Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01027 ATGGCTGCCTACGCTTTGCTTGGCGATTCCACTGGACGTGTTAATGGCGGTTTTGATGATAGTCCTTTGACGAGTGCATCGACGAACAGTAACGGCAGTGAAGAACGTAATCATCAACAGACTGTTCAAGTTCAGGTTATTCAGTCGCGAAAAATGGTGCGGAAGAGAATCGCGTCGGAGATGGAGATCGACGGCGGTGGAGTCACTGCATCTGTTCATTCTCGGCTTTCGCGGCGGAGTTTAGGTTCTGATCGTCCTTTTGCTTGTGGAGAAATTAAAGGGAATGTGAATTATTGTTCTTCTTCAAACCCTAGCCATGGCGGTAACCACTCCACTGTGCATAATTTAACCGCTCTGACGTCAGGTGTAATCGAAGGGACAAATTTATCAAATCCTCCTTCTGCTTCTGATGCTACGGCCTCTTCCACTACCTCCAACAATAACAATAACAACAACGCGACTCTTCTTGATAGTACTCTTCCTGTTCTTCGTCCTCAGCCCCACCATCACTTGCAGAATCCTGCAGTCTGTGGTTTCTCTGGTTTGCCGTTGTTCCCACCGGAATCGAATCACCACCACAAGTTAAATACTCGGAGTAATCCTTTTCCCCTTCCTAATCCATCTCAGATTCTTCTTCATAATCCTCCTACTACTGCAACATCCTCCATTATCGCCGCCGCTTCTTCTCCCATGGATGATTCCTCCGCCACCGCTTGGATCGACGGCATCATTAAGGACTTAATCCACAGCTCCACCGCCATATCCATTCCTCAGCTTATTCAGAACGTACGTGAGATTATCTACCCCTGTAACCCCAATCTTGCGAACCTTCTTGAGTTTCGTCTTCGTACTTTGACGGAACCTAGTGTTCCTAACTTCGTTGCTGAGGATCATCGATTGAGGAAATCCACTTTGCCGTTGCCGGCGCCGTTGGCCGCGCTGGGGTTGCAGCAGAGGCAGTTCAATCAAGAACAGCATGAGCAAGAGCATGATTGTTCTGGTTTGAAGCTTAATCTCGATTCTTCTTCTCTGCATAATTTTCCTACTTTCCCCTCTCAGCCACAGTTTCATGAGCCGTATCTTCACTGGGGAGCAACCACTCCGCCAGTCCCCACCCCCTCCGGCGAGGATGCCTTACAGCGGCTCCCCGGTCATCATCAACTTAATCTCTCTTCTGTTACACCGTCGTCGCTTGTTTCTCTAAACCATGTCCCTTCAAAGCCACAATCAGAACAGCAGAACTCCTGTCCGGTGAATGTAAAGGCGGCGGTGGCACAGCCGCCGACAGCGGCAGCGGCTGCGGCAGCGCCACAGCCGAGTAATAACCCTTCAGCCACTGCTTTGCTAATTAGAGAGATAAAAGAGGAGATGAGGCAACAGAAGAGAGACGAAGAAGGGTTACATCTCTTGACATTACTTCTTCAATGTGCCGAAGCCGTTTCTGCTGATAATTTAGAAGAAGCCAACAAGATGCTCTTGGAAATCTCCGAGTTGTCCACACCCTTCGGCACATCGGCACAGAGGGTAGCGGCGTATTTCTCAGAAGCAATGTCGGCGAGGCTTGTAAGCTCATGTTTAGGCATTTATGCAGCTCTGCCGCCATCGTTGATGCCCCATACCCACAGCCAGAAGATAGCTTCAGCCTTCCAGGTCTTCAATGGCATAAGCCCATTTGTCAAATTCTCACACTTCACTGCCAATCAAGCCATACAAGAAGCTTTTGAAAGGGAAGAGAGAGTTCACATCATAGATCTAGACATCATGCAAGGCCTTCAATGGCCTGGTCTCTTCCACATCTTGGCGTCTAGGCCTGGCGGGCCGCCGTATGTCCGCCTTACAGGGCTAGGGACCTCTCAGCAAGTTCTTGAGGCCACTGGCAAACGCCTCACTGAATTCGCGGAGAAGCTAGGCCTTCCCTTCGATTTCTTCCCTGTGGCTGATAAAATTGGCAATTTAGACTTGGAGAGGCTCAACGTGAGCAAAAGGGAAGCCGTTGCCGTTCATTGGATGCAGCACTCTCTTTATGAAGTCACTGGTTCTGATTCCAATACGCTATGGCTTTTGCAGAGATTGGCCCCAAAAGTGGTGACGGTGGTGGAACAAGATCTAAGCCACACAGGCTCGTTCTTGGGGAGATTCGTAGAGGCCATTCACTACTATTCCGCACTATTTGACTCATTGGGTGTCAGCTATGGCGAAGAGAGTGAAGAGAGACACTTAGTGGAGCAGCAACTTTTGTCAAGGGAGATCAGAAACGTGCTGGCCGTGGGTGGGCCGTCGAGGACCGGCGAAGTAAAGTTCCAAAACTGGAGAGAAAAGCTACGGCAATCTGGGTTTAAGGGCATTTCTCTCGCCGGAAATGCTGCAACTCAGGCCACTCTCCTCCTCGGAATGTTCCCTTCCGATGGGTACACGCTTGTAGAAGATCATGGGACTCTGAAACTTGGATGGAAGGATCTTTGTTTGCTCACAGCCTCAGCTTGGAAGCCGCCGTTTCATCATCATGCCGCCGCCGCCGCTGCACCGGCCACCAACAACAACCACATTCCACGGTACTGA 2559 50.14 MAAYALLGDSTGRVNGGFDDSPLTSASTNSNGSEERNHQQTVQVQVIQSRKMVRKRIASEMEIDGGGVTASVHSRLSRRSLGSDRPFACGEIKGNVNYCSSSNPSHGGNHSTVHNLTALTSGVIEGTNLSNPPSASDATASSTTSNNNNNNNATLLDSTLPVLRPQPHHHLQNPAVCGFSGLPLFPPESNHHHKLNTRSNPFPLPNPSQILLHNPPTTATSSIIAAASSPMDDSSATAWIDGIIKDLIHSSTAISIPQLIQNVREIIYPCNPNLANLLEFRLRTLTEPSVPNFVAEDHRLRKSTLPLPAPLAALGLQQRQFNQEQHEQEHDCSGLKLNLDSSSLHNFPTFPSQPQFHEPYLHWGATTPPVPTPSGEDALQRLPGHHQLNLSSVTPSSLVSLNHVPSKPQSEQQNSCPVNVKAAVAQPPTAAAAAAAPQPSNNPSATALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPSLMPHTHSQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQQVLEATGKRLTEFAEKLGLPFDFFPVADKIGNLDLERLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRTGEVKFQNWREKLRQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDHGTLKLGWKDLCLLTASAWKPPFHHHAAAAAAPATNNNHIPRY 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 5952091 5955673 + Cp4.1LG10g07230.1 Cpe10g01027 476564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01027 852 MobiDBLite consensus disorder prediction 17 40 - -
Cpe10g01027 852 ProSiteProfiles GRAS family profile. 460 829 IPR005202 -
Cpe10g01027 852 MobiDBLite consensus disorder prediction 124 155 - -
Cpe10g01027 852 MobiDBLite consensus disorder prediction 15 40 - -
Cpe10g01027 852 Pfam GRAS domain family 470 829 IPR005202 -
Cpe10g01027 852 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 831 IPR005202 -
Cpe10g01027 852 PANTHER PROTEIN SCARECROW 139 831 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00556 Cpe-Chr1:3215741 Cpe10g01027 Cpe-Chr10:5952091 2.27E-159 dispersed
Cpe10g01027 Cpe-Chr10:5952091 Cpe17g01142 Cpe-Chr17:8666537 8.21E-112 dispersed
Cpe10g01027 Cpe-Chr10:5952091 Cpe19g00183 Cpe-Chr19:1489557 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50164 PF03514 GRAS 6.60E-127 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01027 - - bhj:120074183 1396.72