Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g01213 | ATGGCGGATTACGATCTAACTCCACGAATTGCGCCGAATCTGGACCGCCATCTTGTTTTCCCTCTCCTTGAGTTTCTTCAAGAGAGGCAGCTTTACCCCGACGAGCAGATCCTCAAGGCCAAGATCGAACTTCTCAACAAAACCAACATGGTTGATTACGCCATGGACATCCATAAGTCGCTGAGGGCGGAAGTCGTGGGGAGGCTTAAAGCTTTGGAGGAGTCTGCTGCGCCGCTTGTTACTTTTCTGCAGAATCCTGCTGCTGTTCAGGAATTGAGGGCTGATAAGCAGTACAATCTTCAAATGCTTAATGATCGTTATCAGAATTTCTCGTCGCATATGAATCAAGTGCAAAGCAGAATATGGTTGATGCATTGGAGCCTCTTCATTTTTTTCAATCATGACAATGGAAGAACACAGATAATTGACCTTTTTAATCAAGATAAGTATTTAAGTGCCATTCAAACCAATGCTCCCCATCTATTACGCTATTTGGCCACTGCATTCATCGTTAACAAAAGGCGGAGGCCACAGTTCAAAGATTTTATCAAGGTTATTCAGCAAGAACAGAATTCCTATAAGGATCCCATCACAGAGTTTTTGACTTGTGTCTATGTCAATTATGATTTTGATGGGGCACAAAAAAAGATGAGAGATGTCCTTGCCGAGAAGTTGAACTTAAATTACGAGGAAGCGGAGCAGTGGATTGTTAATCTTGTTCGGACCTCAAAGCTTGATGCCAAGATTGATTCCAAGACGGGAACGGTTATAATGGAACCAAACCAGCCCAACGTATATGAAGAACTGATAGATCACACCAAATCATTATCTGGGCGTACCTACAAGTTAGTCACTCAACTTCTAGAGCATGCACAGGCTCAAGCAACCAGATAA | 894 | 42.95 | MADYDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKSLRAEVVGRLKALEESAAPLVTFLQNPAAVQELRADKQYNLQMLNDRYQNFSSHMNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYLSAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLTCVYVNYDFDGAQKKMRDVLAEKLNLNYEEAEQWIVNLVRTSKLDAKIDSKTGTVIMEPNQPNVYEELIDHTKSLSGRTYKLVTQLLEHAQAQATR | 297 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9073351 | 9076651 | + | Cp4.1LG10g11360.1 | Cpe10g01213 | 476750 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g01213 | 297 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 108 | 219 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cpe10g01213 | 297 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 220 | 295 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cpe10g01213 | 297 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E | 1 | 108 | IPR016650 | GO:0003743|GO:0005737|GO:0005852 | |
Cpe10g01213 | 297 | SUPERFAMILY | Winged helix DNA-binding domain | 219 | 264 | IPR036390 | - | |
Cpe10g01213 | 297 | SMART | eIF3_N_2 | 5 | 111 | IPR019010 | - | |
Cpe10g01213 | 297 | Pfam | eIF3 subunit 6 N terminal domain | 5 | 114 | IPR019010 | - | |
Cpe10g01213 | 297 | ProSiteProfiles | PCI domain profile. | 95 | 263 | IPR000717 | - | |
Cpe10g01213 | 297 | Pfam | PCI domain | 220 | 259 | IPR000717 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g01213 | Cpe-Chr10:9073351 | Cpe19g00038 | Cpe-Chr19:276521 | 0 | dispersed | |
Cpe10g01213 | Cpe-Chr10:9073351 | Cpe19g00037 | Cpe-Chr19:275180 | 5.80E-22 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g01213 | K03250 | - | csv:101205199 | 355.14 |