Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00054 ATGTACTTGTCTGATAAGCCTCGCCCAATCGATATTTACAAGGAAGAAGCTAGCAGAGATATGATGATCGAGGTCGCCTCCAATGCCGACCACCATATTCAACCTCATCAGCCACAGCCGACTCATCAGCAGCACCAAATGATGCTCGGCGATAGCAGTGGTGAGGATCATGAAGTCAAGGCTCCGAAGAAGCGGGCGGAGACCTGGGTTCAGGATGAGACTCGAAGCTTAATTGCCCTACGCCGGGAGATGGATGGTTTGTTCAATACCTCGAAATCCAACAAGCATTTGTGGGAGCAGATATCGGCTAAGATGAGGGAAAGGGGCTTTGATCGCTCTCCGACTATGTGTACTGACAAATGGAGGAACTTGCTCAAGGAGTTCAAGAAGGCAAAGCACCAGGATAGGGGAAGTGGCTCTGCTAAGATGTCGTATTACAAGGAGATTGAAGAAATTTTGAAGGAGAGAAGCAAAAGTACGCAGTACAAGAGCCCCACGCCACCCAAGATTGATTCATATATTCAATTCTCGGACAAAGGTAGAAGTTTCGAATTGCTATTTTTGGGGCCTGCATTCTTTAAGTCTGTTGAATATGATGTGCAAATAGTAGGAATAGAGGATAATGGTCTAACTTTCGGACCCGTTGAAGGTGGCAGGCCTTCACTCAATCTTGAAAGACAGCTAGATCATGATGGACATCCCCTTGCCATCACAGCAGCTGATGCAGTTGCTGCAACGGGCATTCCACCTTGGAATTGGAGAGAGGCACCCGGAAATGATGGGGAGAGTCAGGCATTTGGCGGGAGAGTAATATCAGTCAAGTGGGGGGACTACACAAGAAGAATCGGTATTGATGGCACCTCAGAGGCCATCAAAGAGGCAATCAAATCTGCATTCAGGTTGAGAACTAAACGTGCATTTTGGTTAGAGGATGAGGACCAGGTTGTCAGAAGTCTGGACAGGGACATGCCTTTAGGAAACTACACTCTTCACCTTGATGAAGGGTTGGCTGTGAAAATCTGCCTCTATGATGAATCTGATCACTTACCGGTACATACCGAAGAAAAAATATTTTACATTGAAGAAGATTACCGAGATTTTTTAACTCGTCGGGGCTGGACATGTCTTCGGGAGTTTGATGGGTACAGAAACATCGATACTATGGATGATCTTCGTCCTGGTGCAATATACCGCGGTATAAGTTGA 1206 46.43 MYLSDKPRPIDIYKEEASRDMMIEVASNADHHIQPHQPQPTHQQHQMMLGDSSGEDHEVKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILKERSKSTQYKSPTPPKIDSYIQFSDKGRSFELLFLGPAFFKSVEYDVQIVGIEDNGLTFGPVEGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREAPGNDGESQAFGGRVISVKWGDYTRRIGIDGTSEAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGLAVKICLYDESDHLPVHTEEKIFYIEEDYRDFLTRRGWTCLREFDGYRNIDTMDDLRPGAIYRGIS 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 285130 289926 + Cp4.1LG11g00490.1 Cpe11g00054 476848

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00054 401 MobiDBLite consensus disorder prediction 34 50 - -
Cpe11g00054 401 ProSiteProfiles Myb-like domain profile. 61 125 IPR001005 -
Cpe11g00054 401 PANTHER - 5 190 - -
Cpe11g00054 401 SMART sant 65 127 IPR001005 -
Cpe11g00054 401 PANTHER - 204 400 - -
Cpe11g00054 401 Gene3D - 69 131 - -
Cpe11g00054 401 MobiDBLite consensus disorder prediction 34 67 - -
Cpe11g00054 401 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 204 400 - -
Cpe11g00054 401 MobiDBLite consensus disorder prediction 51 67 - -
Cpe11g00054 401 CDD GT1 67 132 - -
Cpe11g00054 401 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 190 - -
Cpe11g00054 401 Pfam Myb/SANT-like DNA-binding domain 68 152 IPR044822 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00054 - - - csv:101222888 683.33
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00956 Cpe-Chr10:5403241 Cpe11g00054 Cpe-Chr11:285130 2.01E-11 dispersed
Cpe11g00054 Cpe-Chr11:285130 Cpe20g00654 Cpe-Chr20:4154198 5.86E-11 dispersed
Cpe11g00054 Cpe-Chr11:285130 Cpe07g00047 Cpe-Chr7:224772 1.33E-34 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cpe02g00154 . 61 399 Trihelix Transcription Factor Family AT1G12040 59.3 5.1e-44 176.8
Cpe11g01106 CCT,CST 87 267 Trihelix Transcription Factor Family AT1G12040 64.6 1.6e-42 171.8
Cpe07g00999 CCT,CST 61 235 Trihelix Transcription Factor Family AT1G12040 65.7 3.4e-40 164.1
Cpe04g01144 . 46 220 Trihelix Transcription Factor Family AT1G12040 64.0 2.2e-39 161.4
Cpe18g00446 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 64.6 1.1e-38 159.1
Cpe04g01144 . 25 400 Trihelix Transcription Factor Family AT4G18670 82.4 7.6e-68 256.1
Cpe18g00446 CCT 8 414 Trihelix Transcription Factor Family AT4G18670 78.5 2.7e-65 247.7
Cpe11g01106 CCT,CST 75 451 Trihelix Transcription Factor Family AT4G18670 82.8 4.6e-65 246.9
Cpe07g00999 CCT,CST 41 396 Trihelix Transcription Factor Family AT4G18670 83.7 2.2e-59 228.0
Cpe02g00154 . 21 218 Trihelix Transcription Factor Family AT4G18670 61.8 8.8e-40 162.9
Cpe17g00367 . 7 161 Trihelix Transcription Factor Family AT4G18670 54.9 3.3e-39 161.0
Cpe08g00278 CST 36 369 Trihelix Transcription Factor Family AT4G18670 71.6 1.2e-36 152.5
Cpe12g00384 . 30 157 Trihelix Transcription Factor Family AT4G18670 59.4 5.9e-36 150.2
Cpe02g00154 . 2 395 Trihelix Transcription Factor Family AT3G19020 61.2 1.1e-54 212.6
Cpe12g00384 . 13 391 Trihelix Transcription Factor Family AT3G19020 62.3 1.5e-48 192.2
Cpe17g00367 . 18 160 Trihelix Transcription Factor Family AT3G19020 63.0 1.4e-46 185.7
Cpe18g00446 CCT 32 228 Trihelix Transcription Factor Family AT3G19020 73.4 3.7e-44 177.6
Cpe11g01106 CCT,CST 75 436 Trihelix Transcription Factor Family AT3G19020 75.3 3.5e-42 171.0
Cpe04g01144 . 28 391 Trihelix Transcription Factor Family AT3G19020 73.5 4.6e-42 170.6
Cpe07g00999 CCT,CST 43 235 Trihelix Transcription Factor Family AT3G19020 71.8 1.9e-40 165.2
Cpe02g00154 . 7 396 Trihelix Transcription Factor Family AT1G49490 60.4 1.0e-48 192.6
Cpe04g01144 . 57 394 Trihelix Transcription Factor Family AT1G49490 75.1 2.6e-44 177.9
Cpe18g00446 CCT 65 401 Trihelix Transcription Factor Family AT1G49490 77.1 1.7e-43 175.3
Cpe11g01106 CCT,CST 104 436 Trihelix Transcription Factor Family AT1G49490 76.9 8.4e-43 172.9
Cpe12g00384 . 13 391 Trihelix Transcription Factor Family AT1G49490 59.6 3.5e-41 167.5
Cpe07g00999 CCT,CST 72 235 Trihelix Transcription Factor Family AT1G49490 80.5 1.1e-39 162.5
Cpe17g00367 . 64 161 Trihelix Transcription Factor Family AT1G49490 70.4 1.6e-38 158.7
Cpe02g00154 . 15 416 Trihelix Transcription Factor Family AT2G15880 62.2 8.2e-63 239.2
Cpe12g00384 . 30 391 Trihelix Transcription Factor Family AT2G15880 65.5 1.8e-54 211.5
Cpe17g00367 . 1077 1417 Trihelix Transcription Factor Family AT2G15880 62.6 1.4e-46 185.3
Cpe04g01144 . 27 398 Trihelix Transcription Factor Family AT2G15880 68.1 5.0e-44 176.8
Cpe11g01106 CCT,CST 75 451 Trihelix Transcription Factor Family AT2G15880 67.1 4.7e-42 170.2
Cpe18g00446 CCT 35 407 Trihelix Transcription Factor Family AT2G15880 68.1 1.1e-40 165.6
Cpe08g00278 CST 42 367 Trihelix Transcription Factor Family AT2G15880 68.2 1.0e-36 152.5
Cpe07g00999 CCT,CST 43 237 Trihelix Transcription Factor Family AT2G15880 68.0 1.3e-36 152.1
Cpe02g00154 . 5 409 Trihelix Transcription Factor Family AT4G33970 58.9 8.7e-54 209.1
Cpe12g00384 . 21 409 Trihelix Transcription Factor Family AT4G33970 62.1 3.8e-49 193.7
Cpe17g00367 . 1077 1412 Trihelix Transcription Factor Family AT4G33970 60.1 1.5e-37 155.2
Cpe04g01144 . 28 400 Trihelix Transcription Factor Family AT4G33970 67.1 9.7e-37 152.5
Cpe18g00446 CCT 35 407 Trihelix Transcription Factor Family AT4G33970 67.6 2.8e-36 151.0
Cpe07g00047 . 4 195 Trihelix Transcription Factor Family AT1G13450 62.4 1.2e-68 256.9
Cpe11g00054 . 1 222 Trihelix Transcription Factor Family AT1G13450 54.8 5.7e-63 238.0
Cpe03g00048 CCT 46 292 Trihelix Transcription Factor Family AT5G01380 57.7 1.8e-49 193.7
Cpe08g01227 CCT,CST 52 295 Trihelix Transcription Factor Family AT5G01380 57.7 3.9e-49 192.6
Cpe05g00748 . 101 600 Trihelix Transcription Factor Family AT1G33240 51.4 4.4e-91 332.8
Cpe06g00878 . 62 502 Trihelix Transcription Factor Family AT1G33240 51.2 3.9e-79 293.1
Cpe04g01144 . 25 400 Trihelix Transcription Factor Family AT4G18670 82.4 7.6e-68 256.1
Cpe18g00446 CCT 8 414 Trihelix Transcription Factor Family AT4G18670 78.5 2.7e-65 247.7
Cpe11g01106 CCT,CST 75 451 Trihelix Transcription Factor Family AT4G18670 82.8 4.6e-65 246.9
Cpe07g00999 CCT,CST 41 396 Trihelix Transcription Factor Family AT4G18670 83.7 2.2e-59 228.0
Cpe02g00154 . 21 218 Trihelix Transcription Factor Family AT4G18670 61.8 8.8e-40 162.9
Cpe17g00367 . 7 161 Trihelix Transcription Factor Family AT4G18670 54.9 3.3e-39 161.0
Cpe08g00278 CST 36 369 Trihelix Transcription Factor Family AT4G18670 71.6 1.2e-36 152.5
Cpe12g00384 . 30 157 Trihelix Transcription Factor Family AT4G18670 59.4 5.9e-36 150.2
Cpe02g00154 . 5 409 Trihelix Transcription Factor Family AT4G33970 58.9 8.7e-54 209.1
Cpe12g00384 . 21 409 Trihelix Transcription Factor Family AT4G33970 62.1 3.8e-49 193.7
Cpe17g00367 . 1077 1412 Trihelix Transcription Factor Family AT4G33970 60.1 1.5e-37 155.2
Cpe04g01144 . 28 400 Trihelix Transcription Factor Family AT4G33970 67.1 9.7e-37 152.5
Cpe18g00446 CCT 35 407 Trihelix Transcription Factor Family AT4G33970 67.6 2.8e-36 151.0
Cpe06g00878 . 57 502 Trihelix Transcription Factor Family AT1G76880 61.2 2.2e-114 410.2
Cpe03g00245 CCT 134 407 Trihelix Transcription Factor Family AT3G10000 52.9 3.1e-63 240.0
Cpe02g00154 . 2 395 Trihelix Transcription Factor Family AT3G19020 61.2 1.1e-54 212.6
Cpe12g00384 . 13 391 Trihelix Transcription Factor Family AT3G19020 62.3 1.5e-48 192.2
Cpe17g00367 . 18 160 Trihelix Transcription Factor Family AT3G19020 63.0 1.4e-46 185.7
Cpe18g00446 CCT 32 228 Trihelix Transcription Factor Family AT3G19020 73.4 3.7e-44 177.6
Cpe11g01106 CCT,CST 75 436 Trihelix Transcription Factor Family AT3G19020 75.3 3.5e-42 171.0
Cpe04g01144 . 28 391 Trihelix Transcription Factor Family AT3G19020 73.5 4.6e-42 170.6
Cpe07g00999 CCT,CST 43 235 Trihelix Transcription Factor Family AT3G19020 71.8 1.9e-40 165.2
Cpe02g00154 . 7 396 Trihelix Transcription Factor Family AT1G49490 60.4 1.0e-48 192.6
Cpe04g01144 . 57 394 Trihelix Transcription Factor Family AT1G49490 75.1 2.6e-44 177.9
Cpe18g00446 CCT 65 401 Trihelix Transcription Factor Family AT1G49490 77.1 1.7e-43 175.3
Cpe11g01106 CCT,CST 104 436 Trihelix Transcription Factor Family AT1G49490 76.9 8.4e-43 172.9
Cpe12g00384 . 13 391 Trihelix Transcription Factor Family AT1G49490 59.6 3.5e-41 167.5
Cpe07g00999 CCT,CST 72 235 Trihelix Transcription Factor Family AT1G49490 80.5 1.1e-39 162.5
Cpe17g00367 . 64 161 Trihelix Transcription Factor Family AT1G49490 70.4 1.6e-38 158.7
Cpe05g01252 . 294 582 Trihelix Transcription Factor Family AT1G68690 61.9 1.2e-105 381.3
Cpe04g01128 CCT,CST 235 494 Trihelix Transcription Factor Family AT1G68690 59.0 6.7e-96 349.0
Cpe18g00431 CCT,CST 332 591 Trihelix Transcription Factor Family AT1G68690 59.4 1.5e-95 347.8
Cpe09g00257 . 3 200 Trihelix Transcription Factor Family AT1G68690 67.4 1.0e-80 298.5
Cpe17g00482 . 713 994 Trihelix Transcription Factor Family AT1G68690 54.4 7.4e-79 292.4
Cpe15g00537 CST 142 365 Trihelix Transcription Factor Family AT1G68690 54.5 2.4e-69 260.8
Cpe07g01010 CCT 289 468 Trihelix Transcription Factor Family AT1G68690 66.7 5.3e-69 259.6
Cpe16g00234 . 337 495 Trihelix Transcription Factor Family AT1G68690 64.8 5.0e-59 226.5
Cpe01g00667 . 141 481 Trihelix Transcription Factor Family AT1G26150 51.5 4.2e-95 346.3
Cpe05g01252 . 295 528 Trihelix Transcription Factor Family AT1G26150 66.7 1.4e-93 341.3
Cpe04g01128 CCT,CST 232 440 Trihelix Transcription Factor Family AT1G26150 60.0 3.6e-78 290.0
Cpe18g00431 CCT,CST 333 537 Trihelix Transcription Factor Family AT1G26150 59.0 5.2e-77 286.2
Cpe04g00123 CST 142 370 Trihelix Transcription Factor Family AT1G26150 54.6 1.9e-71 267.7
Cpe17g00482 . 713 943 Trihelix Transcription Factor Family AT1G26150 58.4 5.6e-71 266.2
Cpe15g00537 CST 142 365 Trihelix Transcription Factor Family AT1G26150 55.8 6.1e-70 262.7
Cpe11g00144 . 170 399 Trihelix Transcription Factor Family AT1G26150 53.9 3.1e-69 260.4
Cpe16g00727 . 175 404 Trihelix Transcription Factor Family AT1G26150 54.7 6.8e-69 259.2
Cpe01g00002 . 717 946 Trihelix Transcription Factor Family AT1G26150 53.0 8.9e-69 258.8
Cpe19g00628 CCT,ECH 174 403 Trihelix Transcription Factor Family AT1G26150 51.3 1.5e-68 258.1
Cpe10g00441 CCT,ECH 171 400 Trihelix Transcription Factor Family AT1G26150 50.9 7.5e-68 255.8
Cpe13g01009 . 323 567 Trihelix Transcription Factor Family AT1G26150 52.0 2.2e-67 254.2
Cpe15g00892 . 1709 1938 Trihelix Transcription Factor Family AT1G26150 54.3 2.4e-66 250.8
Cpe09g00254 CCT,ECH 300 528 Trihelix Transcription Factor Family AT1G26150 51.1 1.1e-63 241.9
Cpe19g01075 . 682 913 Trihelix Transcription Factor Family AT1G26150 50.4 1.9e-63 241.1
Cpe19g00558 . 868 1096 Trihelix Transcription Factor Family AT1G26150 51.7 7.3e-63 239.2
Cpe14g00338 . 763 992 Trihelix Transcription Factor Family AT1G26150 50.9 6.8e-61 232.6
Cpe09g00257 . 24 145 Trihelix Transcription Factor Family AT1G26150 87.7 1.4e-58 224.9
Cpe16g00234 . 338 494 Trihelix Transcription Factor Family AT1G26150 63.1 1.3e-56 218.4
Cpe01g00667 . 149 432 Trihelix Transcription Factor Family AT1G23540 53.1 2.8e-76 283.5
Cpe05g01252 . 291 478 Trihelix Transcription Factor Family AT1G23540 65.4 1.3e-70 264.6
Cpe09g00505 . 289 520 Trihelix Transcription Factor Family AT1G23540 56.5 1.2e-66 251.5
Cpe04g01128 CCT,CST 230 390 Trihelix Transcription Factor Family AT1G23540 61.1 1.3e-57 221.5
Cpe13g01009 . 419 567 Trihelix Transcription Factor Family AT1G23540 62.4 1.4e-56 218.0
Cpe16g00234 . 334 495 Trihelix Transcription Factor Family AT1G23540 63.0 1.4e-56 218.0
Cpe18g00431 CCT,CST 329 487 Trihelix Transcription Factor Family AT1G23540 60.6 1.2e-55 214.9
Cpe16g00727 . 162 354 Trihelix Transcription Factor Family AT1G23540 52.1 8.2e-52 202.2
Cpe04g00123 CST 142 321 Trihelix Transcription Factor Family AT1G23540 53.3 1.1e-51 201.8
Cpe10g00441 CCT,ECH 160 350 Trihelix Transcription Factor Family AT1G23540 51.6 2.4e-51 200.7
Cpe08g00538 . 134 324 Trihelix Transcription Factor Family AT1G23540 51.0 3.1e-51 200.3
Cpe15g00537 CST 142 321 Trihelix Transcription Factor Family AT1G23540 53.9 3.1e-51 200.3
Cpe19g00628 CCT,ECH 163 353 Trihelix Transcription Factor Family AT1G23540 51.0 4.1e-51 199.9
Cpe01g01903 . 319 495 Trihelix Transcription Factor Family AT1G23540 53.1 1.3e-49 194.9
Cpe12g00619 . 423 604 Trihelix Transcription Factor Family AT1G23540 51.6 2.2e-49 194.1
Cpe17g00482 . 712 893 Trihelix Transcription Factor Family AT1G23540 53.3 2.2e-49 194.1
Cpe11g00144 . 159 349 Trihelix Transcription Factor Family AT1G23540 50.5 5.0e-49 193.0
Cpe09g00254 CCT,ECH 301 477 Trihelix Transcription Factor Family AT1G23540 54.7 6.5e-49 192.6
Cpe01g02453 CCT,ECH 294 468 Trihelix Transcription Factor Family AT1G23540 57.1 8.4e-49 192.2
Cpe15g00892 . 672 849 Trihelix Transcription Factor Family AT1G23540 52.2 8.4e-49 192.2
Cpe01g00002 . 717 895 Trihelix Transcription Factor Family AT1G23540 51.4 1.3e-46 184.9
Cpe14g00338 . 763 939 Trihelix Transcription Factor Family AT1G23540 52.5 2.3e-46 184.1
Cpe02g01703 . 2789 2965 Trihelix Transcription Factor Family AT1G23540 50.6 1.7e-41 167.9
Cpe11g00054 . 1 400 Trihelix Transcription Factor Family AT3G25990 63.1 1.5e-137 486.5
Cpe07g00047 . 4 306 Trihelix Transcription Factor Family AT3G25990 52.3 1.7e-96 350.1
Cpe02g00154 . 61 399 Trihelix Transcription Factor Family AT1G12040 59.3 5.1e-44 176.8
Cpe11g01106 CCT,CST 87 267 Trihelix Transcription Factor Family AT1G12040 64.6 1.6e-42 171.8
Cpe07g00999 CCT,CST 61 235 Trihelix Transcription Factor Family AT1G12040 65.7 3.4e-40 164.1
Cpe04g01144 . 46 220 Trihelix Transcription Factor Family AT1G12040 64.0 2.2e-39 161.4
Cpe18g00446 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 64.6 1.1e-38 159.1
Cpe03g00048 CCT 1 295 Trihelix Transcription Factor Family AT2G38250 59.4 8.6e-56 214.5
Cpe08g01227 CCT,CST 49 298 Trihelix Transcription Factor Family AT2G38250 62.9 6.1e-54 208.4
Cpe13g01009 . 327 676 Trihelix Transcription Factor Family AT5G38560 57.2 6.4e-118 422.2
Cpe01g00667 . 142 583 Trihelix Transcription Factor Family AT5G38560 50.8 8.6e-115 411.8
Cpe05g01252 . 301 647 Trihelix Transcription Factor Family AT5G38560 59.9 1.5e-114 411.0
Cpe04g01128 CCT,CST 219 560 Trihelix Transcription Factor Family AT5G38560 54.7 2.4e-104 377.1
Cpe18g00431 CCT,CST 310 657 Trihelix Transcription Factor Family AT5G38560 52.5 1.7e-102 370.9
Cpe09g00257 . 23 258 Trihelix Transcription Factor Family AT5G38560 67.4 1.7e-91 334.3
Cpe07g01010 CCT 288 523 Trihelix Transcription Factor Family AT5G38560 60.1 6.9e-80 295.8
Cpe17g00482 . 713 1009 Trihelix Transcription Factor Family AT5G38560 51.2 1.3e-78 291.6
Cpe15g00537 CST 141 365 Trihelix Transcription Factor Family AT5G38560 53.3 2.2e-65 247.7
Cpe05g01252 . 301 661 Trihelix Transcription Factor Family AT4G32710 58.5 4.1e-115 412.9
Cpe01g00667 . 201 561 Trihelix Transcription Factor Family AT4G32710 55.8 1.4e-107 387.9
Cpe04g01128 CCT,CST 223 572 Trihelix Transcription Factor Family AT4G32710 56.5 4.3e-104 376.3
Cpe18g00431 CCT,CST 339 667 Trihelix Transcription Factor Family AT4G32710 57.9 4.0e-102 369.8
Cpe07g01010 CCT 292 548 Trihelix Transcription Factor Family AT4G32710 58.1 2.3e-73 274.2
Cpe15g00537 CST 142 356 Trihelix Transcription Factor Family AT4G32710 56.0 2.6e-64 244.2
Cpe09g00257 . 3 209 Trihelix Transcription Factor Family AT4G32710 54.1 1.1e-62 238.8
Cpe16g00234 . 344 495 Trihelix Transcription Factor Family AT4G32710 67.8 5.2e-57 219.9
Cpe05g01252 . 291 631 Trihelix Transcription Factor Family AT1G70460 61.6 1.0e-118 424.9
Cpe01g00667 . 245 590 Trihelix Transcription Factor Family AT1G70460 62.6 2.3e-118 423.7
Cpe04g01128 CCT,CST 229 543 Trihelix Transcription Factor Family AT1G70460 59.3 4.8e-108 389.4
Cpe18g00431 CCT,CST 329 640 Trihelix Transcription Factor Family AT1G70460 59.8 1.2e-106 384.8
Cpe09g00505 . 289 635 Trihelix Transcription Factor Family AT1G70460 52.4 2.5e-101 367.1
Cpe07g01010 CCT 288 530 Trihelix Transcription Factor Family AT1G70460 63.0 1.7e-81 301.2
Cpe09g00257 . 3 255 Trihelix Transcription Factor Family AT1G70460 57.3 1.7e-81 301.2
Cpe16g00727 . 164 461 Trihelix Transcription Factor Family AT1G70460 50.2 3.9e-78 290.0
Cpe17g00482 . 712 998 Trihelix Transcription Factor Family AT1G70460 51.0 4.8e-76 283.1
Cpe15g00537 CST 142 365 Trihelix Transcription Factor Family AT1G70460 54.5 6.3e-68 256.1
Cpe02g00154 . 15 416 Trihelix Transcription Factor Family AT2G15880 62.2 8.2e-63 239.2
Cpe12g00384 . 30 391 Trihelix Transcription Factor Family AT2G15880 65.5 1.8e-54 211.5
Cpe17g00367 . 1077 1417 Trihelix Transcription Factor Family AT2G15880 62.6 1.4e-46 185.3
Cpe04g01144 . 27 398 Trihelix Transcription Factor Family AT2G15880 68.1 5.0e-44 176.8
Cpe11g01106 CCT,CST 75 451 Trihelix Transcription Factor Family AT2G15880 67.1 4.7e-42 170.2
Cpe18g00446 CCT 35 407 Trihelix Transcription Factor Family AT2G15880 68.1 1.1e-40 165.6
Cpe08g00278 CST 42 367 Trihelix Transcription Factor Family AT2G15880 68.2 1.0e-36 152.5
Cpe07g00999 CCT,CST 43 237 Trihelix Transcription Factor Family AT2G15880 68.0 1.3e-36 152.1
Cpe03g00245 CCT 134 435 Trihelix Transcription Factor Family AT5G03680 56.8 1.2e-80 298.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004167 0 5 1 2 1 1 2 0 1 1 1 1 2 1 1 2 1 4 2 1 1 2 1 1 0 1 1 2 1 3 43
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50186 PF13837 Myb_DNA-bind_4 4.20E-21 CL0123 Cpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe11g00054 Cpe_Chr11 FPKM 11.439037 14.871988 22.268881 21.878136 15.90769 18.672077 17.200817 45.87265 49.334377 47.902016