Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe10g01182 ATGGAGGTCGATCCAAATTCTGGGAAATCGTTGAAACAGATTGGGGGCGGCCAGGTTTGTCAGATCTGCAGCGATTCCGTCGGCACGACGGCTGACGGTGAGCCGTTTGTTGCGTGTGATGTTTGTGCGTTTCCGGTTTGCCGTCCCTGTTACGAGTACGAGAGGAAAGACGGGAATCAGTCTTGCCCTCAATGCAAGACCAAATACAAGTGGCATAAAGGAAGTCCTCCTGTTCATGGAGAGGCAGTGGAAGATGTTGATGGTAATGGAGCGGAAGGGGCGCAAGAAAGGCATCATAAGAAGCCAGAGCGCACGCTTAGCTGGGATACCAATTATGATAAGGAGGGATCGTTTAATCACATTCCTTTGCTCACCACTGGACGATCTGTTTCTGGAGAACTGTCTGCTGCATCTCCCGAGCGGCTCTCCATGGCATCGCCTGAAAGTGGGAGTCGAGCTAACTATCGAATCATGGATCAATCGAGGGACTCGGGATCGGCTAGGTTTGGCAATGTAGCCTGGAAAGAGAGGATAGATAGTTGGAAGGTGAAGCAGGACAAGAGTGTGCCGCCGATGAGTGTTAGTCATGCTCCTTCTGAAGGGAGGGGTGGTGCTGATTTTGATGCTAGCACTGATGTCATGATCGATGATTCTTTACTGAATGACGAAGCTCGTCAGCCTCTATCGAGGAAGGTTTCTATTCCGTCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGGCTTATTATTCTTTGCATCTTCTTGCACTACCGGATTACAAATCCAGTTCCGAATGCCTTTGCTCTGTGGTTAATATCAGTGATTTGTGAGATATGGTTTGCTGTATCTTGGATTTTGGATCAGTTCCCCAAATGGCTTCCGGTCAACCGGGAGACATATCTTGATAGGCTTGCTCTACGATATGATCGTGAAGGAGAGCCGTCTCAGTTGGCTGCTGTCGACATATTTGTCAGTACTGTCGACCCTCTGAAAGAACCTCCCCTCGTCACAGCCAATACGGTCCTATCGATTCTCTCTGTGGACTATCCAGTTGATAAAGTTTCTTGCTATGTATCAGATGACGGAGCTGCTATGTTAACATTTGAAGCCTTGTCTGAAACATCAGAATTTGCAAGAAAATGGGTTCCTTTCTCCAAGAAATACAGCATTGAGCCACGAGCACCCGAGTGGTATTTTTCTCAGAAGATCGATTACTTAAAGGACAAGGTTCATCCATCATTCGTGAAGGATCGGAGAGCGATGAAGAGAGAATACGAGGAGTTTAAAATCCGTATCAATGGACTCGTTGCTAAGGCACAGAAAGTTCCTGATGAAGGGTGGGTCATGCAAGACGGTACGCCATGGCCGGGAAATAACACTAGAGATCATCCAGGAATGATACAGGTTTTCTTAGGCCACAGTGGAGGACTCGATACTGAGGGTAACGAGCTTCCACGTCTGGTTTACGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAAAAGGCTGGTGCTATGAATGCTCTTGTTCGGGTATCTGCCGTGCTTACCAATGGACCGTTCTTGTTAAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCGTTGCGGGAAGCTATGTGTTTTATGATGGATCCTAACCTTGGAAAATCAGTTTGCTATGTTCAGTTTCCACAGAGGTTCGATGGGATTGATAGAAATGATCGATATGCTAACCGAAACACTGTTTTCTTCGATATCAATCTTCGAGGCTTGGACGGTATTCAAGGTCCCGTTTATGTGGGAACGGGATGTGTTTTCAATCGAACTGCGTTGTATGGCTACGAACCCCCTCTCAAGCCCAAGCATAAAAAACCAGGGCTATTCTCGAGTTGCTTTGGGAAGTCGAAAAAGAAAAGTTCTAAATCAAAAAGAAAAGATTCTGATAAGAAGCAAACGAGTAAAAATGTCGATCCCACCGTGCCAATATTCAACCTCGAGGATATTGAGGAAGGAGTTGAAGGTGCCGGGTTTGATGACGAGAAATCGCTGCTAATGTCGCAAATGAGCCTGGAGAAGAGGTTCGGTCAATCGGCTGTATTTGTTGCTTCCACGCTAATGGAGAACGGTGGCGTGCCACAGTCTGCCACTCCGGAATCGCTCCTTAAAGAAGCAATTCACGTCATCAGTTGTGGATACGAGGATAAAACAGACTGGGGAAGTGAAATCGGATGGATCTACGGTTCGGTCACAGAAGATATTTTGACAGGGTTCAAGATGCACGCCCGTGGTTGGAGATCGATCTATTGCATACCGGACCGTCCTGCATTTAAAGGGTCTGCTCCCATTAATCTTTCTGATCGTCTTAACCAAGTGCTTCGGTGGGCGTTAGGTTCGGTCGAAATTCTTTTCAGTCGGCATTGTCCTATGTGGTACGGTTATGGTGGACGGTTGAAATGGCTCGAGCGATTTGCTTATGTTAACACTACCATTTACCCAATAACATCAATTCCTCTTCTTGCCTATTGTACCTTGCCTGCAATATGTCTGCTCACTGGAAAGTTCATCATTCCTCAGATCAGTAATCTTGCCAGCATTTGGTTCATTTCTCTGTTTCTTTCCATCTTTGCTACTGGTATTCTGGAAATGAGATGGAGCGGTGTCGGGATCGATGAATGGTGGAGAAACGAGCAGTTCTGGGTTATCGGAGGTGTGTCGGCCCATCTGTTTGCCGTGTTCCAAGGTCTTCTTAAAGTTCTTGCTGGAATCGATACCAACTTCACGGTTACTTCAAAAGCATCTGACGAAGATGGAGATTTTGCTGAGCTCTACTTGTTCAAGTGGACAACTCTTCTCATTCCCCCAACTACTCTCCTGATTATCAACATAGTAGGAGTTGTTGCTGGAATTTCTTATGCCATTAACAGTGGCTATCAATCTTGGGGTCCCCTTTTCGGCAAACTGTTCTTCGCGTTCTGGGTGATTATTCATCTCTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAGAACCGAACTCCCACGATCGTGGTTGTCTGGTCCATCCTCCTTGCCTCAATCTTCTCCCTCTTATGGGTTCGGATCGATCCCTTCACAACTCGGGTAACTGGTCCTGACGTCGAACAATGTGGAATCAACTGCTAA 3153 46.59 MEVDPNSGKSLKQIGGGQVCQICSDSVGTTADGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKWHKGSPPVHGEAVEDVDGNGAEGAQERHHKKPERTLSWDTNYDKEGSFNHIPLLTTGRSVSGELSAASPERLSMASPESGSRANYRIMDQSRDSGSARFGNVAWKERIDSWKVKQDKSVPPMSVSHAPSEGRGGADFDASTDVMIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLIILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFSKKYSIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEEFKIRINGLVAKAQKVPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLFSSCFGKSKKKSSKSKRKDSDKKQTSKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYGGRLKWLERFAYVNTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1050
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8775512 8781378 + Cp4.1LG10g11640.1 Cpe10g01182 476719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe10g01182 1050 ProSiteProfiles Zinc finger RING-type profile. 20 66 IPR001841 -
Cpe10g01182 1050 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 440 613 IPR029044 -
Cpe10g01182 1050 Pfam Cellulose synthase 322 1043 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cpe10g01182 1050 SUPERFAMILY RING/U-box 15 84 - -
Cpe10g01182 1050 MobiDBLite consensus disorder prediction 90 110 - -
Cpe10g01182 1050 PANTHER CELLULOSE SYNTHASE 16 1050 - -
Cpe10g01182 1050 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Cpe10g01182 1050 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 93 IPR013083 -
Cpe10g01182 1050 MobiDBLite consensus disorder prediction 623 655 - -
Cpe10g01182 1050 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Cpe10g01182 1050 SUPERFAMILY Nucleotide-diphospho-sugar transferases 336 853 IPR029044 -
Cpe10g01182 1050 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 16 1050 - -
Cpe10g01182 1050 MobiDBLite consensus disorder prediction 73 111 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g01182 Cpe-Chr10:8775512 Cpe17g00688 Cpe-Chr17:5498729 0 dispersed
Cpe18g00576 Cpe-Chr18:6213170 Cpe10g01182 Cpe-Chr10:8775512 0 transposed
Cpe10g01182 Cpe-Chr10:8775512 Cpe19g00060 Cpe-Chr19:447906 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe10g01182 K10999 - csv:101211779 2091.23