Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00133 | ATGGCCGAGTTAGGGAACTGTGTCCGTATCACTCGTGCTTCCTCAAAGAGAGTTGCGGCATCCGCCATGTCCGATGACCAATCCACGAATAAAAAGCGGGTGGTTCTCGGTGAGCTTCCCAACATTCAGAATGCTACTGGATCAGCGGCACAGAAGAGGAAGGCCACGTCCCAGATCACAAAATGCAAGCCTAAGAAGAGAACTAAGATCGCTGCTGCTCCAATGAGCAAGACGACTGTGGTTGTGGAAGATAATGATCCCAAGTTGACCGTTGATGATATTTTGGACGACCCAGAAATGAAGGGGCCTTATTCCTCCGATATTTATGCTTATCTTCGCAAAATGGAGGCGGAACCAATAAGAAGGCCGATACCAAATTACTTAGAGAAGGTTCAGACGGACATAAGTGCTAATATGAGAGGGGTCTTGGTTGATTGGATGGTTGAGGTTGCCGAGGAGTACAAGCTCGGCTCCGATACTCTGTATCTATCCATCTCTTACATCGACAGGTTCCTATCAATGAACATAATCAATAGGCAAAGGCTTCAATTGCTGGGGGTTTCTTCAATGCTCATTGCCTCGAAATATGAAGAGATCACCCCTCCACATGTGGAAGATTTCTGCTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAGATGGAGGCTGATATACTCAAATCTTTGAACTTTGAAATGGGAAATCCTACTGCCAAGACATTCTTAAGGCAAATACCAAATCTGCATTTGGAATTTCTGGGTCATTACCTTGCTGAGCTAAGCTTATTGGACTATAATTTTGTGAAGTTCTTGCCTTCTTTGATTGCTGCTTCAGTCGTATTTCTTGCAAAATTCATCATCCGGCCAAAGCAGCATCCTTGGGGTCCGAACTTGCAACAATACACAGGCTACAGGCCAGCTGATCTAAGGCCATGTGTGCTTCTATTACACGATTTGTATATGGCAAGAAGAGGGGGATCTCTGATAGCTGTGAGAGAAAAATACAAGCAACAAAGGTTCAAGAGTGTGGCAATGATGCCTTCACCCCCTGAGATACCGTCTGCCTATTTCGAAGAAGCTTAA | 1089 | 44.72 | MAELGNCVRITRASSKRVAASAMSDDQSTNKKRVVLGELPNIQNATGSAAQKRKATSQITKCKPKKRTKIAAAPMSKTTVVVEDNDPKLTVDDILDDPEMKGPYSSDIYAYLRKMEAEPIRRPIPNYLEKVQTDISANMRGVLVDWMVEVAEEYKLGSDTLYLSISYIDRFLSMNIINRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRQIPNLHLEFLGHYLAELSLLDYNFVKFLPSLIAASVVFLAKFIIRPKQHPWGPNLQQYTGYRPADLRPCVLLLHDLYMARRGGSLIAVREKYKQQRFKSVAMMPSPPEIPSAYFEEA | 362 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 725289 | 727486 | + | Cp4.1LG11g01350.1 | Cpe11g00133 | 476927 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00133 | 362 | CDD | CYCLIN | 139 | 228 | IPR013763 | - | |
Cpe11g00133 | 362 | SMART | cyclin_7 | 242 | 320 | IPR013763 | - | |
Cpe11g00133 | 362 | SMART | cyclin_7 | 145 | 229 | IPR013763 | - | |
Cpe11g00133 | 362 | CDD | CYCLIN | 238 | 319 | IPR013763 | - | |
Cpe11g00133 | 362 | Pfam | Cyclin, N-terminal domain | 107 | 235 | IPR006671 | - | |
Cpe11g00133 | 362 | Gene3D | - | 107 | 347 | - | - | |
Cpe11g00133 | 362 | PANTHER | CYCLIN-A3-1-RELATED | 24 | 361 | - | - | |
Cpe11g00133 | 362 | ProSitePatterns | Cyclins signature. | 140 | 171 | IPR006671 | - | |
Cpe11g00133 | 362 | Gene3D | - | 123 | 236 | - | - | |
Cpe11g00133 | 362 | SUPERFAMILY | Cyclin-like | 96 | 235 | IPR036915 | - | |
Cpe11g00133 | 362 | SUPERFAMILY | Cyclin-like | 238 | 353 | IPR036915 | - | |
Cpe11g00133 | 362 | SMART | Cyclin_C_2 | 238 | 351 | IPR004367 | - | |
Cpe11g00133 | 362 | PIRSF | Cyclin_A_B_D_E | 6 | 358 | IPR039361 | - | |
Cpe11g00133 | 362 | PANTHER | CYCLINS | 24 | 361 | IPR039361 | - | |
Cpe11g00133 | 362 | MobiDBLite | consensus disorder prediction | 46 | 65 | - | - | |
Cpe11g00133 | 362 | Pfam | Cyclin, C-terminal domain | 239 | 351 | IPR004367 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00503 | Cpe11g00133 | CCT | |
Cpe06g00185 | Cpe11g00133 | CCT | |
Cpe07g00503 | Cpe11g00133 | ECH | |
Cpe06g00185 | Cpe11g00133 | ECH | |
Cpe02g00206 | Cpe11g00133 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00133 | Cpe-Chr11:725289 | Cpe13g00635 | Cpe-Chr13:6074518 | 1.16E-99 | dispersed | |
Cpe11g00133 | Cpe-Chr11:725289 | Cpe15g00455 | Cpe-Chr15:5624271 | 8.72E-89 | wgd | |
Cpe11g00133 | Cpe-Chr11:725289 | Cpe02g00206 | Cpe-Chr2:1058884 | 1.01E-160 | wgd | |
Cpe11g00133 | Cpe-Chr11:725289 | Cpe04g00309 | Cpe-Chr4:3874502 | 3.83E-96 | wgd | |
Cpe11g00133 | Cpe-Chr11:725289 | Cpe06g00185 | Cpe-Chr6:995417 | 3.78E-160 | wgd | |
Cpe11g00133 | Cpe-Chr11:725289 | Cpe07g00503 | Cpe-Chr7:3300135 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00133 | K06627 | - | csv:101206145 | 617.846 |