Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00025 ATGAAGACTGGATCGCCACTTGTTCCCGGATGTGGGTTGTTGATTATCATCAGCGCTCTTCTGTTACTTGAAACATCGACAGTGGCAGACCCCAGATCCCAAACCGCGAAGATACTTTGTTCAACTGTGTTAGAGCATAATACAACGGCTTTTGTGCCCAATTTCGTGGGCACAATGCAAGCAATCAGTGACCAAATGCGAACTGGTGGTTTTGGAGTGGCACGTGTGGGTAAAGGGCCGGACGCCAACTACGGACTCGCTCAATGTTACGGAGATTTGTCGCTGATGGATTGTGTGTTGTGTTACGCGGAAGCCCGTACTGTCCTTCCTCAATGCTTCCCTTTCAACGGCGGCCGGATTTTCCTGGACGGCTGCTTCATGAGGGCTGAGAATTACAGCTTTTATGAGGAATTTTCAGGGCCTCTTGACAGGGCTGTGTGCGGTAACAATTCCATCACCAACTCCGTTTATGGACAGTCGACCAGGCAGGCTGTGGCCCGTGCAGTCGAAACTGCACCCAACAATGGAGGGTATGCGAGAATTCAAGTGGCTCTCCCTGGAACCCCCAATGCCTCGGTTTACTTGTTGGCTCAGTGCTGGAGGAATCTGAATCGCAGCTCCTGCACTTCCTGTTTGCAAAACGCCTCTGCTTCTATCTTGAAGTGCTTGCCTCGATCTGAAGCAAGAGCCCTCAACACAGGTTGTTTCATGAGATACTCTAATGTTGACTTCTTAAATGCAGAAGCTCAAGCAACAAGGTCAAGAGGCACCATTGTAGCAATTGTAGTCTCGCTGGTGAGCTCTGTTGCTGTTTTAGTCGTTGGAGTGTTGATTGGCATCTACATCTGGAATAACAGATATGTAAACAACAAACGAAGAGTTCTGTCGGATGGAAGAGAGATAGCTGTGAAGAGGCTGTTCTTCAATAACAAACATAGAGCAGCAGATTTTTACAATGAAGTCAACATAATTAGCAGTGTGGAGCACAAAAATTTAGTGAGGTTGCTTGGGTGTAGTTGCTCTGGACCTGAAAGCCTGTTGGTGTATGAATTCCTTGCCAACAGGAGTCTGGACCGCTTCATTTTTGATGGAGAAAGAGGTAAATCGCTGAATTGGGAGAAGAGGTTTGAGATTATTGTGGGAACGGTTGAAGGGTTGGCTTACCTGCATGAGAACTCAAAAAACAAGATCATTCACAGAGACATCAAGGCCAGTAACATACTGCTGGACTCAAGGCTTCGAGCTAAAATTGCTGATTTTGGATTAGCTAGATCCTTTGAAGAAGATGCATGGAAGCACTTTCAAGCGGGAACAATGGAAAGGATATACGACCCAAACCTTATGGTTGAAGGAGATGGAAGCATGAAAGAGGAGATATTGAGAGTGGTGCAGATCGGGCTTCTTTGCACACAGGAGAGCGCATCTCTGCGACCCACAATGTCGAAGGTACTGCAGATGCTGATGAAGAAGGAAGAGAAGCTTCCGGCGCCGACCAACCCACCCTTCATGGACGAGAGGACGATGGAGCTGAACGATACCAGTGAGGACCCATCCTACTTCAACATGACGGAAGCTTCTTCCTCAGCGGCCACCGTGACCCACAGTTCATTTCATCCCAGAAAAGAAAGAGAGAGGAAAGCCGCCATTGTTGAATCTTTTGACTGGAGATGGTGTCGTGAGGTCTCCTTTCTTACGCTCAGGGACTGCGTTTCTTCAGGATGTTTTCTCCAGCTCCTCCTCCTCCTCCTTCCTCTCCTTTCTATTCTTCTGCTGCTCCCAACTTCAACCATGGGGAAGCCAAGAGATCAAACTGTGAAAGTGATGTGCGGGAAAGAACTCGAGCACAACACCACGGCCTACGTCCCTAACTTTTTTGGTTCCATGGAAAAAGTTAGACAACAGATCCGAACTTCAGGATTTGGAACGGCCGGCACAGGAATAGGACTTGATGCCAGCTATGGGCTTGCCCAATGCCATGGAGATCTCTCCCCCCTCGAATGTGTGCTGTGTCATTCTCAAGCACGTACAGTGCTTCCCCAATGCTTCCCTTTCAATGGCGGCCGAACTTTCATCGATGGCTGCTTCATGAGGTTCGAAAACTATATCTTTTTTGATGAATATAAAGGACCCGAAGACACTGCAGTTTGCGGGAACTTGACCCAAAATGACCCCAACTACAGACAAGCAGCCAAGGAGGCAGTGATGCAAGTAGTCAATGTTGCACCAGGCAACAGAGGCTTTGCGAAAGCTCGAGTGGCTGTGGCCGGGAGAGCAAATGAGTCCGCCGCTTACGCTCTGGGTCAGTGCTGGAGAAGTTTGAACCGCAGCTCTTGCAGATTATGTTTGCAAATCGCCTCTGCTTCAATGTTGTCATGTTTACCTGTATCGGAAGGGCGAGCACTGAACACAGGCTGCTTCATGAGATACTCGAACACAGACTTCCTCAATAAGGACATAAAAAATAGTTCCAGAGGTAAAACTGATCCTGCCACACTAAGTGCCACAAGAACCGAATTGATAGTTTCGGTCCTGAGTTCTGTTGTTGTTTTGATAATCGGAGGAGCAATTGGTGCTTATATCTGGAAGCACAGATATATACAAAATAAAAGAAAAGGAGGTTCAACTGATGTGAAGAAGTTAGCAAAAACTCTTCAAGATAGTAACTTGAACTTCAAGTACTCCACCCTTGAAAAAGCTACCAACAATTTCAGCCTCGATAACAAGATTGGACAAGGGGGGTTTGGCTCTGTTTATAAGGGAACTCTACCTGATGGAAGAGAGATTGCTGTTAAGAGATTCTTCTTTGATAACAGACATAGAGCAGCAGATTTCTACAATGAAGTAAACATGATCAGCAGTGTCGAACATAAAAATCTTGTAAGGTTGCTTGGATGCAGTTGTTCTGGACCTGAAAGCCTACTTGTTTATGAATTCCTACCAAACAAGAGTCTCGATCGCTTCATTTTTGATACCAAGAACAGTAAAGCTCTTGATTGGGATAAGAGATTTAACATCATCATTGGAACAGTTGAAGGTTTAATATATCTACATGAAAATCCAAAGATCAAAATTATACACAGAGATATAAAGGCCAGTAATATCTTGCTGGATCAAAAGCTCCAGGCGAAAATAGCAGATTTTGGATTAGCAAGGTCTTTCCAAGAAAATAAGAGCCATATCAGCACCGCTGTTGCAGGAACCCTAGGATATATGGCTCCGGAGTATCTAGCTTATGGTCAGTTATCAGAAAAGGCTGATGTCTATAGCTTTGGAGTACTTTTGTTAGAAATTGTTGCAGGATTGCAATACAATGGCATTCAAGTCTCCGGAAACATTGAAAGTCTGGTCACTGCTATGTGGAGACATTTCCAAGCAGGCACAGTTGAGAGGTTATTTGATCCAAATCTCAACCTTCAGAATCACTACAACAAGAAAGTAAAAGATGAGGTATTGAGAGTGGTGCACATAGGGCTCTTGTGCATCCAGGAGATTCCTTCTCTACGACCAACAATGTCGAAGATAATGCGAATGCTGACAATGGAGGAGGAAGAGCTCCTTCCTCCACCCACCAAACCACCCTTCATGGATGAGATGACCATGGAACTTGATGACTCATGCAAGGACTCGCGATATTATTCCAATACGGAGGGCCCTTCTTCAACTGCTACGGTCAGCCATAGTGCTTTTTATCCCAGATAA 3699 45.72 MKTGSPLVPGCGLLIIISALLLLETSTVADPRSQTAKILCSTVLEHNTTAFVPNFVGTMQAISDQMRTGGFGVARVGKGPDANYGLAQCYGDLSLMDCVLCYAEARTVLPQCFPFNGGRIFLDGCFMRAENYSFYEEFSGPLDRAVCGNNSITNSVYGQSTRQAVARAVETAPNNGGYARIQVALPGTPNASVYLLAQCWRNLNRSSCTSCLQNASASILKCLPRSEARALNTGCFMRYSNVDFLNAEAQATRSRGTIVAIVVSLVSSVAVLVVGVLIGIYIWNNRYVNNKRRVLSDGREIAVKRLFFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLANRSLDRFIFDGERGKSLNWEKRFEIIVGTVEGLAYLHENSKNKIIHRDIKASNILLDSRLRAKIADFGLARSFEEDAWKHFQAGTMERIYDPNLMVEGDGSMKEEILRVVQIGLLCTQESASLRPTMSKVLQMLMKKEEKLPAPTNPPFMDERTMELNDTSEDPSYFNMTEASSSAATVTHSSFHPRKERERKAAIVESFDWRWCREVSFLTLRDCVSSGCFLQLLLLLLPLLSILLLLPTSTMGKPRDQTVKVMCGKELEHNTTAYVPNFFGSMEKVRQQIRTSGFGTAGTGIGLDASYGLAQCHGDLSPLECVLCHSQARTVLPQCFPFNGGRTFIDGCFMRFENYIFFDEYKGPEDTAVCGNLTQNDPNYRQAAKEAVMQVVNVAPGNRGFAKARVAVAGRANESAAYALGQCWRSLNRSSCRLCLQIASASMLSCLPVSEGRALNTGCFMRYSNTDFLNKDIKNSSRGKTDPATLSATRTELIVSVLSSVVVLIIGGAIGAYIWKHRYIQNKRKGGSTDVKKLAKTLQDSNLNFKYSTLEKATNNFSLDNKIGQGGFGSVYKGTLPDGREIAVKRFFFDNRHRAADFYNEVNMISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDTKNSKALDWDKRFNIIIGTVEGLIYLHENPKIKIIHRDIKASNILLDQKLQAKIADFGLARSFQENKSHISTAVAGTLGYMAPEYLAYGQLSEKADVYSFGVLLLEIVAGLQYNGIQVSGNIESLVTAMWRHFQAGTVERLFDPNLNLQNHYNKKVKDEVLRVVHIGLLCIQEIPSLRPTMSKIMRMLTMEEEELLPPPTKPPFMDEMTMELDDSCKDSRYYSNTEGPSSTATVSHSAFYPR 1232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 139384 146836 - Cp4.1LG11g00590.1 Cpe11g00025 476819
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00025 1232 Gene3D - 143 244 IPR038408 -
Cpe11g00025 1232 Gene3D - 713 814 IPR038408 -
Cpe11g00025 1232 Gene3D - 602 703 IPR038408 -
Cpe11g00025 1232 Gene3D - 33 134 IPR038408 -
Cpe11g00025 1232 ProSiteProfiles Protein kinase domain profile. 903 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00025 1232 SUPERFAMILY Protein kinase-like (PK-like) 295 505 IPR011009 -
Cpe11g00025 1232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1024 1036 IPR008271 GO:0004672|GO:0006468
Cpe11g00025 1232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Cpe11g00025 1232 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 14 293 - -
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 582 1212 - -
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 294 429 - -
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 429 521 - -
Cpe11g00025 1232 MobiDBLite consensus disorder prediction 1211 1232 - -
Cpe11g00025 1232 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Cpe11g00025 1232 ProSiteProfiles Protein kinase domain profile. 266 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 429 521 - -
Cpe11g00025 1232 Gene3D Phosphorylase Kinase; domain 1 285 351 - -
Cpe11g00025 1232 ProSiteProfiles Gnk2-homologous domain profile. 708 814 IPR002902 -
Cpe11g00025 1232 Pfam Salt stress response/antifungal 150 241 IPR002902 -
Cpe11g00025 1232 Pfam Salt stress response/antifungal 723 811 IPR002902 -
Cpe11g00025 1232 Pfam Salt stress response/antifungal 48 132 IPR002902 -
Cpe11g00025 1232 Pfam Salt stress response/antifungal 623 701 IPR002902 -
Cpe11g00025 1232 SUPERFAMILY Protein kinase-like (PK-like) 887 1199 IPR011009 -
Cpe11g00025 1232 SMART serkin_6 903 1180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00025 1232 CDD STKc_IRAK 909 1179 - -
Cpe11g00025 1232 ProSitePatterns Protein kinases ATP-binding region signature. 909 931 IPR017441 GO:0005524
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 14 293 - -
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 582 1212 - -
Cpe11g00025 1232 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 294 429 - -
Cpe11g00025 1232 Gene3D Phosphorylase Kinase; domain 1 864 978 - -
Cpe11g00025 1232 Pfam Protein kinase domain 904 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00025 1232 Gene3D Transferase(Phosphotransferase) domain 1 979 1186 - -
Cpe11g00025 1232 Gene3D Transferase(Phosphotransferase) domain 1 352 427 - -
Cpe11g00025 1232 Gene3D Transferase(Phosphotransferase) domain 1 428 500 - -
Cpe11g00025 1232 Pfam Protein tyrosine and serine/threonine kinase 297 430 IPR001245 GO:0004672|GO:0006468
Cpe11g00025 1232 MobiDBLite consensus disorder prediction 1208 1232 - -
Cpe11g00025 1232 ProSiteProfiles Gnk2-homologous domain profile. 602 703 IPR002902 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00576 Cpe-Chr3:3434589 Cpe11g00025 Cpe-Chr11:139384 5.73E-08 dispersed
Cpe11g00025 Cpe-Chr11:139384 Cpe15g00892 Cpe-Chr15:8578801 1.24E-34 dispersed
Cpe11g00025 Cpe-Chr11:139384 Cpe07g00019 Cpe-Chr7:116852 1.31E-178 wgd
Cpe11g00025 Cpe-Chr11:139384 Cpe09g00514 Cpe-Chr9:3425601 9.54E-07 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62694 PF00069 Pkinase 3.80E-46 CL0016 Cpe PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00025 - - cmax:111492443 2170.2