Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00124 ATGGAGGCTTTGGGAGGCTTTTCTGATGGGGAATGGGAGTCTTTCGCCGCCATGTTCTCATTGGAGGAGGTAGATCAGTCCCATATTCCGATCGCGAATCATGCCGATCCTTCCACTGAGCTTCAATTGCCCAACAATGGCGGCAGCAGCTGGTTCTATTCATTGGACGCTTTTGTTCCCAATTTGCAGAGTTATTGCGTCAAACAGGACACGAGGAGCTGCAGTAGCTGCATTACTACTGATGATTCCCATGCTGCCTTTTTGTTTCCCAATTCTACTGATTTCTTTACGCCAATTGACGAGAGGAATTTTGGGTCCTCGTGTTTTTCTGATGTTTTAATCGAGGAAGTGGATAAGGCTCTCGACACCGCCGCCACCGGTGAAGACTCCAGCGCTGAGAGATTCGTCGAAATTAATGTAGTACAAGGTACCTACCCAGCACTGCCGCCGCCATCGCAACTCGTAGATTCCACTGGTGCCGCGAAGGAACCAATGGCACTGAAAAGGAAAGTCAATAACGAAGATATTTCTGATAATCAGAAGAAGAAAACTCGGGTTTCAGCAGATGGGCAGAAGAAGAAGAAAACAGAGGAAAGAAAGAAAAATGAGAAGAGAAAAGGGAAGAGTGTGGAAGAAGAAGGCAATGCGGGGGGAGCATCAGAAGGGCAGTGCTCCATTAGTTACAGTTCCGATCAGGAAGAAAATGGTTCACAGGAGGGCCAAGGCGCCACCTCCGACGGCGGCTTGACCAGGAAGGGCAGAGCAAGCAGAGGGTCGGCCACAGATCCCCAAAGCCTCTACGCTAGAAAACGAAGGGAGAGAATCAACGAGCGATTAAGAATGTTACAGAAACTTGTTCCCAATGGAACCAAGGTTGATATCAGTACCATGCTTGAAGAAGCTGTTCATTACGTCAAGTTTTTGCAGCTCCAAATCAAGTTATTGAGCTCAGATGAGCTGTGGATGTTTGCTCCTTTGGCATACAATGGATTGGACCTTGGGCTTCACCAGAAGCTCTCTCCATTCGGATCACATTGA 1038 48.07 MEALGGFSDGEWESFAAMFSLEEVDQSHIPIANHADPSTELQLPNNGGSSWFYSLDAFVPNLQSYCVKQDTRSCSSCITTDDSHAAFLFPNSTDFFTPIDERNFGSSCFSDVLIEEVDKALDTAATGEDSSAERFVEINVVQGTYPALPPPSQLVDSTGAAKEPMALKRKVNNEDISDNQKKKTRVSADGQKKKKTEERKKNEKRKGKSVEEEGNAGGASEGQCSISYSSDQEENGSQEGQGATSDGGLTRKGRASRGSATDPQSLYARKRRERINERLRMLQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMFAPLAYNGLDLGLHQKLSPFGSH 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 681069 682446 - Cp4.1LG11g01150.1 Cpe11g00124 476918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00124 345 MobiDBLite consensus disorder prediction 164 272 - -
Cpe11g00124 345 CDD bHLH_AtIND_like 260 322 - -
Cpe11g00124 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 259 320 IPR036638 GO:0046983
Cpe11g00124 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 259 308 IPR011598 GO:0046983
Cpe11g00124 345 MobiDBLite consensus disorder prediction 167 212 - -
Cpe11g00124 345 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 342 - -
Cpe11g00124 345 MobiDBLite consensus disorder prediction 220 245 - -
Cpe11g00124 345 Coils Coil 193 213 - -
Cpe11g00124 345 Pfam Helix-loop-helix DNA-binding domain 269 309 IPR011598 GO:0046983
Cpe11g00124 345 PANTHER TRANSCRIPTION FACTOR BHLH84-LIKE 5 342 - -
Cpe11g00124 345 SMART finulus 265 314 IPR011598 GO:0046983
Cpe11g00124 345 Gene3D - 261 322 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00514 Cpe11g00124 CCT
Cpe06g00195 Cpe11g00124 CCT
Cpe06g00195 Cpe11g00124 ECH
Cpe07g00514 Cpe11g00124 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00124 Cpe-Chr11:681069 Cpe15g00442 Cpe-Chr15:5543153 1.14E-39 dispersed
Cpe13g00560 Cpe-Chr13:5598091 Cpe11g00124 Cpe-Chr11:681069 1.27E-18 dispersed
Cpe01g00404 Cpe-Chr1:2341237 Cpe11g00124 Cpe-Chr11:681069 2.08E-52 wgd
Cpe11g00124 Cpe-Chr11:681069 Cpe14g00269 Cpe-Chr14:1556221 8.66E-53 wgd
Cpe11g00124 Cpe-Chr11:681069 Cpe15g00441 Cpe-Chr15:5540508 1.29E-16 wgd
Cpe11g00124 Cpe-Chr11:681069 Cpe04g00326 Cpe-Chr4:4005182 2.22E-46 wgd
Cpe11g00124 Cpe-Chr11:681069 Cpe06g00195 Cpe-Chr6:1046524 3.63E-70 wgd
Cpe11g00124 Cpe-Chr11:681069 Cpe07g00514 Cpe-Chr7:3391186 3.58E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50195 PF00010 HLH 1.60E-08 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00124 - - cmax:111491997 639.802