Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g01037 | ATGGCTCGATCATTTTTCTTATTTAAGCACCGATTGTTTACATTTGAAGCGAACCCAGATTCCGAAGAACAGCCTGAAGAAATCGAAATCTCTCCTAAGGTTGTTGACCTATTTCCGGTTGCACCTTCGATTTCCCTTTTGTTCAATTATTTTCCGGCGATAATCATGATCGATGCTATTAAGGGTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGCGCTTCGTCTCTTGGAGTTCTTACCTCCGTCCTGTATTCGGTTGCTGGTGTTTATGGCATTCCGCTTCACCCGCTTTTTATCACTACTACTCTCGTTTTCGTTCTTGTTTTTGTTTTTAATATAATTGGCGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGCTACTGCCGCTTTCTATGCTGCTGGCGTTGGTCCGACCTCTCTCCTCTCCATGGCTCTCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCTGTGGCGATCAAGGAGGTGATGCCAATACAATACAAGCACATGCTTGGTGGACCTACTCTAAAAGTTGACATTCATTCTGGAGCCACAGCTGAAGGAGTTTTGACTTTTCTAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGAGGCCCTTCCAACCCAGTTATTCAAACATGGTTGCTGGCAGTGGCTACCGTAGCATTAATCGTCGCTGGTTCCGAGTACACAGGACCTTCCATGAATCCTGCAAATGCGTTTGGATGGGCATATCTAAACAACACGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCGCCCCGTTCATAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCAGCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGA | 897 | 47.49 | MARSFFLFKHRLFTFEANPDSEEQPEEIEISPKVVDLFPVAPSISLLFNYFPAIIMIDAIKGAIGDAVLTSMWIFCASSLGVLTSVLYSVAGVYGIPLHPLFITTTLVFVLVFVFNIIGAALGGASFNPTATAAFYAAGVGPTSLLSMALRFPAQAAGAVAGAVAIKEVMPIQYKHMLGGPTLKVDIHSGATAEGVLTFLISFAVLLIVLRGPSNPVIQTWLLAVATVALIVAGSEYTGPSMNPANAFGWAYLNNTHDTWEQLYVYWIAPFIGAILAAWLFRIIFPPPAPAPAKQKKA | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 6046978 | 6050745 | - | Cp4.1LG10g07020.1 | Cpe10g01037 | 476574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g01037 | 298 | Gene3D | Glycerol uptake facilitator protein. | 54 | 293 | IPR023271 | - | |
Cpe10g01037 | 298 | PANTHER | AQUAPORIN SIP1-1 | 58 | 297 | IPR044222 | GO:0015250 | |
Cpe10g01037 | 298 | Pfam | Major intrinsic protein | 59 | 281 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g01037 | 298 | SUPERFAMILY | Aquaporin-like | 56 | 294 | IPR023271 | - | |
Cpe10g01037 | 298 | PRINTS | Major intrinsic protein family signature | 193 | 211 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g01037 | 298 | PRINTS | Major intrinsic protein family signature | 108 | 132 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g01037 | 298 | PRINTS | Major intrinsic protein family signature | 61 | 80 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g01037 | 298 | PRINTS | Major intrinsic protein family signature | 224 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g01037 | 298 | PRINTS | Major intrinsic protein family signature | 147 | 166 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g01037 | 298 | PRINTS | Major intrinsic protein family signature | 264 | 284 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe10g01037 | 298 | PANTHER | AQUAPORIN SIP1-1 | 58 | 297 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00425 | Cpe10g01037 | CCT | |
Cpe10g01037 | Cpe19g00188 | CCT | |
Cpe08g01357 | Cpe10g01037 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g01037 | Cpe-Chr10:6046978 | Cpe10g00216 | Cpe-Chr10:1223766 | 1.45E-11 | dispersed | |
Cpe10g01037 | Cpe-Chr10:6046978 | Cpe19g00188 | Cpe-Chr19:1531992 | 2.29E-141 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g01037 | K09875 | - | csv:101220534 | 406.757 |