Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01037 ATGGCTCGATCATTTTTCTTATTTAAGCACCGATTGTTTACATTTGAAGCGAACCCAGATTCCGAAGAACAGCCTGAAGAAATCGAAATCTCTCCTAAGGTTGTTGACCTATTTCCGGTTGCACCTTCGATTTCCCTTTTGTTCAATTATTTTCCGGCGATAATCATGATCGATGCTATTAAGGGTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGCGCTTCGTCTCTTGGAGTTCTTACCTCCGTCCTGTATTCGGTTGCTGGTGTTTATGGCATTCCGCTTCACCCGCTTTTTATCACTACTACTCTCGTTTTCGTTCTTGTTTTTGTTTTTAATATAATTGGCGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGCTACTGCCGCTTTCTATGCTGCTGGCGTTGGTCCGACCTCTCTCCTCTCCATGGCTCTCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCTGTGGCGATCAAGGAGGTGATGCCAATACAATACAAGCACATGCTTGGTGGACCTACTCTAAAAGTTGACATTCATTCTGGAGCCACAGCTGAAGGAGTTTTGACTTTTCTAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGAGGCCCTTCCAACCCAGTTATTCAAACATGGTTGCTGGCAGTGGCTACCGTAGCATTAATCGTCGCTGGTTCCGAGTACACAGGACCTTCCATGAATCCTGCAAATGCGTTTGGATGGGCATATCTAAACAACACGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCGCCCCGTTCATAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCAGCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGA 897 47.49 MARSFFLFKHRLFTFEANPDSEEQPEEIEISPKVVDLFPVAPSISLLFNYFPAIIMIDAIKGAIGDAVLTSMWIFCASSLGVLTSVLYSVAGVYGIPLHPLFITTTLVFVLVFVFNIIGAALGGASFNPTATAAFYAAGVGPTSLLSMALRFPAQAAGAVAGAVAIKEVMPIQYKHMLGGPTLKVDIHSGATAEGVLTFLISFAVLLIVLRGPSNPVIQTWLLAVATVALIVAGSEYTGPSMNPANAFGWAYLNNTHDTWEQLYVYWIAPFIGAILAAWLFRIIFPPPAPAPAKQKKA 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6046978 6050745 - Cp4.1LG10g07020.1 Cpe10g01037 476574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01037 298 Gene3D Glycerol uptake facilitator protein. 54 293 IPR023271 -
Cpe10g01037 298 PANTHER AQUAPORIN SIP1-1 58 297 IPR044222 GO:0015250
Cpe10g01037 298 Pfam Major intrinsic protein 59 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g01037 298 SUPERFAMILY Aquaporin-like 56 294 IPR023271 -
Cpe10g01037 298 PRINTS Major intrinsic protein family signature 193 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g01037 298 PRINTS Major intrinsic protein family signature 108 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g01037 298 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g01037 298 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g01037 298 PRINTS Major intrinsic protein family signature 147 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g01037 298 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cpe10g01037 298 PANTHER AQUAPORIN SIP1-1 58 297 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00425 Cpe10g01037 CCT
Cpe10g01037 Cpe19g00188 CCT
Cpe08g01357 Cpe10g01037 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01037 Cpe-Chr10:6046978 Cpe10g00216 Cpe-Chr10:1223766 1.45E-11 dispersed
Cpe10g01037 Cpe-Chr10:6046978 Cpe19g00188 Cpe-Chr19:1531992 2.29E-141 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01037 K09875 - csv:101220534 406.757