Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01151 ATGAACGTAAACGCATCAAATTTCGTAAAACACCCACCGGATTACCTGAGAAGAATCGATCAAATAGCAAAAACCGCCGCGAATTCCGGCAACCAGACGGCGACAGCAAACTCCGAGGGTTATTCAAAAACCCACTTCCGGTGCGACAGTTTGGAGGCGCCGGGAATGGTGATTAAGCCGCACACCGGCGGTGATGTGCGGTGGGACGCCATTAATATGGTGTCGAAAGGGGCGGCGTTGAATTTGAGCCATTTTCAGCTGTTGAAGAGGCTTGGTTATGGGGATATTGGGAGTGTTTATTTGGTGGAATTGAGAGGAACTCATACGTTCTTTGCTATGAAAGTGATGGATAAGGTGTCTTTGGCTAGCCGGAATAAGGTGTTGAGGGCTCAAACGGAGAGGGAGATTTTGGGGCTTTTGGATCATCCTTTTTTGCCCACACTTTATTCTTATTTTGAAACTGATAAGTTTTATTGTTTGGTTATGGAGTTTTGTAGCGGTGGGAATCTTCATTCTCTTCGTCAAAAGCAACCTTACAAGTATTTTACTGAAGAAGCTGCCAGGTTCTATGCATCAGAGGTTCTATTAGCATTGGAATACCTTCACATGTTAGGCATAGTCTACAGAGATTTGAAACCCGAAAACCTATTAATCCGAGACGAAGGCCACATCATGCTCTCCGATTTCGACCTCTCCCTCCGCTGCTCCGTCAGCCCGACCCTCGTCAAATCCTCCTCCGTCAACGTCAACGGCAGCTCCAACACCGGCAGCAACGGCAGCAATGGCGGAGGCAGCGGTGGCATTCTCGACGACGAATCCGCTGTCCATGGCTGCATGCAACCTTCCAATTTCCTCCCACGCATTCTCCCTTCCAAGAAGAATCGAAAGTCGAAATCCGACATCGGCCTCTTCGTCGGTGGCTCCCTCCCCGAACTCATGGCCGAACCAACCAACGTTCGGTCCATGTCCTTCGTCGGTACACACGAGTATCTCGCACCGGAGATCATACAAGGGGAAGGTCACGGCAGCGCCGTCGACTGGTGGACCTTTGGGATCTTCCTCTACGAGCTTCTTCATGGGACCACACCCTTCAAAGGGTCTGGAAATAGGGCCACGCTTTTCAACGTGGTGGAGCAGCCGCTTAGGTTCCCGGAGGCGCCGCAGGCCAGCCTAGCCGCTAGGGATCTTATCAGAGGGCTTCTGGTCAAGGAGCCGCAAAAGAGGATCGCTTATAGAAGAGGCGCCACTGAGATCAAGCAGCATCCCTTCTTTGATGGAGTGAATTGGGCGTTGGTGAGAAGCGCAATGCCGCCGCACGTGCCGGAGCCGGTGGATTTCAGCCAGTTTGCCAGAAAGAAGGGCGGCGGAGGAGTGCAGGAAGAGAAGAAGCCGGTGGCTGCTGGGAATTCTTCGCCGTCTACTGGTGGCGATCCCAATTATGTGGATTTTGAGTACTTCTAA 1461 51.75 MNVNASNFVKHPPDYLRRIDQIAKTAANSGNQTATANSEGYSKTHFRCDSLEAPGMVIKPHTGGDVRWDAINMVSKGAALNLSHFQLLKRLGYGDIGSVYLVELRGTHTFFAMKVMDKVSLASRNKVLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPYKYFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLIRDEGHIMLSDFDLSLRCSVSPTLVKSSSVNVNGSSNTGSNGSNGGGSGGILDDESAVHGCMQPSNFLPRILPSKKNRKSKSDIGLFVGGSLPELMAEPTNVRSMSFVGTHEYLAPEIIQGEGHGSAVDWWTFGIFLYELLHGTTPFKGSGNRATLFNVVEQPLRFPEAPQASLAARDLIRGLLVKEPQKRIAYRRGATEIKQHPFFDGVNWALVRSAMPPHVPEPVDFSQFARKKGGGGVQEEKKPVAAGNSSPSTGGDPNYVDFEYF 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8351951 8355132 + Cp4.1LG10g12000.1 Cpe10g01151 476688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01151 486 Gene3D Phosphorylase Kinase; domain 1 83 168 - -
Cpe10g01151 486 Gene3D Transferase(Phosphotransferase) domain 1 319 442 - -
Cpe10g01151 486 MobiDBLite consensus disorder prediction 450 481 - -
Cpe10g01151 486 Gene3D Transferase(Phosphotransferase) domain 1 169 238 - -
Cpe10g01151 486 SUPERFAMILY Protein kinase-like (PK-like) 82 448 IPR011009 -
Cpe10g01151 486 PANTHER FLIPPASE KINASE 1-RELATED 26 486 - -
Cpe10g01151 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Cpe10g01151 486 CDD STKc_phototropin_like 83 445 - -
Cpe10g01151 486 ProSiteProfiles Protein kinase domain profile. 85 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01151 486 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 26 486 - -
Cpe10g01151 486 SMART serkin_6 85 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01151 486 Pfam Protein kinase domain 321 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe10g01151 486 Pfam Protein kinase domain 86 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01151 Cpe-Chr10:8351951 Cpe10g01239 Cpe-Chr10:9546367 0 dispersed
Cpe16g00891 Cpe-Chr16:8376300 Cpe10g01151 Cpe-Chr10:8351951 9.47E-77 dispersed
Cpe10g01151 Cpe-Chr10:8351951 Cpe19g00087 Cpe-Chr19:680519 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62686 PF00069 Pkinase 2.90E-37 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01151 - - cmos:111435499 934.865