Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01133 ATGTCGATTGCGTATGACGATATTATAGAAGCAACAGAGGACTTCGATATTAAATATTGCATTGGCACTGGTGGGTATGGAAGTGTTTATAGAGCAAGGCTTCCAAATGGTAAGGTCGTAGCTCTAAAGAAACTTCATACCCGTGAAGCCCAAGAGACAACTCTTTTCAAAAGTTTCCAAAATGAAGTTGATATGCTGAAAGAGATAAGGCACAAGAACATCATTAAACTCCATGGATATTGCCTCCATAAACGTTGCATGTTTCTCGTATATGAATACATGGAGAGGGGAAGCCTATTTTGGGTGTTGAGTAACGACAAAGAAGCAGTGGAATTGGATTGGAAAAAAAGATTGAACGTCATACGAAGAGTTTCACATGCTTTGTCATACATACATCATGATTGGATTACTCCAATCATTCATCGGGACGTTACAACCAGTAATATACTTTTGGACTCAAATTTAGAAGCTTTTTTTATCTGA 483 37.68 MSIAYDDIIEATEDFDIKYCIGTGGYGSVYRARLPNGKVVALKKLHTREAQETTLFKSFQNEVDMLKEIRHKNIIKLHGYCLHKRCMFLVYEYMERGSLFWVLSNDKEAVELDWKKRLNVIRRVSHALSYIHHDWITPIIHRDVTTSNILLDSNLEAFFI 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7981268 7983293 + Cp4.1LG10g12160.1 Cpe10g01133 476670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01133 160 SUPERFAMILY Protein kinase-like (PK-like) 4 157 IPR011009 -
Cpe10g01133 160 Gene3D Transferase(Phosphotransferase) domain 1 94 160 - -
Cpe10g01133 160 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Cpe10g01133 160 ProSiteProfiles Protein kinase domain profile. 15 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01133 160 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 159 - -
Cpe10g01133 160 Pfam Protein kinase domain 19 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01133 160 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Cpe10g01133 160 ProSitePatterns Tyrosine protein kinases specific active-site signature. 139 151 IPR008266 GO:0004672|GO:0006468
Cpe10g01133 160 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 3 159 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01133 Cpe-Chr10:7981268 Cpe13g00992 Cpe-Chr13:8203284 4.32E-36 dispersed
Cpe17g00336 Cpe-Chr17:2367770 Cpe10g01133 Cpe-Chr10:7981268 5.93E-13 dispersed
Cpe10g01133 Cpe-Chr10:7981268 Cpe10g01134 Cpe-Chr10:7999416 1.93E-60 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62684 PF00069 Pkinase 6.50E-29 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01133 - - cpep:111803759 327.405