Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g01185 | ATGGGAACCCCGGAATTCCCTAATCTCGGGCAGCATTGCAACTTGGAAGATTGTAAGCAGATCGATTTCTTGCCCTTTACTTGCGATTGCTGTCGCCAGGTCTTTTGTTTGGAGCATCGTAGCTACAATAGACATAGTTGTCCGAAAGCAGATAGACGGGATGTCACCGTCGTCATTTGTCCGCTGTGTGCCAAAGGAGTTCGTCTCGTCCCAGATCAAGATCCCAACATTACATGGGAGATACATGTTAACACTGAATGTGACCCTTCAAATTATGAAAAAGTCACAAAGAAGAAAAAATGCCCTGTACCAGGCTGTAGGGAGTCGTTAACGTTTTCAAACACGATCAAGTGCCGGGACTGCTCGGTAGACCATTGTTTGAAACACCGTTTTGGTCTCGATCATAAGTGTCCTGGTCCGAAAAAACCCGAACCAGCAGGCTTTCCTTTTGTTGGTGTTTTAAGTAGAAGTAAACAAGAAGAGAATGGACCTAAGAAAGCATTGCCTAACACAGCTTCCTCTAATTGGACTACAGCCCTCCTTAATGTAGCCTCGTCTTTTAAAGCCTCATGGAAAGCAACAGGCAACAACAGCAATGGAAATGGACATGTTGAGCAATGTCCACAATGTAGTGCTAAGTTTTCGTTGGTTTCGTCTCTAGTCGAGCATGTAAAAAAAGTCCATGAAAGCGGTGTCAATCGACCTGGGGCGAAGAAGGTAGTAATCGATGCTTGTCCAAAGTGTAGCAGAGGGTTCATCGATCCTGTTGCCCTCGTCGAGCATATTGAGAAGGATCATGGTGGCGTCCAAAGTGTAGCAGAGAATTTATCGATCCTATTGCCCTTGTCGAGCATATTGAGAAAGATAGCGGTGGTACTTCAAGAGCTTGAGCATATGTATCAGAAAATCCTATTGCCCTCCTCGAGCATATTGAGAGAGATCATGGTGGTCTTTTGTTTGGAGCATCGTAGCTACAATAGACATAGTTGTCCGAAAGCAGATAGACGGGATGTCACCGTCGTCATTTGTCCGCTGTGTGCCAAAGGAGTTCGTCTCGTCCCAGATCAAGATCCCAACATTACATGGGAGATACATGTTAACACTGAATGTGACCCTTCAAATTATGAAAAAGTCACAAAGAAGAAAAAATGCCCTGTACCAGGCTGTAGGGAGTCGTTAACGTTTTCAAACACGATCAAGTGCCGGGACTGCTCGGTAGACCATTGTTTGAAACACCGTTTTGGTCTCGATCATAAGTGTCCTGGTCCGAAAAAACCCGAACCAGCAGGCTTTCCTTTTGTTGGTGTTTTAAGTAGAAGTAAACAAGAAGAGAATGGACCTAAGAAAGCATTGCCTAACACAGCTTCCTCTAATTGGACTACAGCCCTCCTTAATGTAGCCTCGTCTTTTAAAGCCTCATGGAAAGCAACAGGCAACAACAGCAATGGAAATGGACATGTTGAGCAATGTCCACAATGTAGTGCTAAGTTTTCGTTGGTTTCGTCTCTAGTCGAGCATGTAAAAAAAGTCCATGAAAGCGGTGTCAATCGACCTGGGGCGAAGAAGGTAGTAATCGATGCTTGTCCAAAGTGTAGCAGAGGGTTCATCGATCCTGTTGCCCTCGTCGAGCATATTGAGAAGGATCATGGTGGTACTTCAAAAGCTTGA | 1668 | 44.9 | MGTPEFPNLGQHCNLEDCKQIDFLPFTCDCCRQVFCLEHRSYNRHSCPKADRRDVTVVICPLCAKGVRLVPDQDPNITWEIHVNTECDPSNYEKVTKKKKCPVPGCRESLTFSNTIKCRDCSVDHCLKHRFGLDHKCPGPKKPEPAGFPFVGVLSRSKQEENGPKKALPNTASSNWTTALLNVASSFKASWKATGNNSNGNGHVEQCPQCSAKFSLVSSLVEHVKKVHESGVNRPGAKKVVIDACPKCSRGFIDPVALVEHIEKDHGGVQSVAENLSILLPLSSILRKIAVVLQELEHMYQKILLPSSSILREIMVVFCLEHRSYNRHSCPKADRRDVTVVICPLCAKGVRLVPDQDPNITWEIHVNTECDPSNYEKVTKKKKCPVPGCRESLTFSNTIKCRDCSVDHCLKHRFGLDHKCPGPKKPEPAGFPFVGVLSRSKQEENGPKKALPNTASSNWTTALLNVASSFKASWKATGNNSNGNGHVEQCPQCSAKFSLVSSLVEHVKKVHESGVNRPGAKKVVIDACPKCSRGFIDPVALVEHIEKDHGGTSKA | 555 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8789436 | 8794770 | + | Cp4.1LG10g11650.1 | Cpe10g01185 | 476722 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g01185 | 555 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 243 | 271 | IPR013087 | - | |
Cpe10g01185 | 555 | PANTHER | ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 | 316 | 477 | - | - | |
Cpe10g01185 | 555 | SMART | c2h2final6 | 243 | 266 | IPR013087 | - | |
Cpe10g01185 | 555 | SMART | c2h2final6 | 526 | 549 | IPR013087 | - | |
Cpe10g01185 | 555 | SMART | c2h2final6 | 488 | 511 | IPR013087 | - | |
Cpe10g01185 | 555 | SMART | c2h2final6 | 205 | 228 | IPR013087 | - | |
Cpe10g01185 | 555 | SMART | AN1_Zf_4 | 384 | 425 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | SMART | AN1_Zf_4 | 101 | 142 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | SMART | AN1_Zf_4 | 13 | 52 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 207 | 228 | IPR013087 | - | |
Cpe10g01185 | 555 | SUPERFAMILY | AN1-like Zinc finger | 376 | 427 | IPR035896 | - | |
Cpe10g01185 | 555 | PANTHER | ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 | 1 | 194 | - | - | |
Cpe10g01185 | 555 | Gene3D | - | 81 | 147 | IPR035896 | - | |
Cpe10g01185 | 555 | Gene3D | - | 364 | 430 | IPR035896 | - | |
Cpe10g01185 | 555 | Pfam | AN1-like Zinc finger | 101 | 141 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | Pfam | AN1-like Zinc finger | 13 | 51 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | Pfam | AN1-like Zinc finger | 384 | 424 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | PANTHER | ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 | 479 | 555 | - | - | |
Cpe10g01185 | 555 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 205 | 228 | IPR013087 | - | |
Cpe10g01185 | 555 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 196 | 270 | - | - | |
Cpe10g01185 | 555 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 490 | 511 | IPR013087 | - | |
Cpe10g01185 | 555 | ProSiteProfiles | Zinc finger AN1-type profile. | 7 | 55 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 526 | 554 | IPR013087 | - | |
Cpe10g01185 | 555 | ProSiteProfiles | Zinc finger AN1-type profile. | 378 | 428 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | PANTHER | ZINC FINGER AN1 AND C2H2 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 13 | 196 | 270 | - | - | |
Cpe10g01185 | 555 | Gene3D | Classic Zinc Finger | 181 | 272 | - | - | |
Cpe10g01185 | 555 | Gene3D | Classic Zinc Finger | 464 | 554 | - | - | |
Cpe10g01185 | 555 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 488 | 511 | IPR013087 | - | |
Cpe10g01185 | 555 | ProSiteProfiles | Zinc finger AN1-type profile. | 95 | 145 | IPR000058 | GO:0008270 | |
Cpe10g01185 | 555 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 528 | 549 | IPR013087 | - | |
Cpe10g01185 | 555 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 1 | 194 | - | - | |
Cpe10g01185 | 555 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 479 | 555 | - | - | |
Cpe10g01185 | 555 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 245 | 266 | IPR013087 | - | |
Cpe10g01185 | 555 | SUPERFAMILY | AN1-like Zinc finger | 93 | 144 | IPR035896 | - | |
Cpe10g01185 | 555 | Gene3D | - | 2 | 59 | IPR035896 | - | |
Cpe10g01185 | 555 | SUPERFAMILY | AN1-like Zinc finger | 6 | 50 | IPR035896 | - | |
Cpe10g01185 | 555 | PANTHER | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED | 316 | 477 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00546 | Cpe-Chr3:3199642 | Cpe10g01185 | Cpe-Chr10:8789436 | 3.63E-15 | dispersed | |
Cpe10g01185 | Cpe-Chr10:8789436 | Cpe19g00058 | Cpe-Chr19:441424 | 1.28E-132 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50174 | PF01428 | zf-AN1 | 1.60E-07 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g01185 | - | - | cpep:111803780 | 512.686 |