Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01086 ATGGATCTCTCACAGTCTTTAGATCCGCAAGTCCTTCTGGGTTTGGCTGTGGCTGTTTTAGCCCTTGCCGTTGGTGCTCTCTATGTATTATCCTCGTCTAAAAAAAGCAAATCCAGAGAGGTATTCAAGGAGTTTAAACTTATCAAACGCGTGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCAAATCCTACTTCAGTTTTGGGTCTTCCCATTGGACAACATATCAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTCATCAAACCGTACACACCGATTACTTTAGATTCTGATGTTGGTTATTTTGAGCTCGTCATAAAGATGTATCCCCAAGGAAGGATGTCGCATCATTTCCGACAGATGCGTGTTGGCGATTTTCTTGCTGTAAAGGGGCCCAAGGGGCGTTTCAGGTATCAACCTGGGCAGGTCCGAGCATTTGGGATGCTCGCTGGAGGCTCCGGCATTACTCCTATGTATCAAGTTGCTCGAGCAATATTAGAAAATCCGAACGACGAGACGAAGGTACACCTCATCTATGCCAATGTCACCTATGAGGACATTCTTTTAAAGGAGGAGTTGGATCTTCTTGCCAAAAGGTACCCAGATAGCTTCAAGCTCTACTATGTCTTAAACCAGCCTCCTGAAGAATGGGATGGTGGTGTCGGATTCGTATCGAAGGAGATGATTCAAACCCACTGCCCCGCTCCTGCTTCTGATATTCAGGTTTTAAGATGTGGGCCACCACCAATGAACAAGGCCATGGGTGCTCATCTTGAAGCTCTTGGATATGCACCTGAGATGCTGTTCATGTTCTGA 831 46.57 MDLSQSLDPQVLLGLAVAVLALAVGALYVLSSSKKSKSREVFKEFKLIKRVQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDETKVHLIYANVTYEDILLKEELDLLAKRYPDSFKLYYVLNQPPEEWDGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMGAHLEALGYAPEMLFMF 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6608643 6614364 + Cp4.1LG10g10810.1 Cpe10g01086 476623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01086 276 PRINTS Cytochrome B5 reductase signature 93 100 - -
Cpe10g01086 276 PRINTS Cytochrome B5 reductase signature 246 254 - -
Cpe10g01086 276 PRINTS Cytochrome B5 reductase signature 71 82 - -
Cpe10g01086 276 PRINTS Cytochrome B5 reductase signature 152 171 - -
Cpe10g01086 276 PRINTS Cytochrome B5 reductase signature 190 201 - -
Cpe10g01086 276 PRINTS Cytochrome B5 reductase signature 129 143 - -
Cpe10g01086 276 Gene3D Translation factors 37 134 - -
Cpe10g01086 276 CDD cyt_b5_reduct_like 45 276 - -
Cpe10g01086 276 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 40 144 IPR017927 GO:0016491
Cpe10g01086 276 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 132 275 IPR039261 -
Cpe10g01086 276 Pfam Oxidoreductase NAD-binding domain 153 258 IPR001433 GO:0016491
Cpe10g01086 276 PANTHER NADH-CYTOCHROME B5 REDUCTASE 5 276 - -
Cpe10g01086 276 SUPERFAMILY Riboflavin synthase domain-like 40 145 IPR017938 -
Cpe10g01086 276 PANTHER NADH-CYTOCHROME B5 REDUCTASE 5 276 IPR001834 GO:0016491
Cpe10g01086 276 Gene3D - 135 276 IPR039261 -
Cpe10g01086 276 Pfam Oxidoreductase FAD-binding domain 45 143 IPR008333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01365 Cpe-Chr8:9811681 Cpe10g01086 Cpe-Chr10:6608643 6.57E-159 dispersed
Cpe10g01086 Cpe-Chr10:6608643 Cpe16g00938 Cpe-Chr16:8657691 7.02E-123 dispersed
Cpe10g01086 Cpe-Chr10:6608643 Cpe19g00231 Cpe-Chr19:1918564 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01086 K00326 - csv:101212569 490.345