Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01101 ATGGAAGGAAAGGGAAGTGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTCCAATTTGGCTATGCTGGGATGAACATCATCACTAAAGTAGCTCTCAACCGCGGTATGAGCCATTACGTTCTCGTCACCTATCGCCAGGCCTTTGCCACGATCGTGCTCGCTCCGTTTGCCTTCTTCTTCGAAAGGAAAGTAAGACCCAAGATTAGTTTCCGTCTGTTCGTGCAAATTTTCCTTCTGGGTTTGTTAGGACCCGTGATTGATCAAAACTTTTATTATGCTGGGTTGAAGCTCACTTCTCCTACCTTTTCATGTGCCATGAGCAATATGCTTCCGGCAATGACATTCATCTTGGCTCTTCTTTGCAGTTGTAAAATTTGGAGTGATATTTTACAGGCAATAACATTGAAGAATTACACAGCCCATCTGTCTCTTACAACCCTTGTGTGCTTCTTGGGGACATTGCAATCCATGGCTGTCACCTTTGTAATGGAAAACAAAGCTTCTGTTTGGAGCGTTGGATGGGACATGAATCTTCTTGCTGCTGTTTATGCCGGAATAGTTTCATCAAGCATAGCTTACTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTGTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCTATAATGGCCACTTTCATGCTCGCCGACAACATTTACCTCGGACGTGTTGTTGGAGGTGTTGTAATGGTGGTGGGGCTGTACTTAGTGCTATGGGGAAAATACAGAGATTACAAAGAAAATGAAGGAATGAAAGAAGAGGCCGCCATTGTTGAACCAGTGAAGCTTGAGAAAAAGAAGAGGAAATTGGCAACAGTAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACGACATCAACATCATTAAACGACATCGAAATGCAAAGGAACGACACGACATCAAATGTCGACAATAATAATGTTACAAAATTGCCATGTCCTCCACCACCACCCATTATTGTCGTATAG 1032 42.83 MEGKGSGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATIVLAPFAFFFERKVRPKISFRLFVQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCSCKIWSDILQAITLKNYTAHLSLTTLVCFLGTLQSMAVTFVMENKASVWSVGWDMNLLAAVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMATFMLADNIYLGRVVGGVVMVVGLYLVLWGKYRDYKENEGMKEEAAIVEPVKLEKKKRKLATVVEEEEEEEEEEETTSTSLNDIEMQRNDTTSNVDNNNVTKLPCPPPPPIIVV 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7109565 7113006 + Cp4.1LG10g10640.1 Cpe10g01101 476638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01101 343 MobiDBLite consensus disorder prediction 294 308 - -
Cpe10g01101 343 PANTHER WAT1-RELATED PROTEIN 11 129 - -
Cpe10g01101 343 MobiDBLite consensus disorder prediction 309 330 - -
Cpe10g01101 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 181 261 - -
Cpe10g01101 343 Coils Coil 282 306 - -
Cpe10g01101 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 127 - -
Cpe10g01101 343 PANTHER WAT1-RELATED PROTEIN 11 129 IPR030184 GO:0016021|GO:0022857
Cpe10g01101 343 PANTHER WAT1-RELATED PROTEIN 136 294 IPR030184 GO:0016021|GO:0022857
Cpe10g01101 343 MobiDBLite consensus disorder prediction 290 343 - -
Cpe10g01101 343 Pfam EamA-like transporter family 18 127 IPR000620 GO:0016020|GO:0016021
Cpe10g01101 343 Pfam EamA-like transporter family 140 257 IPR000620 GO:0016020|GO:0016021
Cpe10g01101 343 PANTHER WAT1-RELATED PROTEIN 136 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01186 Cpe-Chr1:7055958 Cpe10g01101 Cpe-Chr10:7109565 4.53E-95 dispersed
Cpe10g01101 Cpe-Chr10:7109565 Cpe06g00635 Cpe-Chr6:3930842 7.27E-82 dispersed
Cpe10g01101 Cpe-Chr10:7109565 Cpe03g00412 Cpe-Chr3:2306202 1.33E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01101 - - cpep:111803342 561.222