Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00076 ATGTTCTTCCTCGAGGATTTGTGGCAGATGCTCTGTGTTCAAGGTTTCCAGGATAAAGCTCGAGTTCTCTCCGGGTCTCTTATCCGGACCGTATCCGAATCCATGGGCAATTCGGATTGTGGCGTCTCGGAGTTAGAACTCTGTAGAGACGATTCGGCTGCGTTCCATTTCAAATTAATCGCCATCGCCTCCATTCTCACATCGGGAGTCATCGGAATCGCCATTCCATTGTTTGGCAGCCAGCGCCGGTTTCTCAAAACAGACGGAAATCTGTTCGTCGCGGCGAAGGCGTTTGCCGCCGGTGTAATTCTTGCCACCGCTTTTGTGCACATGCTTCCAGACGGATCGAATGCGCTCTCCGATCCGTGCTTGCCGAAATTCCCATGGTCGAAATTCCCCTTCTCGGGATTCTTCGCGATGATGGCGTCGCTGTTGACGCTCCTCGTCGATTTCGTCGGTACTCAGTACTACGAGCGAAAACAGGGGGTGATTCGATCGAAAGAGGAGGGTAACCGGGTCGGGTCGGTGGTAGATTCCGGGTTGGAATCGGGCATTCTTCCCGCCGGAGATTTGAACGTGAAAGTGTTCGGGGAAGAGGACGGCGGCGCGATGCACATCGTTGGAATGCATGCCCACGCCGGCCACCATCGTCACAGTCATCCGCAGGGGAAGGAGGCATGTGATGGGCACGTGAGAGTCCACGATCATGGCCATGCCCATGGAGGACATGGTCATTCTCATGGGCTTGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTATTTCCCAGATTTTGGAGCTTGGGATAGTGTCACATTCAGTGATAATTGGACTGTCTCTGGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCCCTGTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTGGGCGGCTGCATCTCTCAGGCTCAGTTCAACACCCTCTCCACCTCCCTCATGGCTGTCTTCTTTGCCATCACCACGCCCATCGGCATCGCCATAGGCACGGCTGTCGCCTCCACCTACAACCCCAACAGCACTGGGGCGTTGGTTGCGGAAGGGATTTTGGACTCTCTATCCGCGGGAATTCTGGTGTACATGGCTTTGGTTGATTTGATCGCGGCTGACTTTCTTAGCAAGAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCTTATTGTACTCTATTTCTCGGGGCGGGGCTGATGTCTTCACTCGCTCTCTGGGCTTGA 1251 53.8 MFFLEDLWQMLCVQGFQDKARVLSGSLIRTVSESMGNSDCGVSELELCRDDSAAFHFKLIAIASILTSGVIGIAIPLFGSQRRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSNALSDPCLPKFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGVIRSKEEGNRVGSVVDSGLESGILPAGDLNVKVFGEEDGGAMHIVGMHAHAGHHRHSHPQGKEACDGHVRVHDHGHAHGGHGHSHGLDGDDDESGVRHVVISQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPIGIAIGTAVASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 403673 406120 + Cp4.1LG11g00280.1 Cpe11g00076 476870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00076 416 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 416 - -
Cpe11g00076 416 PANTHER ZINC/IRON TRANSPORTER 35 416 - -
Cpe11g00076 416 Pfam ZIP Zinc transporter 56 413 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe11g00076 416 TIGRFAM zip: ZIP zinc/iron transport family 40 416 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cpe11g00076 416 MobiDBLite consensus disorder prediction 234 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00076 Cpe-Chr11:403673 Cpe09g00693 Cpe-Chr9:6137273 8.57E-31 dispersed
Cpe11g00076 Cpe-Chr11:403673 Cpe07g00560 Cpe-Chr7:3723601 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00076 K14709 - csv:101218224 707.983