Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00124 | ATGGAGGCTTTGGGAGGCTTTTCTGATGGGGAATGGGAGTCTTTCGCCGCCATGTTCTCATTGGAGGAGGTAGATCAGTCCCATATTCCGATCGCGAATCATGCCGATCCTTCCACTGAGCTTCAATTGCCCAACAATGGCGGCAGCAGCTGGTTCTATTCATTGGACGCTTTTGTTCCCAATTTGCAGAGTTATTGCGTCAAACAGGACACGAGGAGCTGCAGTAGCTGCATTACTACTGATGATTCCCATGCTGCCTTTTTGTTTCCCAATTCTACTGATTTCTTTACGCCAATTGACGAGAGGAATTTTGGGTCCTCGTGTTTTTCTGATGTTTTAATCGAGGAAGTGGATAAGGCTCTCGACACCGCCGCCACCGGTGAAGACTCCAGCGCTGAGAGATTCGTCGAAATTAATGTAGTACAAGGTACCTACCCAGCACTGCCGCCGCCATCGCAACTCGTAGATTCCACTGGTGCCGCGAAGGAACCAATGGCACTGAAAAGGAAAGTCAATAACGAAGATATTTCTGATAATCAGAAGAAGAAAACTCGGGTTTCAGCAGATGGGCAGAAGAAGAAGAAAACAGAGGAAAGAAAGAAAAATGAGAAGAGAAAAGGGAAGAGTGTGGAAGAAGAAGGCAATGCGGGGGGAGCATCAGAAGGGCAGTGCTCCATTAGTTACAGTTCCGATCAGGAAGAAAATGGTTCACAGGAGGGCCAAGGCGCCACCTCCGACGGCGGCTTGACCAGGAAGGGCAGAGCAAGCAGAGGGTCGGCCACAGATCCCCAAAGCCTCTACGCTAGAAAACGAAGGGAGAGAATCAACGAGCGATTAAGAATGTTACAGAAACTTGTTCCCAATGGAACCAAGGTTGATATCAGTACCATGCTTGAAGAAGCTGTTCATTACGTCAAGTTTTTGCAGCTCCAAATCAAGTTATTGAGCTCAGATGAGCTGTGGATGTTTGCTCCTTTGGCATACAATGGATTGGACCTTGGGCTTCACCAGAAGCTCTCTCCATTCGGATCACATTGA | 1038 | 48.07 | MEALGGFSDGEWESFAAMFSLEEVDQSHIPIANHADPSTELQLPNNGGSSWFYSLDAFVPNLQSYCVKQDTRSCSSCITTDDSHAAFLFPNSTDFFTPIDERNFGSSCFSDVLIEEVDKALDTAATGEDSSAERFVEINVVQGTYPALPPPSQLVDSTGAAKEPMALKRKVNNEDISDNQKKKTRVSADGQKKKKTEERKKNEKRKGKSVEEEGNAGGASEGQCSISYSSDQEENGSQEGQGATSDGGLTRKGRASRGSATDPQSLYARKRRERINERLRMLQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDELWMFAPLAYNGLDLGLHQKLSPFGSH | 345 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 681069 | 682446 | - | Cp4.1LG11g01150.1 | Cpe11g00124 | 476918 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00124 | 345 | MobiDBLite | consensus disorder prediction | 164 | 272 | - | - | |
Cpe11g00124 | 345 | CDD | bHLH_AtIND_like | 260 | 322 | - | - | |
Cpe11g00124 | 345 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 259 | 320 | IPR036638 | GO:0046983 | |
Cpe11g00124 | 345 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 259 | 308 | IPR011598 | GO:0046983 | |
Cpe11g00124 | 345 | MobiDBLite | consensus disorder prediction | 167 | 212 | - | - | |
Cpe11g00124 | 345 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 5 | 342 | - | - | |
Cpe11g00124 | 345 | MobiDBLite | consensus disorder prediction | 220 | 245 | - | - | |
Cpe11g00124 | 345 | Coils | Coil | 193 | 213 | - | - | |
Cpe11g00124 | 345 | Pfam | Helix-loop-helix DNA-binding domain | 269 | 309 | IPR011598 | GO:0046983 | |
Cpe11g00124 | 345 | PANTHER | TRANSCRIPTION FACTOR BHLH84-LIKE | 5 | 342 | - | - | |
Cpe11g00124 | 345 | SMART | finulus | 265 | 314 | IPR011598 | GO:0046983 | |
Cpe11g00124 | 345 | Gene3D | - | 261 | 322 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00514 | Cpe11g00124 | CCT | |
Cpe06g00195 | Cpe11g00124 | CCT | |
Cpe06g00195 | Cpe11g00124 | ECH | |
Cpe07g00514 | Cpe11g00124 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00124 | Cpe-Chr11:681069 | Cpe15g00442 | Cpe-Chr15:5543153 | 1.14E-39 | dispersed | |
Cpe13g00560 | Cpe-Chr13:5598091 | Cpe11g00124 | Cpe-Chr11:681069 | 1.27E-18 | dispersed | |
Cpe01g00404 | Cpe-Chr1:2341237 | Cpe11g00124 | Cpe-Chr11:681069 | 2.08E-52 | wgd | |
Cpe11g00124 | Cpe-Chr11:681069 | Cpe14g00269 | Cpe-Chr14:1556221 | 8.66E-53 | wgd | |
Cpe11g00124 | Cpe-Chr11:681069 | Cpe15g00441 | Cpe-Chr15:5540508 | 1.29E-16 | wgd | |
Cpe11g00124 | Cpe-Chr11:681069 | Cpe04g00326 | Cpe-Chr4:4005182 | 2.22E-46 | wgd | |
Cpe11g00124 | Cpe-Chr11:681069 | Cpe06g00195 | Cpe-Chr6:1046524 | 3.63E-70 | wgd | |
Cpe11g00124 | Cpe-Chr11:681069 | Cpe07g00514 | Cpe-Chr7:3391186 | 3.58E-31 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50195 | PF00010 | HLH | 1.60E-08 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00124 | - | - | cmax:111491997 | 639.802 |