Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g01013 | ATGAGGAGGGATCGTGTGTGCGTTTTTCTGCTCTTGTGTTGCTGCTCTGTGCTACTTTCTGGTGCTGCAATCACAGAGCCATCTGATGTTGAAGCATTGCTAACAGTAAAGAGGAGTCTGATTGATCCTATGGACAATCTTAAAAATTGGAATAATGGAGATCCTTGCACAACGAATTGGACTGGAGTAGTATGTAGCGTTTTCGATGGAGCTGTCGGGAACTTACGTGTCAAAGAACTCCAGCTACTGAATATGAACCTATCTGGAAACTTAGCCCCTGAGATCAGCCAATTGTCTCAGCTTGAGAATTTAAATTTCATGTGGAATAACCTAACTGGTTTAATTCCGAAGGAGATTGGCAGTATGAGGCCGCTGAAACTTCTGCTCTTAAATGGAAATAAATTCTCCGGTTCTCTTCCGGATGAGCTTGGTAATCTTACAAATCTCAAACGATTTCAAATAGATGAGAATCAAATTTCAGGGCATATCCCAAAATCATATGCCAACTTGACCCATATGAAGCACCTCCACTTCAATAACAACACTTTAAGTGGTGAAATTCCATCTGAGCTTTCCAGATTACACAATCTTCTTCACTTGCTTTTGGATAACAATAACTTATCGGGTTCTCTGCCACCAGAATTTTCGTCCTTGCCAAAGCTAAGCATTCTGCAACTTGATAACAACAACTTAGAAGGTGAAATTCCAGCTTCTTATGAAGAATTTCCTACATTAGTGAAATTAAGTCTGAGGAATTGCAGCTTGGAGGGGCCGATTCCTAATTTCAGCAAAATTGCAAACCTCAGTTACTTGGATCTTAGCTGGAACCATTTTACTGGACCCATACCACCATATAACCTCTCTTCTAATATGACAACAATAATTTTGTCACACAACCAGCTGAATGGATCTATACCCAGAAGTTTCTCCAATCTTCATAATCTCCAGAAACTGTCACTTGAGAGTAACTTTTTGAATGGTTCGGTACCTGCATTATGGGAGAAAATGTCCTTCAATTCAAGTGCTCGCCTTACACTTGATCTTCGGAACAATTCGTTTTCTGACATTTCTGGAAGCACAAACCCTCCAGCTAATGTCACCCTAAGGCTTGGAGGAAATCCATTCTGCCAAAATTTGAACCGACAAAACTCTGACCTGTTCTGTACGTCTAAAATTGTAGAGGACCAGCTGCATAGAAGCTCGAAGAACTCCAATGAAACATGTCGAAGTTGTCCAACAGATAGTTTCTTTGAATACGTTCCAGACACTCCTGACCCGTGCTTTTGTGCATCACCTCTTGGTATTGGATATAGGCTGAAGAGTCCAAGTTTTTCCTACTTTCCTCCTTACATATATTCATTTCAAGCGTATCTGACAAAGGAACTCAGTTTGGATAAGCAGCAATTGTTAATCGATTCATACGTTTGGGAAGGATCTCGCCTGAGGATGTATCTAAAGATATTCCCATTATTTGATAGTGGTACTCATGTGTTGGATCAAAGTAAGGTATTTCAAATTACAGAAAAGTTTATGTCATGGAATTTCACTCGTGATGACTTTTTTGGCCCATATGAGCTTCTCAACTTCACACTCCCTGGCCATCATCAGACTGTCATTTTCCAGACAGTGAAAACGGGCATTGGTGCGGGCATCCTGGCTGCCATTGTAGTTGGATCTATTACCTGCATTCTTATGATAGTAACGGTAGCCATACTTCTATTCACTAGGCATTCAAGATACCATCGCAATTTATCAAGGAAAAAGTTCTCTTCAAAGATTGGTCTGAAAATTGATGGTGTAAAAGCATTTTCATTCAAGGAAATGCAATCGGCTACTGGAAATTTCAACCGCTCAACTCAAGTTGGCCAAGGAGGTTATGGCAAGGTCTATAAAGGCATATTGTCAGATAATTCAGTTGTCGCCATCAAGCGTGCAGAAGAAGGATCCTTACAAGGACAAAAAGAATTCTTGACGGAGATAGAACTCTTATCACGGTTGCATCACCGAAACTTAGTTTCGCTGATCGGATATTGTGATGAAGCAGGAGAACAAATGCTGGTTTACGAGTTTATGCCAAATGGAACTTTGCGGGACTGGCTTTCTGGCTTTGAATTTTCTGCCAAAAGTAGAACGACCGTAAATCTGAATTTTCGTATGAGATTACAAATTGCACTGGGTTCAGCTAAAGGTATACTGTATCTCCATACTGAAGCAAATCCTCCTATATTTCACCGAGACATCAAAGCTAGAAACATACTCCTCGACGCCAAGCTCACAGCCAAAGTGGCTGATTTCGGATTATCACGTCTTGCTCCCGATCTAGATTTCGAGGGGGATGTTCCTGGACATATATCTACTGTTGTGAAGGGTACCCCAGGTTATCTTGATCCAGAGTACTTTTTAACCCGTAAATTGACGGATAAAAGTGATGTCTATAGCCTAGGAGTTGTGTTATTGGAGCTCTTGACGGGAATGCACCCTATATCTTGTTGCCATGACAAGCCAGAAGAGCGGCCATCCATGCTGGTTGTAGTGAGGGAGCTGGAGAACATACTGTACATGATGCCTGACGACAGTGGCGCCTTGTATTCAGACCCGTCCCTGAGATCAAGTGCCGGTCTTCCCTCACCAGTTTCAACGTCGTCCTGCATCACCCGAGACCGGTTTGCATCGGGAAGCATGTCGGGGAGTGATCTCATCAGCGGCGTCGTCCCAACCATCGCCCCTCGCTGA | 2733 | 42.41 | MRRDRVCVFLLLCCCSVLLSGAAITEPSDVEALLTVKRSLIDPMDNLKNWNNGDPCTTNWTGVVCSVFDGAVGNLRVKELQLLNMNLSGNLAPEISQLSQLENLNFMWNNLTGLIPKEIGSMRPLKLLLLNGNKFSGSLPDELGNLTNLKRFQIDENQISGHIPKSYANLTHMKHLHFNNNTLSGEIPSELSRLHNLLHLLLDNNNLSGSLPPEFSSLPKLSILQLDNNNLEGEIPASYEEFPTLVKLSLRNCSLEGPIPNFSKIANLSYLDLSWNHFTGPIPPYNLSSNMTTIILSHNQLNGSIPRSFSNLHNLQKLSLESNFLNGSVPALWEKMSFNSSARLTLDLRNNSFSDISGSTNPPANVTLRLGGNPFCQNLNRQNSDLFCTSKIVEDQLHRSSKNSNETCRSCPTDSFFEYVPDTPDPCFCASPLGIGYRLKSPSFSYFPPYIYSFQAYLTKELSLDKQQLLIDSYVWEGSRLRMYLKIFPLFDSGTHVLDQSKVFQITEKFMSWNFTRDDFFGPYELLNFTLPGHHQTVIFQTVKTGIGAGILAAIVVGSITCILMIVTVAILLFTRHSRYHRNLSRKKFSSKIGLKIDGVKAFSFKEMQSATGNFNRSTQVGQGGYGKVYKGILSDNSVVAIKRAEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCDEAGEQMLVYEFMPNGTLRDWLSGFEFSAKSRTTVNLNFRMRLQIALGSAKGILYLHTEANPPIFHRDIKARNILLDAKLTAKVADFGLSRLAPDLDFEGDVPGHISTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVLLELLTGMHPISCCHDKPEERPSMLVVVRELENILYMMPDDSGALYSDPSLRSSAGLPSPVSTSSCITRDRFASGSMSGSDLISGVVPTIAPR | 910 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 5826319 | 5838652 | + | Cp4.1LG10g07440.1 | Cpe10g01013 | 476550 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g01013 | 910 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 6 | 829 | - | - | |
Cpe10g01013 | 910 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 829 | 878 | - | - | |
Cpe10g01013 | 910 | Gene3D | Ribonuclease Inhibitor | 182 | 284 | IPR032675 | - | |
Cpe10g01013 | 910 | Gene3D | Ribonuclease Inhibitor | 285 | 414 | IPR032675 | - | |
Cpe10g01013 | 910 | Pfam | Protein kinase domain | 616 | 834 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g01013 | 910 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 6 | 829 | - | - | |
Cpe10g01013 | 910 | Gene3D | Phosphorylase Kinase; domain 1 | 586 | 690 | - | - | |
Cpe10g01013 | 910 | Gene3D | Transferase(Phosphotransferase) domain 1 | 691 | 859 | - | - | |
Cpe10g01013 | 910 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 829 | 878 | - | - | |
Cpe10g01013 | 910 | SUPERFAMILY | L domain-like | 25 | 284 | - | - | |
Cpe10g01013 | 910 | SUPERFAMILY | Protein kinase-like (PK-like) | 600 | 878 | IPR011009 | - | |
Cpe10g01013 | 910 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 742 | 754 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe10g01013 | 910 | ProSitePatterns | Protein kinases ATP-binding region signature. | 621 | 643 | IPR017441 | GO:0005524 | |
Cpe10g01013 | 910 | Pfam | Leucine rich repeat N-terminal domain | 27 | 66 | IPR013210 | - | |
Cpe10g01013 | 910 | Gene3D | Ribonuclease Inhibitor | 27 | 181 | IPR032675 | - | |
Cpe10g01013 | 910 | SMART | serkin_6 | 615 | 900 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g01013 | 910 | ProSiteProfiles | Protein kinase domain profile. | 615 | 910 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g01013 | 910 | SUPERFAMILY | L domain-like | 238 | 378 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g01113 | Cpe-Chr2:10186832 | Cpe10g01013 | Cpe-Chr10:5826319 | 7.79E-10 | dispersed | |
Cpe02g01114 | Cpe-Chr2:10190787 | Cpe10g01013 | Cpe-Chr10:5826319 | 7.49E-52 | dispersed | |
Cpe10g01013 | Cpe-Chr10:5826319 | Cpe15g00892 | Cpe-Chr15:8578801 | 3.34E-28 | dispersed | |
Cpe17g00942 | Cpe-Chr17:7241712 | Cpe10g01013 | Cpe-Chr10:5826319 | 9.20E-20 | dispersed | |
Cpe18g00357 | Cpe-Chr18:4971009 | Cpe10g01013 | Cpe-Chr10:5826319 | 4.63E-32 | dispersed | |
Cpe19g00163 | Cpe-Chr19:1335949 | Cpe10g01013 | Cpe-Chr10:5826319 | 4.00E-30 | dispersed | |
Cpe20g00276 | Cpe-Chr20:1549162 | Cpe10g01013 | Cpe-Chr10:5826319 | 2.14E-23 | dispersed | |
Cpe20g00916 | Cpe-Chr20:8097339 | Cpe10g01013 | Cpe-Chr10:5826319 | 6.53E-46 | dispersed | |
Cpe02g01112 | Cpe-Chr2:10175514 | Cpe10g01013 | Cpe-Chr10:5826319 | 7.61E-41 | transposed | |
Cpe20g00915 | Cpe-Chr20:8089511 | Cpe10g01013 | Cpe-Chr10:5826319 | 1.40E-07 | transposed | |
Cpe10g01013 | Cpe-Chr10:5826319 | Cpe19g00162 | Cpe-Chr19:1324274 | 9.36E-81 | wgd | |
Cpe10g01013 | Cpe-Chr10:5826319 | Cpe03g00001 | Cpe-Chr3:21 | 2.13E-103 | wgd | |
Cpe10g01013 | Cpe-Chr10:5826319 | Cpe08g01270 | Cpe-Chr8:9167132 | 1.44E-06 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62680 | PF00069 | Pkinase | 2.10E-41 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g01013 | - | - | bhj:120073192 | 1499.95 |