATGCACAGCGTTCTCAACAACTTCAGCTTTGACTGATTGGAGTAGTGTGTTTTACTCTGTTATTTATACGTCTATCCCCACTATTTTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAAACCCTACTCCAATATCCTAAGCTCTATGGTGCTGGCTATAGACAGGAGGCATACAATTTGCGTCTCTTTTGGTTCACAATGATTGATACCCTTTGGCAGAGTCTTGTTCTCTTCTATGTGCCATTATTCATTTACAAGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTTTGTGGACCATAGCTGTTGTTATCCTTGTGAACGTACACTTAGCGATGGATGTTCAACGTTGGGTATATATTACACATGCTGCAGTCTGGGGATCCATAGTCATAACGACGATCTTTCATCTGGCTAAGTCCCCAACCTATTGGTTGTCTATATTGCTCATAATAGTTGTTGCATTGCTTCCACGCTATCTTTTTAAAGTTGTGCACCAAAGATTCTGGCCCTCGGACATTCAGATAGCCAGAGAAGCCGAGGTACTGAGAAAACGAAAAGGTCGTGAACAGTTTAGTTCAAAGCAAGAAACCAGTTCAAAACAGAAGATCAAGTCTGGAGCGTGA 3837 41.44 MGGASDLSASLLPFINSETITLLFHPLLQIFMTSDQPLLASSESPSQNRGSFGCLCRSASFTSSSYDDSQNDIVHVKENCVSPFGDNTWMRIVSRSSTSLSRKRQFYTVGSLFSSAWGAMELHNINDNPASFELSRVQEKLHKAQRSRHKSIQFEDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVLQSDEFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETAFAVAEGCSYSGLIRCEQPNRNIYEFTANMEFNNHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAMSPAKRSKLEGYMNRETLWLSIFLFVMCLVVALGMGLWLVRHKEQLDTLPYYRKRYFTNGADDGKKYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRISCSRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFKRASVNGKNYGNNLTEGYSSMYSIPATIGGRRRKLKSEVAVDIELLKLLHKDLNGDEKIAAHEFFLTLAACNTVIPILMDDKSGYENGELHEDVETIGYQGESPDEQALVAAAAAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTIKVLVKGADTSMLSILGNDSDREEFIKHATRCHLSEYSMEGLRTLVVAARDLKDSEFELWQSRYEDASTSLTERAVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTPDMQSIIVNGNSEYDCRKLLADAIEKYGIKSTQGRSHTQKMNCENEGHDAPKTSSMSDFNEEKEEVTDKPLALIIDGNSLLFELATSCNVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSHKTLLQYPKLYGAGYRQEAYNLRLFWFTMIDTLWQSLVLFYVPLFIYKESSIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITTIFHLAKSPTYWLSILLIIVVALLPRYLFKVVHQRFWPSDIQIAREAEVLRKRKGREQFSSKQETSSKQKIKSGA 1278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5751796 5759146 - Cp4.1LG10g07410.1 Cpe10g01002 476539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01002 1278 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 181 1249 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe10g01002 1278 Pfam Phospholipid-translocating P-type ATPase C-terminal 1019 1242 IPR032630 -
Cpe10g01002 1278 SFLD p-type atpase 537 1042 IPR044492 -
Cpe10g01002 1278 Gene3D - 665 803 IPR023299 GO:0000166
Cpe10g01002 1278 CDD P-type_ATPase_APLT_Dnf-like 183 1151 - -
Cpe10g01002 1278 ProSitePatterns E1-E2 ATPases phosphorylation site. 555 561 IPR018303 -
Cpe10g01002 1278 SUPERFAMILY HAD-like 540 1036 IPR036412 -
Cpe10g01002 1278 SUPERFAMILY Calcium ATPase, transduction domain A 264 406 IPR008250 -
Cpe10g01002 1278 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 156 1268 - -
Cpe10g01002 1278 Gene3D - 243 410 - -
Cpe10g01002 1278 Gene3D - 820 1031 IPR023214 -
Cpe10g01002 1278 Gene3D - 563 583 IPR023299 GO:0000166
Cpe10g01002 1278 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 559 836 IPR023299 GO:0000166
Cpe10g01002 1278 Pfam E1-E2 ATPase 264 511 - -
Cpe10g01002 1278 Gene3D - 533 549 - -
Cpe10g01002 1278 Gene3D - 550 562 IPR023214 -
Cpe10g01002 1278 SFLD Haloacid Dehalogenase 537 1042 - -
Cpe10g01002 1278 MobiDBLite consensus disorder prediction 1258 1278 - -
Cpe10g01002 1278 MobiDBLite consensus disorder prediction 907 934 - -
Cpe10g01002 1278 SUPERFAMILY Calcium ATPase, transmembrane domain M 181 1241 IPR023298 -
Cpe10g01002 1278 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 486 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe10g01002 1278 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 961 1077 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe10g01002 1278 Pfam Phospholipid-translocating ATPase N-terminal 167 232 IPR032631 -
Cpe10g01002 1278 Pfam haloacid dehalogenase-like hydrolase 550 864 - -
Cpe10g01002 1278 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 156 1268 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe10g01002 Cpe19g00155 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02161 Cpe-Chr1:18463254 Cpe10g01002 Cpe-Chr10:5751796 0 dispersed
Cpe04g00807 Cpe-Chr4:7610368 Cpe10g01002 Cpe-Chr10:5751796 3.53E-156 dispersed
Cpe10g01002 Cpe-Chr10:5751796 Cpe13g00729 Cpe-Chr13:6703696 0 dispersed
Cpe10g01002 Cpe-Chr10:5751796 Cpe19g00155 Cpe-Chr19:1247702 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01002 K14802 - csv:101206692 2190.23