Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe10g01006 | ATGAAGGAAATTCATAAGTTCCGTCTTGCATTTGCATTTGCATCGATCTCTGTTTTCGTTTGCTTGTTCTTCGATGTTCATGTGGTTTTAGCAGACAATTACGTTCCCCGGGATTTCATCCTCCTCGATTGTGGAGGGCCTTCGACTGCCAACGACGTCGATAATCGGAAATGGATGACCGATGACAAATCCAAGTTTATTCCAGCGAGGGGGAATAGCACCGTATCGAAAGCCGCTACCCAGGATCCTTCTGTTCCTGATATCCCTTTCATGACGGCTAGGGTTTTCAGCTCTAATTTCACCTACAGCTTTCCTGTGGCCCCTAGTCGTTTATTCGTTCGTCTCTACTTTTACCCTTCTTCTTATAGTGGCCTTAATGCATCTGATGCTCTTTTCTCTGTCTCCACTCAATCCTATACCCTTCTTAAAAACTTCAGCGCTGCACAAACTGCCGAGGCTTTGAATTTTGCTTATATCATTAAGGAATACTCGATCTATGTTGAAGATGGATGGTTGAACTTGACTTTCGTTCCATCCTCCAGTCATCCAAAGGCCTATGCATTTGTGAATGGGATTGAGATTGTATCCATGGCTGATATTTACAGCGATACTTCTGGGACTCTTCTGCTCGATGTAGTTTACAAAGGCAAGAAGGATCTAGATGCTTCCCCAGGCATCGATGGAAACATAACCGACTCGAGAAGCACCGGAATCAGTATGAGCATCGGAAGCCGAAGCCTTGCCAGTGAAGATTCGGACGGGTTGACGCCGAGTGCTGTATTCTCACAGATCATGAACCCAAAAGGTCGTTAA | 813 | 45.26 | MKEIHKFRLAFAFASISVFVCLFFDVHVVLADNYVPRDFILLDCGGPSTANDVDNRKWMTDDKSKFIPARGNSTVSKAATQDPSVPDIPFMTARVFSSNFTYSFPVAPSRLFVRLYFYPSSYSGLNASDALFSVSTQSYTLLKNFSAAQTAEALNFAYIIKEYSIYVEDGWLNLTFVPSSSHPKAYAFVNGIEIVSMADIYSDTSGTLLLDVVYKGKKDLDASPGIDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR | 270 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 5778642 | 5781338 | + | Cp4.1LG10g07470.1 | Cpe10g01006 | 476543 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe10g01006 | 270 | PANTHER | OSJNBA0013K16.18 PROTEIN | 18 | 206 | - | - | |
| Cpe10g01006 | 270 | Pfam | Malectin-like domain | 42 | 214 | IPR024788 | - | |
| Cpe10g01006 | 270 | Gene3D | - | 39 | 199 | - | - | |
| Cpe10g01006 | 270 | PANTHER | OS03G0124300 PROTEIN-RELATED | 18 | 206 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe10g01006 | Cpe-Chr10:5778642 | Cpe03g00974 | Cpe-Chr3:7837785 | 4.04E-37 | dispersed | |
| Cpe10g01006 | Cpe-Chr10:5778642 | Cpe19g00157 | Cpe-Chr19:1276782 | 1.17E-27 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe10g01006 | - | - | csv:101211171 | 362.844 |