Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01009 ATGAGGCTACCTTCCCTTTTTGCACCATTTTTACTCTTACTTTCCTTCATTGAGGCTGATCTAAACTCGGACAAGCAAGCTCTTCTCGAGTTTATTTCGACCGTTCCCCACGGTCGAAAAATCAACTGGGATCCCTCTACCCCGGTCTGCACGGCTTGGGTTGGCATCATGTGCACTTCCAACCTCTCTAATGTGCTTGCTCTCAGGCTGCCTGCTGTTGGACTGTATGGTCCGATACCCGCCAATACACTTGGAAAGTTAGGCGCTCTTAGAACCTTGAGTCTTCGATCTAACAATCTTAATGGGAACGTTCCATCGGATGTGCTATCCCTTCCCTCCCTAAAGTTTATATATCTTCAACACAATAACTTTTCTGGTCAAATATCTTCTTCCCTGTCTCCTAGCCTTACCTTCCTTGATCTGTCGTTCAACTCTCTCACGGGAAACATTCCGACATCGATACAAAATCTCACACAGCTCACTAGCCTCAATGTTCAAAACAACTCCCTGACCGGATCCGTTCCTGATATCGGTCACCTAAAGCTTAAACTATTGAACGTGAGCTACAACCATCTTAGCGGCCGTATTCCCGCTTCACTGCAATCATTTCCTCCTTCTTCCTTTGAAGGGAACTCACTGCTATGTGGCTCACCTCTGAAAAATTGCTCACTTGGTGCTCCCTTACCTTCTCCATCTCCCACTTCTTTGACCCGGCCGAAGAACGAAAAGAGAATAAACATTGGAGCCATCGTTGCCATTGCCTTGGGTGGTTCTGCATTGCTCTTCCTCGTCACGATATTGATTGTCGTCTGTCGTATAAAGAAAAAAGATGGCGAAGTTAGTACCGTTGCTGCGAAAGGAAAGGGCAAAAGGAGTGAGCAACCAAAGGAGGATTTCGGAAGCGGGGTACAAGAGCCCGAGAAAAATAGGCTCGTGTTCTTTGAAGGCTGTTCGTATAACTTTGATCTCGAGGACTTGTTAAGGGCCTCCGCCGAAGTACTCGGTAAAGGGAGTTACGGGACTACTTACAAGGCGATCTTGGAGGATGGAATTACAGTGGTAGTAAAGAGGTTGAAGGAAGTGGTAGCTGGGAAGAAGGATTTTGATCAACAAATGGAGATTGTTGGGAGAATCGGCCAGCATCCGAACGTCGTGCCTCTCCGTGCCTATTACTATTCGAAAGACGAGAAGCTTTTAGTTTACGATCACGCCATTGCTGGAAGCTTTTCCTCATTACTCCATGGAAGCCGAGACGGTGGAAGAGGGCCACCGGACTGGGAAACTCGAGTGAAGGTTTCACTTGGGTGTGCCAAAGGCCTTGCACATATCCATTCATCAAGTGGGGGAAAATTGATCCATGGCAACATAAAGTCCTCTAACATCCTTCTTACACAAGACATGAATGGTTGTATTTCAGATTTTGGCTTGACTCCTTTGATGAACTCTCCAATCATTCCCTCTAGAAGCGTAAGTTATCGTGCTCCAGAGGTGATCGAGACTCGAAAGTCAACTCAAAAGTCAGACATTTACAGTTTCGGAGTCGTTTTGCTCGAGATGTTGACTGGGAAAGCGCCATCCCAATCGCCTGGCCGTGACGATGTCATGGACCTTCCTAGATGGGTCCAATCTGTGGTTAGAGAAGAATGGACATCTGAGGTATTTGATGTAGAACTAATGAAGTATCAGAACATTGAAGAAGAGCTGGTTCAAATGCTCCAAATCGCAATGGCGTGTGTGTCACGAGTGCCAGATATGAGACCAACGATGGAGGAAGTTGTTAGGATGATCGAGGAAATCCGACCATCTGACTCGGGAACTCGACCATCATCAGAAGATAACAAAGACGGAGACGGGGACGGGGACGGAGACGATGACTTGAATACTCCGAACTGA 1893 46.91 MRLPSLFAPFLLLLSFIEADLNSDKQALLEFISTVPHGRKINWDPSTPVCTAWVGIMCTSNLSNVLALRLPAVGLYGPIPANTLGKLGALRTLSLRSNNLNGNVPSDVLSLPSLKFIYLQHNNFSGQISSSLSPSLTFLDLSFNSLTGNIPTSIQNLTQLTSLNVQNNSLTGSVPDIGHLKLKLLNVSYNHLSGRIPASLQSFPPSSFEGNSLLCGSPLKNCSLGAPLPSPSPTSLTRPKNEKRINIGAIVAIALGGSALLFLVTILIVVCRIKKKDGEVSTVAAKGKGKRSEQPKEDFGSGVQEPEKNRLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEDGITVVVKRLKEVVAGKKDFDQQMEIVGRIGQHPNVVPLRAYYYSKDEKLLVYDHAIAGSFSSLLHGSRDGGRGPPDWETRVKVSLGCAKGLAHIHSSSGGKLIHGNIKSSNILLTQDMNGCISDFGLTPLMNSPIIPSRSVSYRAPEVIETRKSTQKSDIYSFGVVLLEMLTGKAPSQSPGRDDVMDLPRWVQSVVREEWTSEVFDVELMKYQNIEEELVQMLQIAMACVSRVPDMRPTMEEVVRMIEEIRPSDSGTRPSSEDNKDGDGDGDGDDDLNTPN 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5791475 5795510 - Cp4.1LG10g07360.1 Cpe10g01009 476546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01009 630 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Cpe10g01009 630 PANTHER OS05G0480400 PROTEIN 10 615 - -
Cpe10g01009 630 SUPERFAMILY Protein kinase-like (PK-like) 332 597 IPR011009 -
Cpe10g01009 630 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01009 630 CDD STKc_IRAK 334 599 - -
Cpe10g01009 630 Gene3D Ribonuclease Inhibitor 21 179 IPR032675 -
Cpe10g01009 630 Gene3D Phosphorylase Kinase; domain 1 296 403 - -
Cpe10g01009 630 PANTHER OS05G0588300 PROTEIN 10 615 - -
Cpe10g01009 630 MobiDBLite consensus disorder prediction 616 630 - -
Cpe10g01009 630 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01009 630 Pfam Leucine Rich Repeat 181 203 IPR001611 GO:0005515
Cpe10g01009 630 Pfam Leucine Rich Repeat 135 157 IPR001611 GO:0005515
Cpe10g01009 630 Gene3D Transferase(Phosphotransferase) domain 1 406 619 - -
Cpe10g01009 630 MobiDBLite consensus disorder prediction 597 630 - -
Cpe10g01009 630 MobiDBLite consensus disorder prediction 597 615 - -
Cpe10g01009 630 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Cpe10g01009 630 Gene3D Ribonuclease Inhibitor 180 223 IPR032675 -
Cpe10g01009 630 SUPERFAMILY L domain-like 34 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01150 Cpe-Chr4:9863766 Cpe10g01009 Cpe-Chr10:5791475 0 dispersed
Cpe07g00990 Cpe-Chr7:9019304 Cpe10g01009 Cpe-Chr10:5791475 5.36E-13 dispersed
Cpe10g01009 Cpe-Chr10:5791475 Cpe11g01095 Cpe-Chr11:9123791 0 dispersed
Cpe14g00178 Cpe-Chr14:998526 Cpe10g01009 Cpe-Chr10:5791475 3.18E-57 dispersed
Cpe20g00161 Cpe-Chr20:907565 Cpe10g01009 Cpe-Chr10:5791475 1.10E-140 dispersed
Cpe16g00693 Cpe-Chr16:7154115 Cpe10g01009 Cpe-Chr10:5791475 0 transposed
Cpe10g01009 Cpe-Chr10:5791475 Cpe19g00159 Cpe-Chr19:1294424 1.16E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62679 PF00069 Pkinase 8.60E-36 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01009 - - csv:101210437 1047.73