Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00092 | ATGATTAACGAATCAATGTTTCTCAATCTCACGCCTCACATTTCATCCTGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCATCCTATTTCACCGCGGGCAACGTGTCGCCGCTCGATTCGCCGACGGCGGCGGTTATGGACTACGATTCATCTCTCTGGGAGGATCAAGACTTGCCGGCCATTGTGGACGCCTTCACGTGCGACCATTTCCGGATGTACGAGTTCAAAGTCCGCGCGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCCTACGCCCACGCCGGCGAAAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAACTATTCCGGCACCGAGTGTCCGGATTTACGTCATGGGTGTTGTATGAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAATTTGGCTCCACCCTGATCGGTACCGGACTCAGCCGTGCCGTGACGGAGCAGGCTGCCGAAGGCGGGTCTGTTTCTTCGCTCACTCGTCGGAGCAACTCCGAATCCCAGGGAAACAGAGCATCAGGTCTCCCCGAGGCAGGGAAATCACCGCCTCTGCCGTATCATCTCCGACGTCCATCCTAATATCATCATCGTCAGACTCGCCGCCTATGTCTCCGATCAGCCCTTTAACCACCGGTGGGGAATCATTCAGTAGATTAGTCGCATTGATGCACAATCTCCACTTCGATGAATTAAAAACGAATCCGGGGATCTCCGGCTTCGGTCCAAATTTCCGACGAAACTCCGGCGCATTTGATTCATGGGACAGAGATAACGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTGATGAGAGAGAACTCGGTGGAGCGTGTCCGGCCGCTGATATTGGCCGGATCTCGGAACTAA | 921 | 54.83 | MINESMFLNLTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLPAIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLRHGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIRSPRGREITASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTNPGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLILAGSRN | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 489610 | 490530 | - | Cp4.1LG11g00010.1 | Cpe11g00092 | 476886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00092 | 306 | PANTHER | UNKEMPT FAMILY MEMBER | 251 | 299 | IPR045234 | - | |
Cpe11g00092 | 306 | PANTHER | UNKEMPT FAMILY MEMBER | 21 | 241 | IPR045234 | - | |
Cpe11g00092 | 306 | Gene3D | - | 107 | 177 | - | - | |
Cpe11g00092 | 306 | ProSiteProfiles | Zinc finger C3H1-type profile. | 110 | 137 | IPR000571 | GO:0046872 | |
Cpe11g00092 | 306 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 | 21 | 241 | - | - | |
Cpe11g00092 | 306 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 | 251 | 299 | - | - | |
Cpe11g00092 | 306 | MobiDBLite | consensus disorder prediction | 178 | 213 | - | - | |
Cpe11g00092 | 306 | SMART | c3hfinal6 | 145 | 168 | IPR000571 | GO:0046872 | |
Cpe11g00092 | 306 | SMART | c3hfinal6 | 110 | 136 | IPR000571 | GO:0046872 | |
Cpe11g00092 | 306 | MobiDBLite | consensus disorder prediction | 183 | 213 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe06g00230 | Cpe11g00092 | CCT | |
Cpe07g00542 | Cpe11g00092 | CCT | |
Cpe06g00230 | Cpe11g00092 | ECH | |
Cpe07g00542 | Cpe11g00092 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00092 | Cpe-Chr11:489610 | Cpe18g00382 | Cpe-Chr18:5117200 | 2.95E-77 | dispersed | |
Cpe11g00092 | Cpe-Chr11:489610 | Cpe02g00246 | Cpe-Chr2:1280451 | 5.26E-14 | wgd | |
Cpe11g00092 | Cpe-Chr11:489610 | Cpe06g00230 | Cpe-Chr6:1226770 | 3.22E-85 | wgd | |
Cpe11g00092 | Cpe-Chr11:489610 | Cpe07g00542 | Cpe-Chr7:3599148 | 3.23E-175 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00092 | - | - | csv:101214248 | 513.457 |