Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00037 ATGGACACGGTGTCCTCACAAAATGGAACAGAACGTGCTGTCGTCCCGCCGAGAGGTTGGAACTCTTATAATTCATTTTCCTGGATTATTTCTGAAGAAGAATACCTAAAGAATGCAGAGGTTGTGGCCAATCGGCTTAAGTCTAAGGGATATGAGTACGTGATTGTGGATTACCTATGGTATAGGAGAAATGTTCCTGGTGCTTACGCTGATTCTCTTGGATTTGATGTGATCGATGAATGGGGGAGGATGGTCCCGGACCCGAGTCGGTGGCCTTCCTCGCAAGGTGGAAAGGGATTCACTGAAGTAGCTAAGAAAGTTCATGATATGGGTTTGAAGTTTGGAATTCATGTCATGAGAGGAATAAGTACACAGGCAGTCAATGCTAATACGCCTATATTGGACATTTCAAAGGGAAGTGCCTATGAAGAATCCGGGAGAAAGTGGTTTGCAAGTGATATAGGGGACAAGTCGAGGACTTGTGGATGGATGAAAAATGGTTTCATGAGTGTGAACATGGATTTAGGAGCTTCAAAAGCCTTCTTAAGGTCCCTTTATCAACAATATGCTGATTGGGGGGTTGATTTTGTGAAACTTGATTGTGTCTTTGGCGATGATTTGGATTTACCTCAAATAAGCTTTGTGTCTGATGTTCTTAAACAACTTGACCGCCCAATATTGTTTTCTCTGTCCCCCGGAAAAACTGCGACGCCAGCCATGGCCAAGGATGTAAGTGGGCTGGTTAACATGTATAGAATAACAGGTGATGATTGGGATAATTGGAACGACCTCGTTTTCCACTTTAACATCACCCGGGATTTCTCTGCTGCTAATATGATAGGCACCACAGGCTTGCTGGGTAAATCTTGGCCTGATTCAGATATGCTTCCATTTGGGTGGCTTACCGATCCAGCTGCAAATGAAGGCCCACATAGGACAACCAACCTCAGCGTAGATGAACAAAGAACTCAGATGACTTTATGGTGTATGGCCAAGTCTCCAATTATGTATGGAGGAGATTTGAGGAATATTGACGATGCCACCTTTAGTCTCATCACAAATCCTACGCTTCTGGAGATTAACTCCTTCATTGCTTCAACAAAGGTTTCGAACAGTAGGGAGAAGATTGTGAAATGGCATTCTAGAGATATGGTGGCATCAGTTTCACCTGTACTGGGGCTCACCAAGTGTTCAGATTCAGACGCAGCTGGTTGGGTTCCTGAAAGTCTGAATCGAGGTCTTCAAAAAATATGTTGGAAGGCAAATCCAAAACACAAATATGAAACACCATTTTGTGTATATAAACGAGGGCCTCGACTTGCAATATACAAAGAGGCAGCTAGTGGGCATGATCGAGGGGATGTTTGCCTGGATGCAACTCGGCAAAGGAAGCGTAGTTCTGAAGAGTTCAGGAGGGGGTCATTTTTCCCTTGTATAAGGCATGAGAACCAGAAGTGGGAGTTATACAGTAATGGGACGTTGGGAAACCAGCAATCTGGGGAGTGTGCAATTGTAAAGCAAAACGATGCAGAAGGTATTGAGAGTGGAGTTCGGTCATGGATTGCTACAGGGAGAGGAGGTGAGGTATATGTTGCTCTCTTCAATCTCAACAACGAGAAGACTGAGATATCTGTGAAGATTTCGGACCTTGCGGAGGCACTTCCAGGCAAGGGCTTGGGTCAAGCTTCCTGTAAATACAGAGAGGAATGGAGTGGAAAAGAGTTTGGAGTGATGTCGGGATCTCTCTTCTTCCTCTATTTCACTACTTGCGATTCCTGGATCTCGAGCTTCAGCCAAGCCAAACCAAACGAGATACAAATGTCAAAACCCTGGGGTGGAATCGGAGCCTGGGCCGCTGATGCCGAGCGTGCTGAGGATGAGGAGCGAGAGGCGCAAGCTGCTGCGGCCGCTTCCCAAGCAGAATCCAAGAATTTCCCTAGCCTTAGGGAAGCCGTCAGCACCAAGCCCAAGAAAAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCATGGCGCCGGCGGTAGGCTAACGGACAGCCAGGGCTTGACCCCGGAGGAGATGATTCGGCTTCCAACTGGTCCAAAAGACCGCTCTGGTGAGGAAGTACGTTCTGGCCGGCTCGGTGGGGGATTTCCCACTTATGATCGCCAAGGTATGTCTGCTGGTCGATTTCGAGACCGTGATGATGGCGATGGGTCCTGGGGTGGTGGTCGACGATCTTATGGCGGGTTTGATGAGGAACGCAGGGGCTCATCTCCTAGGGCTTCCAATTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCGCCCACATTGGATTCAGGTCGACAAAATAGGTATGGGTCGCTAGGCGGTGGTGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCACGTGAGAAAAAGCCTATTCCATCGAGATCCTCCACATTCGGTTCCGGTTATCGTGAGGCGAATGAGCCTGATCGATGGGGTAGAGGCCGTTCACGTGATAGTGTCACAGAACGGCCCCGATTAGTGTTGGATCCACCCAAAGGTAATGTCGTAACAAATGAAGCAACAAGGACGAACAAGCCAAACCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCCGAGAAGGGATTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAAAACCAGTAGGCCAACTAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAACCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAACCTAGGGAGGTTTTGCTGGAGGAACGTGGCAAGGATTGGCGAAAGATAGATCTGCAACTTGAGCACCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAGGAGGAAATTAATGTTCTAAGAAAGGAACTTGAGGAAGGCTTACATCTGAATACCAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATGCAAAACCTGCGTGACAGAATAAATAAAAAAGAACGTGAACTGGAGACTTTGGTCCTTGATTTGGATGATAAAGTTCGGTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAAGGCTGCTGCCTTTCAAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATGGACAGACCTCGATCACGAGGCACTACAGATGTATGGAGTAGGTCTGCTGATGATAGAAAACCAATCCAAGGTGCCAGAGATGGAGGATTTTTGGGTAACAGAAACATAGAGAGGTCGAGGGATAGATGGGCTAAAAGATGA 3381 47.71 MDTVSSQNGTERAVVPPRGWNSYNSFSWIISEEEYLKNAEVVANRLKSKGYEYVIVDYLWYRRNVPGAYADSLGFDVIDEWGRMVPDPSRWPSSQGGKGFTEVAKKVHDMGLKFGIHVMRGISTQAVNANTPILDISKGSAYEESGRKWFASDIGDKSRTCGWMKNGFMSVNMDLGASKAFLRSLYQQYADWGVDFVKLDCVFGDDLDLPQISFVSDVLKQLDRPILFSLSPGKTATPAMAKDVSGLVNMYRITGDDWDNWNDLVFHFNITRDFSAANMIGTTGLLGKSWPDSDMLPFGWLTDPAANEGPHRTTNLSVDEQRTQMTLWCMAKSPIMYGGDLRNIDDATFSLITNPTLLEINSFIASTKVSNSREKIVKWHSRDMVASVSPVLGLTKCSDSDAAGWVPESLNRGLQKICWKANPKHKYETPFCVYKRGPRLAIYKEAASGHDRGDVCLDATRQRKRSSEEFRRGSFFPCIRHENQKWELYSNGTLGNQQSGECAIVKQNDAEGIESGVRSWIATGRGGEVYVALFNLNNEKTEISVKISDLAEALPGKGLGQASCKYREEWSGKEFGVMSGSLFFLYFTTCDSWISSFSQAKPNEIQMSKPWGGIGAWAADAERAEDEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGHGAGGRLTDSQGLTPEEMIRLPTGPKDRSGEEVRSGRLGGGFPTYDRQGMSAGRFRDRDDGDGSWGGGRRSYGGFDEERRGSSPRASNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGVGGIASRADEVDNWAREKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSVTERPRLVLDPPKGNVVTNEATRTNKPNPFGAARPREEVLAEKGLDWKKLDTEIEAKKTSRPTSAHSSRPSSAQSNRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEINVLRKELEEGLHLNTNKESVQESAGEMQNLRDRINKKERELETLVLDLDDKVRFGKKATERPGSGAGKAAAFQERPPSQGSFDESRSFESMDRPRSRGTTDVWSRSADDRKPIQGARDGGFLGNRNIERSRDRWAKR 1126
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 182688 193021 - Cp4.1LG11g00600.1 Cpe11g00037 476831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00037 1126 MobiDBLite consensus disorder prediction 833 852 - -
Cpe11g00037 1126 Pfam Plant specific eukaryotic initiation factor 4B 607 1109 IPR010433 GO:0003743
Cpe11g00037 1126 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 607 1123 IPR010433 GO:0003743
Cpe11g00037 1126 MobiDBLite consensus disorder prediction 724 738 - -
Cpe11g00037 1126 MobiDBLite consensus disorder prediction 909 928 - -
Cpe11g00037 1126 Coils Coil 1009 1036 - -
Cpe11g00037 1126 MobiDBLite consensus disorder prediction 1044 1126 - -
Cpe11g00037 1126 Pfam Alpha galactosidase A 174 361 IPR002241 GO:0004553|GO:0005975
Cpe11g00037 1126 Pfam Alpha galactosidase A 29 124 IPR002241 GO:0004553|GO:0005975
Cpe11g00037 1126 Coils Coil 621 641 - -
Cpe11g00037 1126 MobiDBLite consensus disorder prediction 1075 1104 - -
Cpe11g00037 1126 CDD GH27 16 361 IPR002241 GO:0004553|GO:0005975
Cpe11g00037 1126 Gene3D Aldolase class I 7 363 IPR013785 -
Cpe11g00037 1126 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 607 1123 - -
Cpe11g00037 1126 MobiDBLite consensus disorder prediction 882 908 - -
Cpe11g00037 1126 PRINTS Glycosyl hydrolase family 27 signature 319 340 IPR002241 GO:0004553|GO:0005975
Cpe11g00037 1126 PRINTS Glycosyl hydrolase family 27 signature 104 125 IPR002241 GO:0004553|GO:0005975
Cpe11g00037 1126 PRINTS Glycosyl hydrolase family 27 signature 10 29 IPR002241 GO:0004553|GO:0005975
Cpe11g00037 1126 MobiDBLite consensus disorder prediction 620 950 - -
Cpe11g00037 1126 SUPERFAMILY (Trans)glycosidases 13 361 IPR017853 -
Cpe11g00037 1126 Gene3D - 513 584 IPR013780 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01315 Cpe-Chr5:9243915 Cpe11g00037 Cpe-Chr11:182688 6.34E-30 dispersed
Cpe11g00037 Cpe-Chr11:182688 Cpe16g00301 Cpe-Chr16:4947554 1.15E-25 dispersed
Cpe01g00992 Cpe-Chr1:5883346 Cpe11g00037 Cpe-Chr11:182688 1.20E-11 transposed
Cpe07g00030 Cpe-Chr7:159340 Cpe11g00037 Cpe-Chr11:182688 0 transposed
Cpe09g00463 Cpe-Chr9:3025933 Cpe11g00037 Cpe-Chr11:182688 1.48E-08 transposed
Cpe09g00484 Cpe-Chr9:3195596 Cpe11g00037 Cpe-Chr11:182688 7.37E-13 transposed
Cpe11g00037 Cpe-Chr11:182688 Cpe07g00029 Cpe-Chr7:153899 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00037 - - cmos:111454511 946.421