Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe10g01239 | ATGGCCTCAAAGACGAGTTTGAAACCTTCTGCAAAGCAAACTAAGGGGATAAGCACTGTTAAATCGACTGATGCTAGTGATCTTAAATCCTTACCTTCAGTTGTTTCTGGAGGAGATGTATCAAACTCCACACACAGATTCTTGAATCATTCTGCTTTGATTGATTCGTCGAAAACCAAATCCTCGACTTTGAATCCTAAAGAATCTACTGAGTCTTGTAATCAGGAAGTCAATGAAAATTCCTTGAACTCTATAGATCTTGAGAAGAAAACATCTGAATGTGGGAGTGGGAAGGATAGTTCTGCTTCTGCCAAAGTCAATGATGGAACAAACAGTCTTGCCAAGACTAGTGGGAGCGCGAAAGTTAGTGACCGTGTTGAGATGGTCGAAAGTGGCAAGAGTAGTATATGTCGAGGAAGTACGAGTAGCGATATCAGTGATGAAAGCACCTGTAGCAGCTTTAGTAGTAGTATCAGCAAGCCTCACAAATCAAATGACTTGAGATGGGAGGCTATCCAAGCTGTACGTGCAAGGGATGGGATGTTGGGATTAGGCCATTTTAGACTATTGAAGAGACTAGGTTGTGGCGATATCGGAAGTGTCTACCTGTCGGAATTGAGTGGCACTAAGTGTTATTTTGCAATGAAGGTTATGGATAAAGGGTCTCTCGCTAGTCGAAAAAAGTTGCTTCGTGCTCAGACCGAAAGAGAAATATTGCAGTCTCTTGATCATCCATTCCTTCCTACATTGTATACACATTTTGAGACTGACAAGTTCTCATGCTTGGTGATGGAGTTCTGCCCTGGGGGAGACTTACACACTCTAAGGCAGAGACAGCCGGGGAAGTATTTTCCCGAACAAGCGGTGAAATTTTACGTAGCGGAGGTCCTCCTAGCACTCGAGTATCTTCACATGCTTGGGATTGTATATCGGGACCTTAAGCCCGAGAATGTTCTCGTGAGGGAAGATGGACACATTATGCTTTCAGACTTCGATCTTTCCCTAAGATGTGCTGTTAGTCCAACATTAGTGAAGGGCTCATGTTCTGAGTCCGAACCCTTACGAAAGAATTCAGCTTACTGTGCCCAGCCAGCTTGTATCGAGCCTTCCTGCATCCAGCCATCCTGTGTAGTTCCCACGTCGTGTTTTACTCCCCGACTTTTCTCTAGCAAGTCAAAGAAGGATAGAAAACCCAAGACTGAAATAGGAAACCAGGTAACACCATTGCCAGAGCTGATTGCAGAGCCGACGGAGGCGAGGTCAATGTCATTTGTTGGTACACATGAGTACTTGGCACCCGAGATCATTAAAGGCGAAGGTCACGGAAGTGCTGTTGACTGGTGGACTTTTGGAATCTTCCTATACGAACTGTTGTTTGGTAAAACTCCTTTTAAAGGATCTGGGAATCGGGCGACGTTGTTCAACGTCGTTGGTCAGCCATTGCGGTTTCCAGAATCCCCAGTTGTCAGTTTTGCTGCAAGGGATCTCATCAGGGGATTGCTCGTCAAGGAACCACAGCATAGGTTAGCTTACAAAAGAGGGGCAACTGAGATCAAGCAACACCCGTTCTTTGAAGGTGTTAACTGGGCGTTGATACGATGTGCTTCGCCACCAGACGTACCGAAGCCTGTTGAGATCGAGAGGATACCATCACCAGCACCTCCAGTCAGTGGAAAAGCAGTGATGGCTACTAGACCTGCTCCTGATTCCAAATTATCTGATAATTATCTCGAGTTTGATTTCTTTTAG | 1749 | 45.23 | MASKTSLKPSAKQTKGISTVKSTDASDLKSLPSVVSGGDVSNSTHRFLNHSALIDSSKTKSSTLNPKESTESCNQEVNENSLNSIDLEKKTSECGSGKDSSASAKVNDGTNSLAKTSGSAKVSDRVEMVESGKSSICRGSTSSDISDESTCSSFSSSISKPHKSNDLRWEAIQAVRARDGMLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKYFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKGSCSESEPLRKNSAYCAQPACIEPSCIQPSCVVPTSCFTPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPDVPKPVEIERIPSPAPPVSGKAVMATRPAPDSKLSDNYLEFDFF | 582 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9546367 | 9550444 | + | Cp4.1LG10g12480.1 | Cpe10g01239 | 476776 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe10g01239 | 582 | Gene3D | Transferase(Phosphotransferase) domain 1 | 271 | 339 | - | - | |
Cpe10g01239 | 582 | MobiDBLite | consensus disorder prediction | 1 | 125 | - | - | |
Cpe10g01239 | 582 | ProSiteProfiles | Protein kinase domain profile. | 187 | 524 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g01239 | 582 | Gene3D | Phosphorylase Kinase; domain 1 | 185 | 270 | - | - | |
Cpe10g01239 | 582 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 308 | 320 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe10g01239 | 582 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 24 | 582 | - | - | |
Cpe10g01239 | 582 | Pfam | Protein kinase domain | 421 | 524 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g01239 | 582 | Pfam | Protein kinase domain | 188 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g01239 | 582 | CDD | STKc_phototropin_like | 186 | 547 | - | - | |
Cpe10g01239 | 582 | Gene3D | Transferase(Phosphotransferase) domain 1 | 418 | 541 | - | - | |
Cpe10g01239 | 582 | MobiDBLite | consensus disorder prediction | 1 | 119 | - | - | |
Cpe10g01239 | 582 | SMART | serkin_6 | 187 | 524 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe10g01239 | 582 | SUPERFAMILY | Protein kinase-like (PK-like) | 159 | 551 | IPR011009 | - | |
Cpe10g01239 | 582 | PANTHER | FLIPPASE KINASE 1-RELATED | 24 | 582 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00586 | Cpe-Chr3:3529869 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe03g01844 | Cpe-Chr3:13755082 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe04g00529 | Cpe-Chr4:5753669 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe07g01089 | Cpe-Chr7:9630990 | Cpe10g01239 | Cpe-Chr10:9546367 | 3.40E-44 | dispersed | |
Cpe09g00738 | Cpe-Chr9:6818279 | Cpe10g01239 | Cpe-Chr10:9546367 | 1.17E-136 | dispersed | |
Cpe10g00271 | Cpe-Chr10:1615268 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe10g00735 | Cpe-Chr10:4209095 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe10g01151 | Cpe-Chr10:8351951 | Cpe10g01239 | Cpe-Chr10:9546367 | 0 | dispersed | |
Cpe10g01239 | Cpe-Chr10:9546367 | Cpe19g00458 | Cpe-Chr19:4046135 | 0 | dispersed | |
Cpe16g00797 | Cpe-Chr16:7793278 | Cpe10g01239 | Cpe-Chr10:9546367 | 5.22E-147 | dispersed | |
Cpe19g00918 | Cpe-Chr19:6637719 | Cpe10g01239 | Cpe-Chr10:9546367 | 2.37E-14 | dispersed | |
Cpe10g01239 | Cpe-Chr10:9546367 | Cpe20g00678 | Cpe-Chr20:4641885 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62692 | PF00069 | Pkinase | 1.00E-36 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe10g01239 | K08286 | - | csv:101213662 | 1018.84 |