Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01013 ATGAGGAGGGATCGTGTGTGCGTTTTTCTGCTCTTGTGTTGCTGCTCTGTGCTACTTTCTGGTGCTGCAATCACAGAGCCATCTGATGTTGAAGCATTGCTAACAGTAAAGAGGAGTCTGATTGATCCTATGGACAATCTTAAAAATTGGAATAATGGAGATCCTTGCACAACGAATTGGACTGGAGTAGTATGTAGCGTTTTCGATGGAGCTGTCGGGAACTTACGTGTCAAAGAACTCCAGCTACTGAATATGAACCTATCTGGAAACTTAGCCCCTGAGATCAGCCAATTGTCTCAGCTTGAGAATTTAAATTTCATGTGGAATAACCTAACTGGTTTAATTCCGAAGGAGATTGGCAGTATGAGGCCGCTGAAACTTCTGCTCTTAAATGGAAATAAATTCTCCGGTTCTCTTCCGGATGAGCTTGGTAATCTTACAAATCTCAAACGATTTCAAATAGATGAGAATCAAATTTCAGGGCATATCCCAAAATCATATGCCAACTTGACCCATATGAAGCACCTCCACTTCAATAACAACACTTTAAGTGGTGAAATTCCATCTGAGCTTTCCAGATTACACAATCTTCTTCACTTGCTTTTGGATAACAATAACTTATCGGGTTCTCTGCCACCAGAATTTTCGTCCTTGCCAAAGCTAAGCATTCTGCAACTTGATAACAACAACTTAGAAGGTGAAATTCCAGCTTCTTATGAAGAATTTCCTACATTAGTGAAATTAAGTCTGAGGAATTGCAGCTTGGAGGGGCCGATTCCTAATTTCAGCAAAATTGCAAACCTCAGTTACTTGGATCTTAGCTGGAACCATTTTACTGGACCCATACCACCATATAACCTCTCTTCTAATATGACAACAATAATTTTGTCACACAACCAGCTGAATGGATCTATACCCAGAAGTTTCTCCAATCTTCATAATCTCCAGAAACTGTCACTTGAGAGTAACTTTTTGAATGGTTCGGTACCTGCATTATGGGAGAAAATGTCCTTCAATTCAAGTGCTCGCCTTACACTTGATCTTCGGAACAATTCGTTTTCTGACATTTCTGGAAGCACAAACCCTCCAGCTAATGTCACCCTAAGGCTTGGAGGAAATCCATTCTGCCAAAATTTGAACCGACAAAACTCTGACCTGTTCTGTACGTCTAAAATTGTAGAGGACCAGCTGCATAGAAGCTCGAAGAACTCCAATGAAACATGTCGAAGTTGTCCAACAGATAGTTTCTTTGAATACGTTCCAGACACTCCTGACCCGTGCTTTTGTGCATCACCTCTTGGTATTGGATATAGGCTGAAGAGTCCAAGTTTTTCCTACTTTCCTCCTTACATATATTCATTTCAAGCGTATCTGACAAAGGAACTCAGTTTGGATAAGCAGCAATTGTTAATCGATTCATACGTTTGGGAAGGATCTCGCCTGAGGATGTATCTAAAGATATTCCCATTATTTGATAGTGGTACTCATGTGTTGGATCAAAGTAAGGTATTTCAAATTACAGAAAAGTTTATGTCATGGAATTTCACTCGTGATGACTTTTTTGGCCCATATGAGCTTCTCAACTTCACACTCCCTGGCCATCATCAGACTGTCATTTTCCAGACAGTGAAAACGGGCATTGGTGCGGGCATCCTGGCTGCCATTGTAGTTGGATCTATTACCTGCATTCTTATGATAGTAACGGTAGCCATACTTCTATTCACTAGGCATTCAAGATACCATCGCAATTTATCAAGGAAAAAGTTCTCTTCAAAGATTGGTCTGAAAATTGATGGTGTAAAAGCATTTTCATTCAAGGAAATGCAATCGGCTACTGGAAATTTCAACCGCTCAACTCAAGTTGGCCAAGGAGGTTATGGCAAGGTCTATAAAGGCATATTGTCAGATAATTCAGTTGTCGCCATCAAGCGTGCAGAAGAAGGATCCTTACAAGGACAAAAAGAATTCTTGACGGAGATAGAACTCTTATCACGGTTGCATCACCGAAACTTAGTTTCGCTGATCGGATATTGTGATGAAGCAGGAGAACAAATGCTGGTTTACGAGTTTATGCCAAATGGAACTTTGCGGGACTGGCTTTCTGGCTTTGAATTTTCTGCCAAAAGTAGAACGACCGTAAATCTGAATTTTCGTATGAGATTACAAATTGCACTGGGTTCAGCTAAAGGTATACTGTATCTCCATACTGAAGCAAATCCTCCTATATTTCACCGAGACATCAAAGCTAGAAACATACTCCTCGACGCCAAGCTCACAGCCAAAGTGGCTGATTTCGGATTATCACGTCTTGCTCCCGATCTAGATTTCGAGGGGGATGTTCCTGGACATATATCTACTGTTGTGAAGGGTACCCCAGGTTATCTTGATCCAGAGTACTTTTTAACCCGTAAATTGACGGATAAAAGTGATGTCTATAGCCTAGGAGTTGTGTTATTGGAGCTCTTGACGGGAATGCACCCTATATCTTGTTGCCATGACAAGCCAGAAGAGCGGCCATCCATGCTGGTTGTAGTGAGGGAGCTGGAGAACATACTGTACATGATGCCTGACGACAGTGGCGCCTTGTATTCAGACCCGTCCCTGAGATCAAGTGCCGGTCTTCCCTCACCAGTTTCAACGTCGTCCTGCATCACCCGAGACCGGTTTGCATCGGGAAGCATGTCGGGGAGTGATCTCATCAGCGGCGTCGTCCCAACCATCGCCCCTCGCTGA 2733 42.41 MRRDRVCVFLLLCCCSVLLSGAAITEPSDVEALLTVKRSLIDPMDNLKNWNNGDPCTTNWTGVVCSVFDGAVGNLRVKELQLLNMNLSGNLAPEISQLSQLENLNFMWNNLTGLIPKEIGSMRPLKLLLLNGNKFSGSLPDELGNLTNLKRFQIDENQISGHIPKSYANLTHMKHLHFNNNTLSGEIPSELSRLHNLLHLLLDNNNLSGSLPPEFSSLPKLSILQLDNNNLEGEIPASYEEFPTLVKLSLRNCSLEGPIPNFSKIANLSYLDLSWNHFTGPIPPYNLSSNMTTIILSHNQLNGSIPRSFSNLHNLQKLSLESNFLNGSVPALWEKMSFNSSARLTLDLRNNSFSDISGSTNPPANVTLRLGGNPFCQNLNRQNSDLFCTSKIVEDQLHRSSKNSNETCRSCPTDSFFEYVPDTPDPCFCASPLGIGYRLKSPSFSYFPPYIYSFQAYLTKELSLDKQQLLIDSYVWEGSRLRMYLKIFPLFDSGTHVLDQSKVFQITEKFMSWNFTRDDFFGPYELLNFTLPGHHQTVIFQTVKTGIGAGILAAIVVGSITCILMIVTVAILLFTRHSRYHRNLSRKKFSSKIGLKIDGVKAFSFKEMQSATGNFNRSTQVGQGGYGKVYKGILSDNSVVAIKRAEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCDEAGEQMLVYEFMPNGTLRDWLSGFEFSAKSRTTVNLNFRMRLQIALGSAKGILYLHTEANPPIFHRDIKARNILLDAKLTAKVADFGLSRLAPDLDFEGDVPGHISTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVLLELLTGMHPISCCHDKPEERPSMLVVVRELENILYMMPDDSGALYSDPSLRSSAGLPSPVSTSSCITRDRFASGSMSGSDLISGVVPTIAPR 910
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 5826319 5838652 + Cp4.1LG10g07440.1 Cpe10g01013 476550
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01013 910 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 829 - -
Cpe10g01013 910 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 829 878 - -
Cpe10g01013 910 Gene3D Ribonuclease Inhibitor 182 284 IPR032675 -
Cpe10g01013 910 Gene3D Ribonuclease Inhibitor 285 414 IPR032675 -
Cpe10g01013 910 Pfam Protein kinase domain 616 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01013 910 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 829 - -
Cpe10g01013 910 Gene3D Phosphorylase Kinase; domain 1 586 690 - -
Cpe10g01013 910 Gene3D Transferase(Phosphotransferase) domain 1 691 859 - -
Cpe10g01013 910 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 829 878 - -
Cpe10g01013 910 SUPERFAMILY L domain-like 25 284 - -
Cpe10g01013 910 SUPERFAMILY Protein kinase-like (PK-like) 600 878 IPR011009 -
Cpe10g01013 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Cpe10g01013 910 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Cpe10g01013 910 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Cpe10g01013 910 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Cpe10g01013 910 SMART serkin_6 615 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01013 910 ProSiteProfiles Protein kinase domain profile. 615 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01013 910 SUPERFAMILY L domain-like 238 378 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01113 Cpe-Chr2:10186832 Cpe10g01013 Cpe-Chr10:5826319 7.79E-10 dispersed
Cpe02g01114 Cpe-Chr2:10190787 Cpe10g01013 Cpe-Chr10:5826319 7.49E-52 dispersed
Cpe10g01013 Cpe-Chr10:5826319 Cpe15g00892 Cpe-Chr15:8578801 3.34E-28 dispersed
Cpe17g00942 Cpe-Chr17:7241712 Cpe10g01013 Cpe-Chr10:5826319 9.20E-20 dispersed
Cpe18g00357 Cpe-Chr18:4971009 Cpe10g01013 Cpe-Chr10:5826319 4.63E-32 dispersed
Cpe19g00163 Cpe-Chr19:1335949 Cpe10g01013 Cpe-Chr10:5826319 4.00E-30 dispersed
Cpe20g00276 Cpe-Chr20:1549162 Cpe10g01013 Cpe-Chr10:5826319 2.14E-23 dispersed
Cpe20g00916 Cpe-Chr20:8097339 Cpe10g01013 Cpe-Chr10:5826319 6.53E-46 dispersed
Cpe02g01112 Cpe-Chr2:10175514 Cpe10g01013 Cpe-Chr10:5826319 7.61E-41 transposed
Cpe20g00915 Cpe-Chr20:8089511 Cpe10g01013 Cpe-Chr10:5826319 1.40E-07 transposed
Cpe10g01013 Cpe-Chr10:5826319 Cpe19g00162 Cpe-Chr19:1324274 9.36E-81 wgd
Cpe10g01013 Cpe-Chr10:5826319 Cpe03g00001 Cpe-Chr3:21 2.13E-103 wgd
Cpe10g01013 Cpe-Chr10:5826319 Cpe08g01270 Cpe-Chr8:9167132 1.44E-06 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62680 PF00069 Pkinase 2.10E-41 CL0016 Cpe PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01013 - - bhj:120073192 1499.95