Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00137 ATGGTACCACCGTATGCGCTTGATGCTCTTTATTGCTCTGAGGAGCACTGGGAGGAGGACGACAACGAGGAAAGGGGTTTTGACCACCAACCTTACTCTACTTTAACAACCGATTCAACTTCTCCGATTTTGGCTGAGCAGGATCTGTTTTGGGATGACCATGAACTAATTTCTCTGCTTTCAAAAGAGAGGCCCAATGAACTGTTTAAAAGCATTCAGATTGACCCTTCTCTTGCGGCCGCCCGACGACGTGCCGTCGACTGGATGCTGAAGATCAGTGCCCATTTCTCCTTCTCAGCTCTCACTGCGGTTCTCGCCGTCGATTACTTGGACCGGTTTCTGTCCTGTTTTCATTTTCAAACAGACAAGCCGTGGATGTCTCAGCTTGCTGCTGTTGCTTGCATCTCCCTTGCTGCCAAAGTGGAGGAGACCCAAGTCCCTCTTTTATTGGACCTACAAGTGGAAGACAGTAGATATCTGTTTGAAACCAAGACCATTAAGAAGATGGAGCTTCTTGTGCTCTCTACGCTTGAATGGCGGATGAATCCTGTCACCCCATTTTCATTTGTGGATTATATTTCAAGGAGACTGGGATTCAAGGACCATATCTGCTGGGAAATCCTTAGGCAGTGTGAACGAACTATTCTCTCGGTTATCTTAGACTCAGATTTCATGTCGTTTCTTCCTTCTGTAATGGCCACCGCCACAATGCTGCACGCTTTTAAAGCTATGGAGCCCCACTTCGGCGTCGAATACGATTCCCAGCTTCTTACCATCCTCGGAATCGAAAAGGGCAATGTGGAGGAATGCTGTAAGCTGATCTCAGATGCATCTAGAAGAAACGGCAATCAATTTAAGAAACGTAAATTCGGGTCCATTCCGGGCAGCCCAAACGGCGTGATAGACGTGTCATTCAGCTCCGATAGCTCGAATGAGTCATGGTCGGTGGCCTCGTCGGTTTCATCTTCGCCAGAGCCTTCAACGAAGAAGAACAGAGCAATGGATCATCTGCCACTGGAGATGGCGAACCATTCAACAGCTACAAATTGCCTCGACATGTCCTCGCCTGAACCCTCTCTTAATTAA 1086 47.88 MVPPYALDALYCSEEHWEEDDNEERGFDHQPYSTLTTDSTSPILAEQDLFWDDHELISLLSKERPNELFKSIQIDPSLAAARRRAVDWMLKISAHFSFSALTAVLAVDYLDRFLSCFHFQTDKPWMSQLAAVACISLAAKVEETQVPLLLDLQVEDSRYLFETKTIKKMELLVLSTLEWRMNPVTPFSFVDYISRRLGFKDHICWEILRQCERTILSVILDSDFMSFLPSVMATATMLHAFKAMEPHFGVEYDSQLLTILGIEKGNVEECCKLISDASRRNGNQFKKRKFGSIPGSPNGVIDVSFSSDSSNESWSVASSVSSSPEPSTKKNRAMDHLPLEMANHSTATNCLDMSSPEPSLN 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 738016 739925 - Cp4.1LG11g01400.1 Cpe11g00137 476931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00137 361 MobiDBLite consensus disorder prediction 342 361 - -
Cpe11g00137 361 MobiDBLite consensus disorder prediction 311 328 - -
Cpe11g00137 361 PANTHER CYCLINS 36 332 IPR039361 -
Cpe11g00137 361 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Cpe11g00137 361 SUPERFAMILY Cyclin-like 185 282 IPR036915 -
Cpe11g00137 361 SMART cyclin_7 87 175 IPR013763 -
Cpe11g00137 361 Gene3D - 67 182 - -
Cpe11g00137 361 SUPERFAMILY Cyclin-like 73 182 IPR036915 -
Cpe11g00137 361 CDD CYCLIN 82 174 IPR013763 -
Cpe11g00137 361 Pfam Cyclin, C-terminal domain 184 288 IPR004367 -
Cpe11g00137 361 Pfam Cyclin, N-terminal domain 72 182 IPR006671 -
Cpe11g00137 361 Gene3D - 183 272 - -
Cpe11g00137 361 MobiDBLite consensus disorder prediction 311 361 - -
Cpe11g00137 361 PANTHER CYCLIN D3.1 PROTEIN 36 332 - -
Cpe11g00137 361 SMART Cyclin_C_2 184 309 IPR004367 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00498 Cpe11g00137 CCT
Cpe06g00180 Cpe11g00137 CCT
Cpe07g00498 Cpe11g00137 ECH
Cpe06g00180 Cpe11g00137 ECH
Cpe02g00199 Cpe11g00137 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe19g00744 Cpe-Chr19:5745874 Cpe11g00137 Cpe-Chr11:738016 1.09E-52 dispersed
Cpe01g00427 Cpe-Chr1:2468894 Cpe11g00137 Cpe-Chr11:738016 1.28E-98 wgd
Cpe11g00137 Cpe-Chr11:738016 Cpe14g00286 Cpe-Chr14:1670885 6.56E-102 wgd
Cpe11g00137 Cpe-Chr11:738016 Cpe15g00473 Cpe-Chr15:5737985 1.49E-80 wgd
Cpe11g00137 Cpe-Chr11:738016 Cpe19g00642 Cpe-Chr19:5181481 2.67E-96 wgd
Cpe11g00137 Cpe-Chr11:738016 Cpe02g00199 Cpe-Chr2:1031220 1.21E-72 wgd
Cpe11g00137 Cpe-Chr11:738016 Cpe04g00298 Cpe-Chr4:3757790 5.17E-74 wgd
Cpe11g00137 Cpe-Chr11:738016 Cpe06g00180 Cpe-Chr6:976067 1.58E-113 wgd
Cpe11g00137 Cpe-Chr11:738016 Cpe07g00498 Cpe-Chr7:3257734 2.91E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00137 K14505 - csv:101205442 528.094