Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00037 | ATGGACACGGTGTCCTCACAAAATGGAACAGAACGTGCTGTCGTCCCGCCGAGAGGTTGGAACTCTTATAATTCATTTTCCTGGATTATTTCTGAAGAAGAATACCTAAAGAATGCAGAGGTTGTGGCCAATCGGCTTAAGTCTAAGGGATATGAGTACGTGATTGTGGATTACCTATGGTATAGGAGAAATGTTCCTGGTGCTTACGCTGATTCTCTTGGATTTGATGTGATCGATGAATGGGGGAGGATGGTCCCGGACCCGAGTCGGTGGCCTTCCTCGCAAGGTGGAAAGGGATTCACTGAAGTAGCTAAGAAAGTTCATGATATGGGTTTGAAGTTTGGAATTCATGTCATGAGAGGAATAAGTACACAGGCAGTCAATGCTAATACGCCTATATTGGACATTTCAAAGGGAAGTGCCTATGAAGAATCCGGGAGAAAGTGGTTTGCAAGTGATATAGGGGACAAGTCGAGGACTTGTGGATGGATGAAAAATGGTTTCATGAGTGTGAACATGGATTTAGGAGCTTCAAAAGCCTTCTTAAGGTCCCTTTATCAACAATATGCTGATTGGGGGGTTGATTTTGTGAAACTTGATTGTGTCTTTGGCGATGATTTGGATTTACCTCAAATAAGCTTTGTGTCTGATGTTCTTAAACAACTTGACCGCCCAATATTGTTTTCTCTGTCCCCCGGAAAAACTGCGACGCCAGCCATGGCCAAGGATGTAAGTGGGCTGGTTAACATGTATAGAATAACAGGTGATGATTGGGATAATTGGAACGACCTCGTTTTCCACTTTAACATCACCCGGGATTTCTCTGCTGCTAATATGATAGGCACCACAGGCTTGCTGGGTAAATCTTGGCCTGATTCAGATATGCTTCCATTTGGGTGGCTTACCGATCCAGCTGCAAATGAAGGCCCACATAGGACAACCAACCTCAGCGTAGATGAACAAAGAACTCAGATGACTTTATGGTGTATGGCCAAGTCTCCAATTATGTATGGAGGAGATTTGAGGAATATTGACGATGCCACCTTTAGTCTCATCACAAATCCTACGCTTCTGGAGATTAACTCCTTCATTGCTTCAACAAAGGTTTCGAACAGTAGGGAGAAGATTGTGAAATGGCATTCTAGAGATATGGTGGCATCAGTTTCACCTGTACTGGGGCTCACCAAGTGTTCAGATTCAGACGCAGCTGGTTGGGTTCCTGAAAGTCTGAATCGAGGTCTTCAAAAAATATGTTGGAAGGCAAATCCAAAACACAAATATGAAACACCATTTTGTGTATATAAACGAGGGCCTCGACTTGCAATATACAAAGAGGCAGCTAGTGGGCATGATCGAGGGGATGTTTGCCTGGATGCAACTCGGCAAAGGAAGCGTAGTTCTGAAGAGTTCAGGAGGGGGTCATTTTTCCCTTGTATAAGGCATGAGAACCAGAAGTGGGAGTTATACAGTAATGGGACGTTGGGAAACCAGCAATCTGGGGAGTGTGCAATTGTAAAGCAAAACGATGCAGAAGGTATTGAGAGTGGAGTTCGGTCATGGATTGCTACAGGGAGAGGAGGTGAGGTATATGTTGCTCTCTTCAATCTCAACAACGAGAAGACTGAGATATCTGTGAAGATTTCGGACCTTGCGGAGGCACTTCCAGGCAAGGGCTTGGGTCAAGCTTCCTGTAAATACAGAGAGGAATGGAGTGGAAAAGAGTTTGGAGTGATGTCGGGATCTCTCTTCTTCCTCTATTTCACTACTTGCGATTCCTGGATCTCGAGCTTCAGCCAAGCCAAACCAAACGAGATACAAATGTCAAAACCCTGGGGTGGAATCGGAGCCTGGGCCGCTGATGCCGAGCGTGCTGAGGATGAGGAGCGAGAGGCGCAAGCTGCTGCGGCCGCTTCCCAAGCAGAATCCAAGAATTTCCCTAGCCTTAGGGAAGCCGTCAGCACCAAGCCCAAGAAAAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCATGGCGCCGGCGGTAGGCTAACGGACAGCCAGGGCTTGACCCCGGAGGAGATGATTCGGCTTCCAACTGGTCCAAAAGACCGCTCTGGTGAGGAAGTACGTTCTGGCCGGCTCGGTGGGGGATTTCCCACTTATGATCGCCAAGGTATGTCTGCTGGTCGATTTCGAGACCGTGATGATGGCGATGGGTCCTGGGGTGGTGGTCGACGATCTTATGGCGGGTTTGATGAGGAACGCAGGGGCTCATCTCCTAGGGCTTCCAATTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCGCCCACATTGGATTCAGGTCGACAAAATAGGTATGGGTCGCTAGGCGGTGGTGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCACGTGAGAAAAAGCCTATTCCATCGAGATCCTCCACATTCGGTTCCGGTTATCGTGAGGCGAATGAGCCTGATCGATGGGGTAGAGGCCGTTCACGTGATAGTGTCACAGAACGGCCCCGATTAGTGTTGGATCCACCCAAAGGTAATGTCGTAACAAATGAAGCAACAAGGACGAACAAGCCAAACCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCCGAGAAGGGATTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAAAACCAGTAGGCCAACTAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAACCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAACCTAGGGAGGTTTTGCTGGAGGAACGTGGCAAGGATTGGCGAAAGATAGATCTGCAACTTGAGCACCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAGGAGGAAATTAATGTTCTAAGAAAGGAACTTGAGGAAGGCTTACATCTGAATACCAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATGCAAAACCTGCGTGACAGAATAAATAAAAAAGAACGTGAACTGGAGACTTTGGTCCTTGATTTGGATGATAAAGTTCGGTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAAGGCTGCTGCCTTTCAAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATGGACAGACCTCGATCACGAGGCACTACAGATGTATGGAGTAGGTCTGCTGATGATAGAAAACCAATCCAAGGTGCCAGAGATGGAGGATTTTTGGGTAACAGAAACATAGAGAGGTCGAGGGATAGATGGGCTAAAAGATGA | 3381 | 47.71 | MDTVSSQNGTERAVVPPRGWNSYNSFSWIISEEEYLKNAEVVANRLKSKGYEYVIVDYLWYRRNVPGAYADSLGFDVIDEWGRMVPDPSRWPSSQGGKGFTEVAKKVHDMGLKFGIHVMRGISTQAVNANTPILDISKGSAYEESGRKWFASDIGDKSRTCGWMKNGFMSVNMDLGASKAFLRSLYQQYADWGVDFVKLDCVFGDDLDLPQISFVSDVLKQLDRPILFSLSPGKTATPAMAKDVSGLVNMYRITGDDWDNWNDLVFHFNITRDFSAANMIGTTGLLGKSWPDSDMLPFGWLTDPAANEGPHRTTNLSVDEQRTQMTLWCMAKSPIMYGGDLRNIDDATFSLITNPTLLEINSFIASTKVSNSREKIVKWHSRDMVASVSPVLGLTKCSDSDAAGWVPESLNRGLQKICWKANPKHKYETPFCVYKRGPRLAIYKEAASGHDRGDVCLDATRQRKRSSEEFRRGSFFPCIRHENQKWELYSNGTLGNQQSGECAIVKQNDAEGIESGVRSWIATGRGGEVYVALFNLNNEKTEISVKISDLAEALPGKGLGQASCKYREEWSGKEFGVMSGSLFFLYFTTCDSWISSFSQAKPNEIQMSKPWGGIGAWAADAERAEDEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGHGAGGRLTDSQGLTPEEMIRLPTGPKDRSGEEVRSGRLGGGFPTYDRQGMSAGRFRDRDDGDGSWGGGRRSYGGFDEERRGSSPRASNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGVGGIASRADEVDNWAREKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSVTERPRLVLDPPKGNVVTNEATRTNKPNPFGAARPREEVLAEKGLDWKKLDTEIEAKKTSRPTSAHSSRPSSAQSNRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEINVLRKELEEGLHLNTNKESVQESAGEMQNLRDRINKKERELETLVLDLDDKVRFGKKATERPGSGAGKAAAFQERPPSQGSFDESRSFESMDRPRSRGTTDVWSRSADDRKPIQGARDGGFLGNRNIERSRDRWAKR | 1126 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 182688 | 193021 | - | Cp4.1LG11g00600.1 | Cpe11g00037 | 476831 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00037 | 1126 | MobiDBLite | consensus disorder prediction | 833 | 852 | - | - | |
Cpe11g00037 | 1126 | Pfam | Plant specific eukaryotic initiation factor 4B | 607 | 1109 | IPR010433 | GO:0003743 | |
Cpe11g00037 | 1126 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 607 | 1123 | IPR010433 | GO:0003743 | |
Cpe11g00037 | 1126 | MobiDBLite | consensus disorder prediction | 724 | 738 | - | - | |
Cpe11g00037 | 1126 | MobiDBLite | consensus disorder prediction | 909 | 928 | - | - | |
Cpe11g00037 | 1126 | Coils | Coil | 1009 | 1036 | - | - | |
Cpe11g00037 | 1126 | MobiDBLite | consensus disorder prediction | 1044 | 1126 | - | - | |
Cpe11g00037 | 1126 | Pfam | Alpha galactosidase A | 174 | 361 | IPR002241 | GO:0004553|GO:0005975 | |
Cpe11g00037 | 1126 | Pfam | Alpha galactosidase A | 29 | 124 | IPR002241 | GO:0004553|GO:0005975 | |
Cpe11g00037 | 1126 | Coils | Coil | 621 | 641 | - | - | |
Cpe11g00037 | 1126 | MobiDBLite | consensus disorder prediction | 1075 | 1104 | - | - | |
Cpe11g00037 | 1126 | CDD | GH27 | 16 | 361 | IPR002241 | GO:0004553|GO:0005975 | |
Cpe11g00037 | 1126 | Gene3D | Aldolase class I | 7 | 363 | IPR013785 | - | |
Cpe11g00037 | 1126 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 | 607 | 1123 | - | - | |
Cpe11g00037 | 1126 | MobiDBLite | consensus disorder prediction | 882 | 908 | - | - | |
Cpe11g00037 | 1126 | PRINTS | Glycosyl hydrolase family 27 signature | 319 | 340 | IPR002241 | GO:0004553|GO:0005975 | |
Cpe11g00037 | 1126 | PRINTS | Glycosyl hydrolase family 27 signature | 104 | 125 | IPR002241 | GO:0004553|GO:0005975 | |
Cpe11g00037 | 1126 | PRINTS | Glycosyl hydrolase family 27 signature | 10 | 29 | IPR002241 | GO:0004553|GO:0005975 | |
Cpe11g00037 | 1126 | MobiDBLite | consensus disorder prediction | 620 | 950 | - | - | |
Cpe11g00037 | 1126 | SUPERFAMILY | (Trans)glycosidases | 13 | 361 | IPR017853 | - | |
Cpe11g00037 | 1126 | Gene3D | - | 513 | 584 | IPR013780 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g01315 | Cpe-Chr5:9243915 | Cpe11g00037 | Cpe-Chr11:182688 | 6.34E-30 | dispersed | |
Cpe11g00037 | Cpe-Chr11:182688 | Cpe16g00301 | Cpe-Chr16:4947554 | 1.15E-25 | dispersed | |
Cpe01g00992 | Cpe-Chr1:5883346 | Cpe11g00037 | Cpe-Chr11:182688 | 1.20E-11 | transposed | |
Cpe07g00030 | Cpe-Chr7:159340 | Cpe11g00037 | Cpe-Chr11:182688 | 0 | transposed | |
Cpe09g00463 | Cpe-Chr9:3025933 | Cpe11g00037 | Cpe-Chr11:182688 | 1.48E-08 | transposed | |
Cpe09g00484 | Cpe-Chr9:3195596 | Cpe11g00037 | Cpe-Chr11:182688 | 7.37E-13 | transposed | |
Cpe11g00037 | Cpe-Chr11:182688 | Cpe07g00029 | Cpe-Chr7:153899 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00037 | - | - | cmos:111454511 | 946.421 |