Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01098 ATGGGCAAAAACGACGGAGAACAGCCACCGCAGTCCGCCGTCGGCTCCAGGCCATCAGGCCAGGCTTCCGATGGCCGATTCTGTTGTGGGTGTGTTTCGATTCGAAGCCTCATTGGCTTTAGATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTGGGCTTCCCCCTTTTCTCCATTATGCAGATCAAAAGGATCTGGGTCATAAATCCCCGTATCGAGGTCGGTACGGCCTAATGGCTAATAGGATGTCTTATAGTGATGCATATTGTCATGATATATTAGCAACATTCAACGTTGAGAGACCCGTTTCTTTGCTGAGAGACAATGTCGAGCAGCTCCAAACCGACATTTTTGAAGAGTTCCCTATACCGTCTATCAAAGTGGATGTACTATATCTAGATTCGTTATCTGGATCAAACTGTACGAAAGTTGTGTTCAGCCTCGATTCAGATACGGATGATTCAGAAATCTCGCAGACGTATCTAAGTTTAATCAGGTCGACGTTTGCAAGTCTAGTAACGAATCAGTCGTTCCTCCATGTTACCAAATCCATGTTCGGGGAGGCCTTTTCGTTTGAAGTACTGAAATTCCCGGGAGGAATAACGATAATCCCGCCACAGAGTGCATTTCTTTTGCAGAAAGTGCAAATTCTTTTCAACTTTACATTGAACTTCTCTGTTCATCAGATTCAAGTTCACTTCGGTGAACTGACCAGTCAACTGGAGGCGGGATTACGACTAGCTCCGTATGAGATCTTATATATTAAACTATGGAATGCGGAAGGTTCGACCATGACTGCCCCTACGATTGTCCAGTCGTCTGTTCTTCTGGAAGTCGGAAATACTCCATCGATGCGACGACTGAAGCAGCTAGCTCAAACAATATCGGGTTCTAATTCTAGTAACCTCGGCCTGAATAATACAGAGTTCGGAAAAGTTAAGCAAGTTCGCCTTTCCTCGATTCTTAAACACTCCCTCAATGGCAGTGACGGGAACAGCCCTGTAAGGTCACCTTCTCCTGCTCCGGCTCCGGCTCCTACACCCCAGCCCCATAACTACCATCATCCCCCGACTCGCCACCATCACCACCATCACACCCCTCTTACACCTGCAATTTCACCTGCCCCTACAACCGAGAAAGGCGCACCGAAATACGGTTCCCCTGCCCCTGAAAGAACAGCAGCATCACCTAAGAGAAGTTCCGAGGCAGAGCCGCCCGGTTGTCAATATAGATACAAGAGGAAGTCCAGTAGAAAAGAAGGAAAGCAATCTCCTGTTCATTCTGCTCCATCACCATCACCAAAACATCGAGTCGTCTCTCCAGCTCCAGCATTAGCTCCATTACCAAACGTCGTTTACACTCACGTTCAACCACCGTCAAAAAGCAACTCCAACCACCACGAAACATCGACGACGAATCCATCATTTGCACCATCGCCATCCCCATCTGGTGCAGATCGTCATCGAACGATCACGCAATGGGGATTCACACTGTTTCTGATTCTCGCACACCATATGTAG 1539 47.5 MGKNDGEQPPQSAVGSRPSGQASDGRFCCGCVSIRSLIGFRCIFILLLSVALFVSAVFGLPPFLHYADQKDLGHKSPYRGRYGLMANRMSYSDAYCHDILATFNVERPVSLLRDNVEQLQTDIFEEFPIPSIKVDVLYLDSLSGSNCTKVVFSLDSDTDDSEISQTYLSLIRSTFASLVTNQSFLHVTKSMFGEAFSFEVLKFPGGITIIPPQSAFLLQKVQILFNFTLNFSVHQIQVHFGELTSQLEAGLRLAPYEILYIKLWNAEGSTMTAPTIVQSSVLLEVGNTPSMRRLKQLAQTISGSNSSNLGLNNTEFGKVKQVRLSSILKHSLNGSDGNSPVRSPSPAPAPAPTPQPHNYHHPPTRHHHHHHTPLTPAISPAPTTEKGAPKYGSPAPERTAASPKRSSEAEPPGCQYRYKRKSSRKEGKQSPVHSAPSPSPKHRVVSPAPALAPLPNVVYTHVQPPSKSNSNHHETSTTNPSFAPSPSPSGADRHRTITQWGFTLFLILAHHM 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6722216 6726766 + Cp4.1LG10g10720.1 Cpe10g01098 476635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01098 512 MobiDBLite consensus disorder prediction 1 24 - -
Cpe10g01098 512 MobiDBLite consensus disorder prediction 343 359 - -
Cpe10g01098 512 PANTHER F20B24.21 1 509 - -
Cpe10g01098 512 MobiDBLite consensus disorder prediction 461 494 - -
Cpe10g01098 512 MobiDBLite consensus disorder prediction 330 447 - -
Cpe10g01098 512 MobiDBLite consensus disorder prediction 460 494 - -
Cpe10g01098 512 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 509 - -
Cpe10g01098 512 MobiDBLite consensus disorder prediction 414 428 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00446 Cpe10g01098 CCT
Cpe10g01098 Cpe19g00242 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01098 Cpe-Chr10:6722216 Cpe14g00309 Cpe-Chr14:1819251 4.02E-49 dispersed
Cpe03g00446 Cpe-Chr3:2524679 Cpe10g01098 Cpe-Chr10:6722216 2.45E-126 transposed
Cpe10g01098 Cpe-Chr10:6722216 Cpe19g00242 Cpe-Chr19:1985781 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01098 - - bhj:120073837 724.546