Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00118 ATGTTCAAAACTAATGGGTTTGTGGGGCTCTCTGTTTTCTTCAAAGCTAGATTACTCATTACGCCCATTCGATTCAATCTGACAGGTGGAATATCACGTGCTGTTCATCCTCTGGCTGGTGTTTTCTGCTCCACTGTTTGGAAGGCACTTGGAATTAAACTAATAGTGAATTTCATCGCATTATTAGCAAAGACCATTCTGGAAAAGATGCTGTGCGCTTGTTCAGGAGAGCAATTCAAGTTCGAAGAGCCACCACAGTCCCCGGAGTCACTAGCGACGAGGGATTTCTCGGCCAGTTGTCTTTCCTCGAGAACTGGAGACTGGGATTTGAAATTTGAAGATTCTCAAGTAGATGAAGTTGAATCCACTTTAAAAGAAGCCCTCTCATTAAACTACGAGGAAGCCAGAGCTTTACTGGGGAGGCTTGAATATCAAAGAGGAAATTTTGATGCTGCCCTACAGGTATTTCAAGGTATAGACATTAGATCCTTGACGCCAAGAATGGTTAAGGCAATCACCGAAAAGATAAGAGAGGAAAAACCTCGTCCTAAAGGTGACAGTGCCCCCCCTACTGGTGTACTGTCCATGCATTCTGTTAGCCTACTACTTGAAGCAATTTTACTCAAGGCAAAATCACTGGAGGAACTTGGCAGATATATAGAGTCTGCGAAAGAATGCAGGATAATTCTTGATACAGTGGAATCAGCTCTGCCTAATGGAATGCCCGAGTTTATTGGCGAAGACTGCAAATTTCAGGAAATGTTACACAAAGCTTTGGAATTACTGCCTACTTTGTGGATTAAGGGTGGTTATCTCGACGAGGCCATAAACGCCTACCGCCGAGTCCTTGTTAAACCATGGAATCTAGATCCAAACAAGTTGGCTGCCATAGAGAAAGAATTGGCTGGCACATTACTCTACGGAGGTGTTGAAGCAAGCCTTCCCCTTAAGTTTTATGTATTCGGTCCAAGAACACCTAAAAACAATGTAGAAGAAGCAATCCTTTTGTTGCTAATACTCATGAGGAAAGTGGTGACGCAGGAAATAAACTGGGATCCAGAGATTATGAATCATCTGACTTTTGCACTTTCTATCACAAGACAGTTTAAATTACTGGCTGAGCACGTGGAGCAGATTCTTCCTGGAATATATAGTCGAGCTGAGAGGTGGTACTTTCTTGCTCTATGTTACAATGCGGCAGGACAGAATGAAACAGCTTTGAACCTTCTAATGAAGGTTTGCGGTTCCTCTGAAGTAAAGCAGAAGCCCCATTTTCATTCATTTTTGTTGCTTGCAAAATTGTGTTCAGAGGATACAAAATATGCACGTGATGGAATAAAATGTGCTAGTAGAATGATCGATATGGCCAGTGAACACAGTAAACATTTCAATGCTGAATCCCACAAATTTTTAGGTGTTTGCTATGGGAATGCAGCCAGAGCTTCTGTATCAGACTCTGAAAGAACTCTTTTCCAAAAAGAATCATTGAACTCCCTAAGAGTTTCTTCTCTCGGTAGGAGGCATGATCCAGAAGTAATGTTCAACATTAGCTTGGAAAATGCTGTGCAGAGAAATCTTGATGTTGCTTTCTACAGTGCAATGGCGTACTCAAATATGGTGGCTGATGGTTCCGGAAGAGGTTGGAAGCTTTTGACCCTCATACTTTCAGCTGAGAGGCGACTCAAGGACGCTGAAACCATAGTTGATTTTGCTTTGGACGAAGCTGAGAGGATGGATCAATTGGAATTTCTTCGATTGAAAGCTGTCCTCAAAATTGCTCAGGAACAGCCAAAGCAAGCAATAGAAACCTACAGAATCTTGCTAGCACTAATTCAAGCACGAGATGAACTTCAGCTTCAGGCTACGAACCTTAACCAATCCAAGGACTTGGAACTAGAGGCAGCGGCAGAACGTGACTTAGAACGGGCAGCCTGGCAGGATTTGGCTGCCATATATTCAAAACTTGCTTCCTGGGCGGATGCAGAAATTTGCCTGAACAAAGCCAAAACATTAAATGTTCATTGCCCCAGAGGTTGGCATACAACAGGCAAGTATTTTGAGGCTCGATCGTTACACAAGGAAGCACTTGTTTCATACTCTGTCTCTCTATCGGTTGATCCTGATTATATTCCGAGTATCATCTCAACAGCAGAAGTATTGATGAAATGCGGTAACCAATCACTTCCAATTGCACGCAGCTTGTTGATGAATGCTGTAAGATTGGATCCTACAAGCCATGAAGCATGGTTCAACCTTGGAGTGCTCTCCAAAATGGAAGGTTTGTTGCTTCAAGCTGCAGATTTTTTTCAAGCCGCACATGAACTCCAATTATCAGCTCCTCCTCAGAGTTTCATCTAA 2358 42.79 MFKTNGFVGLSVFFKARLLITPIRFNLTGGISRAVHPLAGVFCSTVWKALGIKLIVNFIALLAKTILEKMLCACSGEQFKFEEPPQSPESLATRDFSASCLSSRTGDWDLKFEDSQVDEVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRSLTPRMVKAITEKIREEKPRPKGDSAPPTGVLSMHSVSLLLEAILLKAKSLEELGRYIESAKECRIILDTVESALPNGMPEFIGEDCKFQEMLHKALELLPTLWIKGGYLDEAINAYRRVLVKPWNLDPNKLAAIEKELAGTLLYGGVEASLPLKFYVFGPRTPKNNVEEAILLLLILMRKVVTQEINWDPEIMNHLTFALSITRQFKLLAEHVEQILPGIYSRAERWYFLALCYNAAGQNETALNLLMKVCGSSEVKQKPHFHSFLLLAKLCSEDTKYARDGIKCASRMIDMASEHSKHFNAESHKFLGVCYGNAARASVSDSERTLFQKESLNSLRVSSLGRRHDPEVMFNISLENAVQRNLDVAFYSAMAYSNMVADGSGRGWKLLTLILSAERRLKDAETIVDFALDEAERMDQLEFLRLKAVLKIAQEQPKQAIETYRILLALIQARDELQLQATNLNQSKDLELEAAAERDLERAAWQDLAAIYSKLASWADAEICLNKAKTLNVHCPRGWHTTGKYFEARSLHKEALVSYSVSLSVDPDYIPSIISTAEVLMKCGNQSLPIARSLLMNAVRLDPTSHEAWFNLGVLSKMEGLLLQAADFFQAAHELQLSAPPQSFI 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 649898 654752 - Cp4.1LG11g01230.1 Cpe11g00118 476912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00118 785 Gene3D Tetratricopeptide repeat domain 617 783 IPR011990 GO:0005515
Cpe11g00118 785 SMART tpr_5 581 614 IPR019734 GO:0005515
Cpe11g00118 785 SMART tpr_5 642 675 IPR019734 GO:0005515
Cpe11g00118 785 SMART tpr_5 387 420 IPR019734 GO:0005515
Cpe11g00118 785 SMART tpr_5 676 709 IPR019734 GO:0005515
Cpe11g00118 785 SMART tpr_5 746 779 IPR019734 GO:0005515
Cpe11g00118 785 SUPERFAMILY TPR-like 377 616 IPR011990 GO:0005515
Cpe11g00118 785 Coils Coil 554 574 - -
Cpe11g00118 785 Gene3D Tetratricopeptide repeat domain 86 309 IPR011990 GO:0005515
Cpe11g00118 785 SUPERFAMILY TPR-like 581 776 IPR011990 GO:0005515
Cpe11g00118 785 PANTHER PROTEIN NPGR1 70 784 - -
Cpe11g00118 785 Gene3D Tetratricopeptide repeat domain 325 610 IPR011990 GO:0005515
Cpe11g00118 785 PANTHER PROTEIN NPG1 70 784 IPR043376 -
Cpe11g00118 785 Coils Coil 125 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00348 Cpe-Chr8:2168722 Cpe11g00118 Cpe-Chr11:649898 0 dispersed
Cpe11g00118 Cpe-Chr11:649898 Cpe15g00093 Cpe-Chr15:703413 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00118 K21843 - csv:101209448 1291.95