Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00144 | ATGTCTAGTTATGCCTTCTTGAATGACCAGCTCTCCAAGCGGACCTCCATTTTCGGTTTGCGCTTGTGGGTCGTTTTGGGTATTGGCGTTGGTGCCGCCATTGTTATTGTTCTGTTCCTCATTTCGCTATGGTTCACCTCCAGGCGCAACAGTTCCAATAAATCTAAGTCCTCTCTAAACCCCACTATCCCGAATGTGTCCAAGGAAATCCAGGAAATACGAATCGACCATTCTCGGAATCCAACTCATTCTGATCCTCCTAAAGTTCAAGTGGCTTCGAACCCTGAGCCCTTGCCGGAGGCAGAGCCTTTAGCGACGCTGCTTCAGACGGAAGAAGGGAGCCCACCTAGTGGACGCCATAGAATTCACATTGAAATTGGGAAGGACCACCGGATTTCTTATCCGGAGAGAGTCGGCGGTTCATCCCACGGTAGCGGAGAGGTTCGGTCCGGTGACCAGGCGCCGGTGGTTGTGCCGGAGGTTTCCCATTTGGGTTGGGGACATTGGTACACTCTCAGAGAGCTCGAGTATTCTACTGCTGGTTTTTCGGATGAAAATGTAATCGGTGAGGGCGGATATGGTATTGTGTACCGTGGTGTTCTGGAGGACAACACTGTGAAATTTTATGCAATATTGCTTGTCATCAGGGGACAGGCCGAGAGAGAGTTTAAGGTTGAAGTTGAAGCAATTGGACGCGTACGGCACAAGAATCTGGTGCGTTTGCTCGGCTATTGTGCAGAAGGAGCTCACAGGATGCTTGTTTATGAGTACGTCGATAATGGAAACTTGGAACAGTGGCTTCATGGAGAAGTTGGGCCTTGTAGTCCTCTCACATGGGACATTCGAATGAATATAATTGTTGGAACAGCGAAAGGGTTAACATACCTCCATGAGGGGCTTGAGCCTAAGGTTGTTCACCGTGATATCAAGTCAAGTAACATTTTGCTTGATAAGCAGTGGAATACAAAGGTCTCTGACTTTGGCCTAGCAAAGCTTCTAGGCTCAGAGAGGAGTTACGTAACAACCCGTGTGATGGGAACTTTCGGATATGTAGCTCCAGAATATGCGAGTACTGGCATGTTAAATGAAAAAAGTGATGTATATAGTTTTGGCATCCTCATTATGGAGATAATTACAGGGAGAAATCCAGTAGATTATAGCCGCCCTTCAGGAGAGGTCAACCTAGTTGAGTGGCTTAAAACAATGGTTAGTAATCGAAACGCAGAGGGGGTTCTGGATCCTAAGTTGCCTGAGAAGCCTTCAACAAGGGCACTGAAGCGTGCTCTGCTAGTAGCTTTACGATGTGTGGATCCTAATGTTCAGAAGAGGCCTAAAATGGGGCATGTCATTCATATGCTTGAAGCTGACGAGTTCCCTTTCCGAGATGATCGTAGAGTGGGACGGGAAGTGGGACGATCAGTACTGAAGGAAAGACTGATGGAAAGGCTTGTGAGTGAATCTGGAGAGAGCAGCGGATATGAAAGTGGAGCAACACAAGCAAGCCGTCATCTATGGAGAAAGCAAGAACTGGAAGAACAACAACAACCTCGCGAACCTCACACTTTAAGGTGA | 1572 | 47.65 | MSSYAFLNDQLSKRTSIFGLRLWVVLGIGVGAAIVIVLFLISLWFTSRRNSSNKSKSSLNPTIPNVSKEIQEIRIDHSRNPTHSDPPKVQVASNPEPLPEAEPLATLLQTEEGSPPSGRHRIHIEIGKDHRISYPERVGGSSHGSGEVRSGDQAPVVVPEVSHLGWGHWYTLRELEYSTAGFSDENVIGEGGYGIVYRGVLEDNTVKFYAILLVIRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGEVGPCSPLTWDIRMNIIVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNTKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPSGEVNLVEWLKTMVSNRNAEGVLDPKLPEKPSTRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRVGREVGRSVLKERLMERLVSESGESSGYESGATQASRHLWRKQELEEQQQPREPHTLR | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 786439 | 789172 | + | Cp4.1LG11g01500.1 | Cpe11g00144 | 476938 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00144 | 523 | MobiDBLite | consensus disorder prediction | 77 | 96 | - | - | |
Cpe11g00144 | 523 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 5 | 498 | - | - | |
Cpe11g00144 | 523 | PANTHER | OS01G0323000 PROTEIN | 5 | 498 | - | - | |
Cpe11g00144 | 523 | SUPERFAMILY | Protein kinase-like (PK-like) | 163 | 454 | IPR011009 | - | |
Cpe11g00144 | 523 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 304 | 316 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g00144 | 523 | Gene3D | Transferase(Phosphotransferase) domain 1 | 258 | 466 | - | - | |
Cpe11g00144 | 523 | MobiDBLite | consensus disorder prediction | 484 | 523 | - | - | |
Cpe11g00144 | 523 | SMART | serkin_6 | 182 | 460 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00144 | 523 | Gene3D | Phosphorylase Kinase; domain 1 | 160 | 257 | - | - | |
Cpe11g00144 | 523 | MobiDBLite | consensus disorder prediction | 488 | 502 | - | - | |
Cpe11g00144 | 523 | MobiDBLite | consensus disorder prediction | 504 | 523 | - | - | |
Cpe11g00144 | 523 | Pfam | Protein kinase domain | 183 | 451 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00144 | 523 | CDD | STKc_IRAK | 188 | 454 | - | - | |
Cpe11g00144 | 523 | ProSiteProfiles | Protein kinase domain profile. | 182 | 440 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00123 | Cpe-Chr4:1113601 | Cpe11g00144 | Cpe-Chr11:786439 | 1.48E-170 | dispersed | |
Cpe11g00144 | Cpe-Chr11:786439 | Cpe16g00727 | Cpe-Chr16:7384870 | 7.56E-180 | dispersed | |
Cpe10g00441 | Cpe-Chr10:2576118 | Cpe11g00144 | Cpe-Chr11:786439 | 0 | wgd | |
Cpe11g00144 | Cpe-Chr11:786439 | Cpe19g00628 | Cpe-Chr19:5107618 | 0 | wgd | |
Cpe11g00144 | Cpe-Chr11:786439 | Cpe07g00490 | Cpe-Chr7:3199557 | 1.49E-47 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62698 | PF00069 | Pkinase | 1.10E-44 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00144 | - | - | cpep:111805169 | 973.0 |