Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00079 ATGTTGAAGCTATCATTCTCACCTGTCCGCATTTTCATCTTCCTCTTCGTCGTTTCTTTCTTCTTCTCTTCGCGGTTGCTTCCTTCCACCGCCCTTCCCCTCTCCGACTCGGATCAGCCGCTTCTTGCTAACGCTACTCTCCAGTCCAATAACGTATCCAGTCCGAGGAATAAGGAGGGTAGTTTTGCAGACATAATTGATCGTGCTTTGGAGAATGAGTTCAAGGACAATGACCAGAATGAAGAAATTGATTCAGGAAGCTTCAACAACAGCGTAGCAGAGAAGCAGGCAATTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAATGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGAAAGGATAATGTGTTTATCATATCTAACTTCAAGTCTAAATATCCAGTGCTACAACTAGACTTGAGATTGATCTCAGACTTGGTTATCGTAATTGTCTCTGCAACCTGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTAGCTCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGTTGGAATTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCTGTTCTTGGTGGCTTGCTCCAAATTTTCCTATTTATATGCCTCAGTGGGATCACAGCCTCGTCATGCGGTGGGAGTGCTTCTGAAGGAGTATTTGTTGGAGCATTCCTATCAATGTCCTCAACAGCAGTGGACTGTGCTGTTGGGTTATTGTTTGCTTTGCTTCCAGTATTGGGTGGGAATTCTGGTATTCTTAAAGGAGTGATGTCCATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTTTGGTTGTTTTGTCAATTTTATCCCGTACATGTGTTCCTTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGACCAATGAACTCTATCAATTAGCGTCAGTGGCGTTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACACACACTTGAACAAATAGAGCCTATAAGGAACCTTTTTGCGGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTGTGGAACCATGTTGATATATTACTAGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAAGGATTTGGATATAACAACAAGACATCAGTTTTGGTTGGAATGTCACTGGCTCAGATTGGAGAGTTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGGAAATTGTATCTACTGCTTATTGGGACCACAGCTCTCAGTCTGGTGACAACTCCTTTTCTTTTCAAGCTGATACCAGCTGTAGTGCATTTAGGCGTGCTATTGCGATGGTTCTCTCCAGATAGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGGGCAATGTTGATAGTCCAGGGACCTCATGATTCATGA 1683 42.13 MLKLSFSPVRIFIFLFVVSFFFSSRLLPSTALPLSDSDQPLLANATLQSNNVSSPRNKEGSFADIIDRALENEFKDNDQNEEIDSGSFNNSVAEKQAILETVARVKSKKNDTKEEKFQLQNVFNLDNDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFICLSGITASSCGGSASEGVFVGAFLSMSSTAVDCAVGLLFALLPVLGGNSGILKGVMSMSKVLVILVTFLVVLSILSRTCVPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNKTSVLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPFLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRAMLIVQGPHDS 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 415107 424001 + Cp4.1LG11g00130.1 Cpe11g00079 476873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00079 560 PANTHER K(+) EFFLUX ANTIPORTER 6 288 560 - -
Cpe11g00079 560 PANTHER K(+) EFFLUX ANTIPORTER 6 13 287 - -
Cpe11g00079 560 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 13 287 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cpe11g00079 560 Pfam Sodium/hydrogen exchanger family 288 511 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe11g00079 560 Pfam Sodium/hydrogen exchanger family 168 287 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe11g00079 560 Gene3D - 290 518 IPR038770 -
Cpe11g00079 560 Gene3D - 161 289 IPR038770 -
Cpe11g00079 560 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 288 560 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00079 Cpe-Chr11:415107 Cpe18g00364 Cpe-Chr18:5017491 0 dispersed
Cpe11g00079 Cpe-Chr11:415107 Cpe07g00557 Cpe-Chr7:3691795 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00079 - - csv:101217282 938.332