Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01062 ATGGCGACCAATTTCTGGTCCTTGGCATGTATTCGGAGTCAGAATAGCGCCAATCTAACGCCGCGCCCTCATTATCCGTCTATGCCGAAATATCCAGCTGGGGTTTCGTTGCTGGAGAATAGCTTTCCGATGACTGAATCCACGGCGTTCTTCTCCGTCATCGGCATGACTTGCTCTGCTTGTGCTGGCTCTGTTGAGAAGGCGATCAAACGTCTCCCTGGGATTCGTGAAGCTGTTGTTGATGTTTTGAATGGCAAAGCTCGAGTCCAGTTTTACCCTAGCTTCGTTGATGTGGATCAAGTATGTGAGGCAATTAACGATGCAGGCTTTGAAGCAAGTATACTCAATGATGATATGATTGAAAGATGTCGAATTCATGTAATTGGAATGACTTGTACATCTTGTTCCACAACTTTGGAATCTACATTACAAGCAATTCGTGGAGTTCAAAATGCTCAAGTAGCATTAGCCACGGAAGAGGCAGAAATTTGTTACAACCCAAGGATTTTGAACTACAATCAACTTCTCCAAGCCATTGAAGATTCTGGATTTGAAGCCTTACTTGTTAGCACAGAAGAAGATGTGAGCAAGATACAGCTCCAAGTTGATGGAGTGAGATCTGAGAATTCAATGAGATTGATTGGTAGCTCTCTGGAAGCACTTCCTGGAGTTCTAGGTATTGATATTGATCCTTCACTCAGCAAAATTTCCTTGTCTTATAAGCCAAATGTCACGGGACCTCGGAATATAATCCAAGTGATCGAATCAACTGGGTCGGGTCAAATTAAAGCAACAATATTTCCTGAAGAACAGGGCAGAGATGCCTATAAAAAGGAGGAAATTAAGCAATATTACAGATCATTCTTATGGAGTTTGATATTTACAATTCCAGTATTTTTAAGCTCCATGGTCTTCACTTATATACCTGGTATTAAGGATGGGTTGGATACCAAAATTGTCAATATGATGACTGTTGGAGAGCTTCTGAGGTGGGTGTTAGCAACTCCTGTACAGTTCATCATTGGAAGGCGATTCTATACTGGATCTTACAAAGCGTTGCGTCATGGATCTGCAAATATGGACGTTTTGATTGCTTTGGGCACAAATGCAGCATACTTTTATTCAGTGTACATGGTCTTAAGATCTGCAACCTCGAGTGATTTTAAAGCCACGGATTTCTTTGAAACCAGTTCCATGCTAATTTCATTCATTCTCCTCGGGAAATATCTCGAGGTCTTGGCGAAGGGAAAGACATCAGACGCTATTGCCAAGCTTATGAAGTTGGTGCCTGAAACAGCAACCTTGCTTACTTTTGATAATGATGGAAGGGTCATTAGGGAAGATGAAATTGATAGCCGATTGATACAAAAGAATGATGTAATTAAAGTCATTCCTGGTGCAAAGGTTGCTTCAGATGGAGTTGTTGTTTGGGGACAAAGTCATGTCAATGAAAGCATGATTACTGGGGAAGCCAAGCCAGTGGCGAAGAGACAGGATGATTCAGTGATTGGAGGCACCTTGAATGAGAACGGAGTGCTACATGTGAGGGCGACACACGTTGGATCTGAAAGTGCTCTTTCGCAGATTGTTCGTCTCGTCGAATCAGCTCAGATGGCGAAGGCTCCAGTTCAGAAAATTGCAGATCGTATCTCTAAGTTTTTTGTGCCAATGGTTAGTAAGTCTTGCTCTAACTTTTCTATAATAACTGCAAAATCTGCTCCTGAGGTTATAGTACTTTCATTGACAACATGGCTCATCTGGTTTCTCACTGGGAAGTATGGTGGCTACCCAAGGACCTGGATACCTTCTTCCATGGATAGCTTTGAGCTTGCTCTCCAGTTTGGTATTTCAGTAATGGTCATAGCATGCCCTTGTGCTTTGGGCCTGGCAACTCCAACTGCTGTCATGGTTGGAACGGGAGTTGGTGCATCAAAAGGTGTTTTAATCAAAGGTGGCCAAGCATTGGAGAGCGCTCACAAGGTGAATTGCATTGTGTTTGACAAGACTGGAACTCTGACAGTCGGGAAGCCAGTTGTGGTGAACACTAAACTACTGAAAAATATGGCTCTCAAAGATTTCTATGAACTAGTCGCCGCCACTGAGGTAAACAGCGAGCATCCATTGGCTAAAGCCGTTGTTGAATATGCTAAAAAGTTCAAAGAAGAAGACGATAACCAAACTTGGCCTGAAGCACTAGACTTTATCTCCATTACTGGACATGGAGTTAAGGCCATCGTTCAAAACAAAGAAGTACTTGCAGGCAACAAGAGTCTCATGTTAGATCAGAACATCCTCATACCTGTTGAAGCTGAAGAAATATTAAAAGAAATCGAAGAACTGGCTCATACTGGAATTTTGGTATCCATTGATAGGAAATTGACAGGGGTTCTTGCCATATCTGATCCACTAAAACCGAGTGCTCGCGAGGTCATTTCGATACTCAAGGCCATGAAAGTTAAATCCATCATGGTTACAGGTGATAATTGGGGGACGGCGAAGTCCATAGCCAATGAGGTTGGGATTGATGATGTAATTGCAGAAGCTAAACCAGACCAGAAAGCAGATGAAGTGAAGAAATTACAGACTTTGGGTCATACGGTGGCAATGGTGGGAGATGGGATCAACGACTCACCGGCGCTTGTGGCTGCAGATGTTGGAATGGCAATTGGTGCAGGCACAGACATCGCCATTGAGGCAGCTGACATAGTTCTTATGAAAAGCAACTTGGAGGATGTCATAACAGCCATCGACCTTTCAAGGAAAACGTTTTCCAGGATCCGTCTGAACTACGTTTGGGCGCTCGGTTACAATCTCCTCGGTATCCCTATTGCAGCAGGAGTCCTATTCCCATCAACTCGATTTCGGTTACCGCCATGGATTGCAGGAGCAGCAATGGCTGCCTCTTCTGTTAGTGTTGTTTGCAGTTCTCTCCTGCTCAAGTATTACAAAAGACCCAAGAAGCTTGATGCCCTTGACATTCAAGGCATTAGAGTTGAGTGA 3000 43.5 MATNFWSLACIRSQNSANLTPRPHYPSMPKYPAGVSLLENSFPMTESTAFFSVIGMTCSACAGSVEKAIKRLPGIREAVVDVLNGKARVQFYPSFVDVDQVCEAINDAGFEASILNDDMIERCRIHVIGMTCTSCSTTLESTLQAIRGVQNAQVALATEEAEICYNPRILNYNQLLQAIEDSGFEALLVSTEEDVSKIQLQVDGVRSENSMRLIGSSLEALPGVLGIDIDPSLSKISLSYKPNVTGPRNIIQVIESTGSGQIKATIFPEEQGRDAYKKEEIKQYYRSFLWSLIFTIPVFLSSMVFTYIPGIKDGLDTKIVNMMTVGELLRWVLATPVQFIIGRRFYTGSYKALRHGSANMDVLIALGTNAAYFYSVYMVLRSATSSDFKATDFFETSSMLISFILLGKYLEVLAKGKTSDAIAKLMKLVPETATLLTFDNDGRVIREDEIDSRLIQKNDVIKVIPGAKVASDGVVVWGQSHVNESMITGEAKPVAKRQDDSVIGGTLNENGVLHVRATHVGSESALSQIVRLVESAQMAKAPVQKIADRISKFFVPMVSKSCSNFSIITAKSAPEVIVLSLTTWLIWFLTGKYGGYPRTWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASKGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVNTKLLKNMALKDFYELVAATEVNSEHPLAKAVVEYAKKFKEEDDNQTWPEALDFISITGHGVKAIVQNKEVLAGNKSLMLDQNILIPVEAEEILKEIEELAHTGILVSIDRKLTGVLAISDPLKPSAREVISILKAMKVKSIMVTGDNWGTAKSIANEVGIDDVIAEAKPDQKADEVKKLQTLGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLLGIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLLLKYYKRPKKLDALDIQGIRVE 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6338078 6343743 + Cp4.1LG10g10980.1 Cpe10g01062 476599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01062 999 CDD P-type_ATPase_Cu-like 286 966 - -
Cpe10g01062 999 Pfam haloacid dehalogenase-like hydrolase 661 884 - -
Cpe10g01062 999 ProSiteProfiles Heavy-metal-associated domain profile. 197 258 IPR006121 GO:0046872
Cpe10g01062 999 Pfam Heavy-metal-associated domain 125 185 IPR006121 GO:0046872
Cpe10g01062 999 Pfam Heavy-metal-associated domain 51 111 IPR006121 GO:0046872
Cpe10g01062 999 ProSiteProfiles Heavy-metal-associated domain profile. 48 114 IPR006121 GO:0046872
Cpe10g01062 999 SUPERFAMILY HAD-like 664 976 IPR036412 -
Cpe10g01062 999 SUPERFAMILY Calcium ATPase, transduction domain A 449 533 IPR008250 -
Cpe10g01062 999 Gene3D - 43 114 - -
Cpe10g01062 999 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 601 952 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe10g01062 999 PRINTS P-type cation-transporting ATPase superfamily signature 893 905 - -
Cpe10g01062 999 PRINTS P-type cation-transporting ATPase superfamily signature 665 679 - -
Cpe10g01062 999 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Cpe10g01062 999 PRINTS P-type cation-transporting ATPase superfamily signature 483 497 - -
Cpe10g01062 999 PRINTS P-type cation-transporting ATPase superfamily signature 795 806 - -
Cpe10g01062 999 PRINTS P-type cation-transporting ATPase superfamily signature 817 827 - -
Cpe10g01062 999 CDD HMA 51 113 IPR006121 GO:0046872
Cpe10g01062 999 Gene3D - 196 258 - -
Cpe10g01062 999 PRINTS Copper-transporting ATPase 1 signature 103 123 - -
Cpe10g01062 999 PRINTS Copper-transporting ATPase 1 signature 145 166 - -
Cpe10g01062 999 PRINTS Copper-transporting ATPase 1 signature 48 73 - -
Cpe10g01062 999 PRINTS Copper-transporting ATPase 1 signature 74 97 - -
Cpe10g01062 999 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 360 979 IPR027256 GO:0006812|GO:0016021|GO:0019829
Cpe10g01062 999 ProSitePatterns Heavy-metal-associated domain. 127 156 IPR017969 GO:0046872
Cpe10g01062 999 Gene3D - 120 193 - -
Cpe10g01062 999 ProSiteProfiles Heavy-metal-associated domain profile. 122 188 IPR006121 GO:0046872
Cpe10g01062 999 SUPERFAMILY Calcium ATPase, transmembrane domain M 392 938 IPR023298 -
Cpe10g01062 999 SUPERFAMILY HMA, heavy metal-associated domain 47 117 IPR036163 GO:0046872
Cpe10g01062 999 Gene3D - 415 537 - -
Cpe10g01062 999 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 990 - -
Cpe10g01062 999 ProSitePatterns Heavy-metal-associated domain. 53 82 IPR017969 GO:0046872
Cpe10g01062 999 Gene3D - 632 927 IPR023214 -
Cpe10g01062 999 ProSitePatterns E1-E2 ATPases phosphorylation site. 667 673 IPR018303 -
Cpe10g01062 999 CDD HMA 127 186 IPR006121 GO:0046872
Cpe10g01062 999 SFLD C1.7: P-type atpase like 647 922 - -
Cpe10g01062 999 PANTHER ATP7, ISOFORM B 1 990 - -
Cpe10g01062 999 SUPERFAMILY HMA, heavy metal-associated domain 120 194 IPR036163 GO:0046872
Cpe10g01062 999 SUPERFAMILY HMA, heavy metal-associated domain 192 259 IPR036163 GO:0046872
Cpe10g01062 999 CDD HMA 199 258 IPR006121 GO:0046872
Cpe10g01062 999 TIGRFAM TIGR00003: copper ion binding protein 51 112 IPR006122 GO:0005507
Cpe10g01062 999 Gene3D - 751 801 IPR023299 GO:0000166
Cpe10g01062 999 Gene3D - 672 750 IPR023299 GO:0000166
Cpe10g01062 999 SFLD p-type atpase 647 922 IPR044492 -
Cpe10g01062 999 Pfam E1-E2 ATPase 428 644 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00327 Cpe-Chr5:1821319 Cpe10g01062 Cpe-Chr10:6338078 0 dispersed
Cpe05g01159 Cpe-Chr5:7875287 Cpe10g01062 Cpe-Chr10:6338078 0 dispersed
Cpe10g01062 Cpe-Chr10:6338078 Cpe19g01198 Cpe-Chr19:8043954 1.01E-14 dispersed
Cpe10g01062 Cpe-Chr10:6338078 Cpe19g00213 Cpe-Chr19:1745088 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01062 K17686 - csv:101218801 1744.94