Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00133 ATGGCCGAGTTAGGGAACTGTGTCCGTATCACTCGTGCTTCCTCAAAGAGAGTTGCGGCATCCGCCATGTCCGATGACCAATCCACGAATAAAAAGCGGGTGGTTCTCGGTGAGCTTCCCAACATTCAGAATGCTACTGGATCAGCGGCACAGAAGAGGAAGGCCACGTCCCAGATCACAAAATGCAAGCCTAAGAAGAGAACTAAGATCGCTGCTGCTCCAATGAGCAAGACGACTGTGGTTGTGGAAGATAATGATCCCAAGTTGACCGTTGATGATATTTTGGACGACCCAGAAATGAAGGGGCCTTATTCCTCCGATATTTATGCTTATCTTCGCAAAATGGAGGCGGAACCAATAAGAAGGCCGATACCAAATTACTTAGAGAAGGTTCAGACGGACATAAGTGCTAATATGAGAGGGGTCTTGGTTGATTGGATGGTTGAGGTTGCCGAGGAGTACAAGCTCGGCTCCGATACTCTGTATCTATCCATCTCTTACATCGACAGGTTCCTATCAATGAACATAATCAATAGGCAAAGGCTTCAATTGCTGGGGGTTTCTTCAATGCTCATTGCCTCGAAATATGAAGAGATCACCCCTCCACATGTGGAAGATTTCTGCTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAGATGGAGGCTGATATACTCAAATCTTTGAACTTTGAAATGGGAAATCCTACTGCCAAGACATTCTTAAGGCAAATACCAAATCTGCATTTGGAATTTCTGGGTCATTACCTTGCTGAGCTAAGCTTATTGGACTATAATTTTGTGAAGTTCTTGCCTTCTTTGATTGCTGCTTCAGTCGTATTTCTTGCAAAATTCATCATCCGGCCAAAGCAGCATCCTTGGGGTCCGAACTTGCAACAATACACAGGCTACAGGCCAGCTGATCTAAGGCCATGTGTGCTTCTATTACACGATTTGTATATGGCAAGAAGAGGGGGATCTCTGATAGCTGTGAGAGAAAAATACAAGCAACAAAGGTTCAAGAGTGTGGCAATGATGCCTTCACCCCCTGAGATACCGTCTGCCTATTTCGAAGAAGCTTAA 1089 44.72 MAELGNCVRITRASSKRVAASAMSDDQSTNKKRVVLGELPNIQNATGSAAQKRKATSQITKCKPKKRTKIAAAPMSKTTVVVEDNDPKLTVDDILDDPEMKGPYSSDIYAYLRKMEAEPIRRPIPNYLEKVQTDISANMRGVLVDWMVEVAEEYKLGSDTLYLSISYIDRFLSMNIINRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRQIPNLHLEFLGHYLAELSLLDYNFVKFLPSLIAASVVFLAKFIIRPKQHPWGPNLQQYTGYRPADLRPCVLLLHDLYMARRGGSLIAVREKYKQQRFKSVAMMPSPPEIPSAYFEEA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 725289 727486 + Cp4.1LG11g01350.1 Cpe11g00133 476927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00133 362 CDD CYCLIN 139 228 IPR013763 -
Cpe11g00133 362 SMART cyclin_7 242 320 IPR013763 -
Cpe11g00133 362 SMART cyclin_7 145 229 IPR013763 -
Cpe11g00133 362 CDD CYCLIN 238 319 IPR013763 -
Cpe11g00133 362 Pfam Cyclin, N-terminal domain 107 235 IPR006671 -
Cpe11g00133 362 Gene3D - 107 347 - -
Cpe11g00133 362 PANTHER CYCLIN-A3-1-RELATED 24 361 - -
Cpe11g00133 362 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Cpe11g00133 362 Gene3D - 123 236 - -
Cpe11g00133 362 SUPERFAMILY Cyclin-like 96 235 IPR036915 -
Cpe11g00133 362 SUPERFAMILY Cyclin-like 238 353 IPR036915 -
Cpe11g00133 362 SMART Cyclin_C_2 238 351 IPR004367 -
Cpe11g00133 362 PIRSF Cyclin_A_B_D_E 6 358 IPR039361 -
Cpe11g00133 362 PANTHER CYCLINS 24 361 IPR039361 -
Cpe11g00133 362 MobiDBLite consensus disorder prediction 46 65 - -
Cpe11g00133 362 Pfam Cyclin, C-terminal domain 239 351 IPR004367 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00503 Cpe11g00133 CCT
Cpe06g00185 Cpe11g00133 CCT
Cpe07g00503 Cpe11g00133 ECH
Cpe06g00185 Cpe11g00133 ECH
Cpe02g00206 Cpe11g00133 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00133 Cpe-Chr11:725289 Cpe13g00635 Cpe-Chr13:6074518 1.16E-99 dispersed
Cpe11g00133 Cpe-Chr11:725289 Cpe15g00455 Cpe-Chr15:5624271 8.72E-89 wgd
Cpe11g00133 Cpe-Chr11:725289 Cpe02g00206 Cpe-Chr2:1058884 1.01E-160 wgd
Cpe11g00133 Cpe-Chr11:725289 Cpe04g00309 Cpe-Chr4:3874502 3.83E-96 wgd
Cpe11g00133 Cpe-Chr11:725289 Cpe06g00185 Cpe-Chr6:995417 3.78E-160 wgd
Cpe11g00133 Cpe-Chr11:725289 Cpe07g00503 Cpe-Chr7:3300135 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00133 K06627 - csv:101206145 617.846