Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00002 ATGGATCTGGAAACTGGGGTTTATCCCAAGTATGCTAAGAAGGATTCATGGAAGACAGTTCTGACTCTAGCTTTTCAGAGTCTTGGGGTCGTCTATGGTGATTTAAGCACCTCACCTCTATACGTGTATAGGAACACTTTTGCTGAAGAAGACATTGAACACTCGAAGACCAACGAAGAGATTTACGGCGTTTTGTCGTTCATTTTCTGGACCCTAACCATTGTCCCTTTGCTCAAATATGTATTTATTGTGCTCAAAGCAGACGATAATGGCGAGGGAGGGACTTTTGCTCTCTACTCATTGTTGTGTCGACACGCCCGAGTCGGCTGGTTGCCCAATGTTCAAGCGGCAGACGAGGAGCTGGCTGAGTACAAGAAAGAAACCATAATTTTGCCACCCAAAAAAAGCTTTGCATCTAAGCTGAAATCCACGTTAGAATCGCATAAGGTATTGCAGACACTTTTGCTCATTCTGGCTTTGATCGGGACGTGTATGGTAATTGGCGACGGCATCTTAACGCCTGCTATTTCTGGTATTTATGGCATTCCCTTTCTTGGTTTTTTTTCTGCTGTCTCTGGACTGGAGTTCACGATGTCAAAACAGCATCATAAATATGTGGAAGTTCCAGCTGCGTGCATCATACTCATAGGCTTGTTCGCCCTTCAACATTATGGAACGCACAGGGTTGGGTTCTTGTTTGCTCCTATAGTTACAACATGGCTTCTGTGCATTAGTGCAATTGGTTTATACAACATCATTCACTGGAATCCTCATGTTTATCAAGCACTTTCTCCTTATCATATGTTCCTATTCTTGAAGAAAACAAGGAGAGGAGGTTGGATGTCACTAGGAGGGATTCTACTTTGTATAACTGGTTCAGAAGCCATGTTTGCTGATCTTGGACACTTTTCACAATCATCCATCCAGATTGCATTTAGCTTTATGGTGTATCCATCTTTGGTTTTAGCTTATATGGGGCAGGCTGCGTATCTATCTCAACATCATTCGATACCAAATGATTATCGAATTGGATTCTATATATCTGTTCCAGAGAAGTTACGTTGGCCTGTTCTAGTAATTGCCATCCTTGCTGCTGTAGTAGGAAGCCAGGCCATCATCACTGGAACTTTCTCGATTATTAAGCAATGCTCTGCTTTGAATTGCTTCCCCAGAGTCAAAATAGTTCATACATCATCTAAAATTCATGGTCAAATTTATATCCCTGAGATTAATTGGATCCTGATGCTTTTATGCTTAGCCGTTACAATTGGTTTCAGAGATACAAAACGTTTGGGTAATGCATCAGGCTTGGCAGTAATCACGGTGATGTTGGTGACGACCTGTTTAATGTCGTTGGTCATTGTGATTTGCTGGCACCAGAGTGTTGTCCTAGCAATTTGCTTTGTGGTCTTCTTTGGGTCAATTGAAGCCATGTATTTTTCAGCTTCTCTCATTAAGTTTCTAGAAGGAGCATGGGTTCCCATTGTGCTTGCCGTGGTCTTCATGGTTATTATGTATGTGTGGCACTATGGAACGCTGAAGAAGTATGAATTTGATTTTCAAAATAAGGTCTCAATGAATTGGTTGCTTAGTGTGGGATCCAGTCTAGGTATTGTCCGAGTCCGCGGGATTGGCATTGTGCACACTGAACTTGTCTCAGGGCTTCCAGCAATGTTTTCACACTTCGTGACCAACCTTCCTGCGTTCCACCAGGTGGTGGTTTTTCTTTGCATCAAGTCTGTTCCAGTCCCACATGTTAAACCTGAAGAGCGGTTCCTAGTTGGTCGAATTGGAGCCCGTGAGTACAGGTTGTACAGGTGCGTTGTGCGATATGGATACAGAGATGTGCACAAGGATGACACCGAGTTTGAAAAAGATCTTGTATGTAGTATAGCTGAGTTTATAAGATCACAGAAGGTGGAATCCAGTGGTTGCAATGCTAATGCAGAGGATGATATTTGGAAGGAAAATGAGAGAATGACAGTAGTTGGAATGTGCTGTACGCATAGAGACGGAATTCAAATGCAAGAGGATGATGATGAAGAGTTGGGGGAGACGTCTGAGCATAGGGAAATAATGTCACCACGACGTCGGAATCGTATCGTCCGGGCACCCAGGAAAAGGGTGAGGTTTATTGTGCCGGAGAGTCCAAAAGTTGAGGCAACAGCAATGGAGGAACTGCAGGAGTTGATGGAAGCAAGGGAAGCAGGAGTTGCTTACATATTGGGTCAGGCGCATACTAAAGCAAAGCAGGGATCCAGCATGCTACGAAAGCTTATAATTAATTATGGGTATGAATTGTTAAGGAGGAATAGCAGGGGACCCAGTTACCCCCTCAATTTACCTCATGCGTCTACTCTTGAGGTAGGAATGTTGTACCATCTCTGA 2388 43.43 MDLETGVYPKYAKKDSWKTVLTLAFQSLGVVYGDLSTSPLYVYRNTFAEEDIEHSKTNEEIYGVLSFIFWTLTIVPLLKYVFIVLKADDNGEGGTFALYSLLCRHARVGWLPNVQAADEELAEYKKETIILPPKKSFASKLKSTLESHKVLQTLLLILALIGTCMVIGDGILTPAISGIYGIPFLGFFSAVSGLEFTMSKQHHKYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVTTWLLCISAIGLYNIIHWNPHVYQALSPYHMFLFLKKTRRGGWMSLGGILLCITGSEAMFADLGHFSQSSIQIAFSFMVYPSLVLAYMGQAAYLSQHHSIPNDYRIGFYISVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALNCFPRVKIVHTSSKIHGQIYIPEINWILMLLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVICWHQSVVLAICFVVFFGSIEAMYFSASLIKFLEGAWVPIVLAVVFMVIMYVWHYGTLKKYEFDFQNKVSMNWLLSVGSSLGIVRVRGIGIVHTELVSGLPAMFSHFVTNLPAFHQVVVFLCIKSVPVPHVKPEERFLVGRIGAREYRLYRCVVRYGYRDVHKDDTEFEKDLVCSIAEFIRSQKVESSGCNANAEDDIWKENERMTVVGMCCTHRDGIQMQEDDDEELGETSEHREIMSPRRRNRIVRAPRKRVRFIVPESPKVEATAMEELQELMEAREAGVAYILGQAHTKAKQGSSMLRKLIINYGYELLRRNSRGPSYPLNLPHASTLEVGMLYHL 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3133 7831 - Cp4.1LG11g00560.1 Cpe11g00002 476796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00002 795 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 794 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe11g00002 795 MobiDBLite consensus disorder prediction 677 697 - -
Cpe11g00002 795 TIGRFAM kup: potassium uptake protein 23 794 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe11g00002 795 Pfam K+ potassium transporter 24 615 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe11g00002 795 PANTHER POTASSIUM TRANSPORTER 6 1 794 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00248 Cpe-Chr1:1418385 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe01g02356 Cpe-Chr1:19727385 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe03g00553 Cpe-Chr3:3247870 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe03g00669 Cpe-Chr3:4007424 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe04g00441 Cpe-Chr4:5169435 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe04g00561 Cpe-Chr4:6045306 Cpe11g00002 Cpe-Chr11:3133 2.07E-85 dispersed
Cpe11g00002 Cpe-Chr11:3133 Cpe13g00909 Cpe-Chr13:7755145 0 dispersed
Cpe01g01519 Cpe-Chr1:9094534 Cpe11g00002 Cpe-Chr11:3133 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00002 K03549 - tcc:18609411 1240.71