Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00044 ATGGCTTCCGTCTCATTTTACCGCCCAAATTTTGTGTTCTCTTCATTTCCGAACCGTGTTCCGACCTCAAATCCTCTATTTCATGGAGTCCAATTCCGAGGTTTATCCCACCATAAGCCTTTCCTTCGTGGTTCCCTTGCGGTGGCGAGATTTGGGTTTCAACCCGAGTTCTTGCCTGACCCGGATCACGCCGAGGGCTTTGTGAGAGAGTTATTCGGCAAAGCTGAGAGCGTTCTTTACACGATTGCCGACGCCGCCGTGTCTGCTTCTCCGGAGGATGTTACCACCGCCAAACAGACGGAGGATTGGTTTACGGGGATCACCAATTATATGGAGAGCGTCCTTAAAATTCTTAAGGATGGCCTTTCTGCTGTACATGTTCCTTATGCCTATGGTTTTGCCATTATACTCCTTACAGTTCTTGTTAAGGCTGCTACGTTTCCTTTGACGAAGAAGCAGGTAGAATCTGCAATGGTGATGCGTTCTTTGCAACCGCAAGTGAAGGCTGTTCAGCAACGCTACGCTGGGGATCAGGAGAGGATTCAAATTGAGACCGCTCGACTGTACAAATTAGCTGGCATAAACCCACTGGCAGGTGCTAAAATTGTGCCTGTTTTTAGAGATATAGTTACTCTGATAAATTTAGTAGGTCTCCTAACGGAAGGTTTTTTCTGGATACCCTCTCTGGCTGGTCCAACCACAATTGCTTCTCGACAAAATGGGAGCGGTATCTCTTGGCTCTTTCCATTTGTTGATGGCCATCCACCACTTGGGTGGTCAGATACTTTTGCGTATCTTGTCCTGCCGGTGTTGCTGGTCGTCTCACAGTACATCTCTGTTCAAATTATGCAATCGTCGCAGAATAATGATCCAAACATGAAGAGTTCTCAAGCCATATCGAAGTTCCTACCGTTAATGATCGGATATTTTGCACTTTCAGTTCCTTCTGGTCTAAGCCTTTACTGGCTTACCAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTTAGGTGGTGCGAAAACCCCGGACAAACAATTGATTGATGAAATCATGAAACAAGAACAACCCCAAATCCAGAGCCAAGCGCCCAAGTTAGACTCAACCTCGAGTAGCACGGTAGCTCGACAAGAAGAGAAGCTGACAGCAGAAGGGCTAAAACCTGGTGAAAGATTTAAACAGATAAAGGAGCAAGAGGCTAGGATGAGACAGCAAAGTGAAGAAGAAAAAAGGAAAGCTGAAGAGGCAGCCGAGAGTGCCATTGTTGGAGTTGGTGTCAATGGCAGTCTTTCTAGAACGGATGTAAAGGAAGACCAAGGCTCCATATCTATGTCTACCATGCAACGAACAGATGTGGAAAACAAGCCAAGTGCAACTCCAGGGGAGGGAGTACACGAGACATACACTGGAGTGGCCAAGGATGCCAAACTAAAGGGAGAAGAACAAAGAGAGTAA 1461 46.48 MASVSFYRPNFVFSSFPNRVPTSNPLFHGVQFRGLSHHKPFLRGSLAVARFGFQPEFLPDPDHAEGFVRELFGKAESVLYTIADAAVSASPEDVTTAKQTEDWFTGITNYMESVLKILKDGLSAVHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMVMRSLQPQVKAVQQRYAGDQERIQIETARLYKLAGINPLAGAKIVPVFRDIVTLINLVGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPNMKSSQAISKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKLGGAKTPDKQLIDEIMKQEQPQIQSQAPKLDSTSSSTVARQEEKLTAEGLKPGERFKQIKEQEARMRQQSEEEKRKAEEAAESAIVGVGVNGSLSRTDVKEDQGSISMSTMQRTDVENKPSATPGEGVHETYTGVAKDAKLKGEEQRE 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 225665 230389 - Cp4.1LG11g00470.1 Cpe11g00044 476838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00044 486 MobiDBLite consensus disorder prediction 357 395 - -
Cpe11g00044 486 PANTHER BNAA09G28180D PROTEIN 48 480 - -
Cpe11g00044 486 PANTHER OXA1 48 480 IPR001708 GO:0016021|GO:0032977
Cpe11g00044 486 Coils Coil 394 421 - -
Cpe11g00044 486 Pfam 60Kd inner membrane protein 131 338 IPR001708 GO:0016021|GO:0032977
Cpe11g00044 486 MobiDBLite consensus disorder prediction 434 457 - -
Cpe11g00044 486 MobiDBLite consensus disorder prediction 471 486 - -
Cpe11g00044 486 MobiDBLite consensus disorder prediction 400 419 - -
Cpe11g00044 486 MobiDBLite consensus disorder prediction 424 486 - -
Cpe11g00044 486 MobiDBLite consensus disorder prediction 357 380 - -
Cpe11g00044 486 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 131 338 IPR028055 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01243 Cpe-Chr2:11164738 Cpe11g00044 Cpe-Chr11:225665 1.20E-119 dispersed
Cpe11g00044 Cpe-Chr11:225665 Cpe01g00619 Cpe-Chr1:3570770 1.05E-08 dispersed
Cpe11g00044 Cpe-Chr11:225665 Cpe07g00037 Cpe-Chr7:190659 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00044 K03217 - csv:101205346 798.89