Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00144 ATGTCTAGTTATGCCTTCTTGAATGACCAGCTCTCCAAGCGGACCTCCATTTTCGGTTTGCGCTTGTGGGTCGTTTTGGGTATTGGCGTTGGTGCCGCCATTGTTATTGTTCTGTTCCTCATTTCGCTATGGTTCACCTCCAGGCGCAACAGTTCCAATAAATCTAAGTCCTCTCTAAACCCCACTATCCCGAATGTGTCCAAGGAAATCCAGGAAATACGAATCGACCATTCTCGGAATCCAACTCATTCTGATCCTCCTAAAGTTCAAGTGGCTTCGAACCCTGAGCCCTTGCCGGAGGCAGAGCCTTTAGCGACGCTGCTTCAGACGGAAGAAGGGAGCCCACCTAGTGGACGCCATAGAATTCACATTGAAATTGGGAAGGACCACCGGATTTCTTATCCGGAGAGAGTCGGCGGTTCATCCCACGGTAGCGGAGAGGTTCGGTCCGGTGACCAGGCGCCGGTGGTTGTGCCGGAGGTTTCCCATTTGGGTTGGGGACATTGGTACACTCTCAGAGAGCTCGAGTATTCTACTGCTGGTTTTTCGGATGAAAATGTAATCGGTGAGGGCGGATATGGTATTGTGTACCGTGGTGTTCTGGAGGACAACACTGTGAAATTTTATGCAATATTGCTTGTCATCAGGGGACAGGCCGAGAGAGAGTTTAAGGTTGAAGTTGAAGCAATTGGACGCGTACGGCACAAGAATCTGGTGCGTTTGCTCGGCTATTGTGCAGAAGGAGCTCACAGGATGCTTGTTTATGAGTACGTCGATAATGGAAACTTGGAACAGTGGCTTCATGGAGAAGTTGGGCCTTGTAGTCCTCTCACATGGGACATTCGAATGAATATAATTGTTGGAACAGCGAAAGGGTTAACATACCTCCATGAGGGGCTTGAGCCTAAGGTTGTTCACCGTGATATCAAGTCAAGTAACATTTTGCTTGATAAGCAGTGGAATACAAAGGTCTCTGACTTTGGCCTAGCAAAGCTTCTAGGCTCAGAGAGGAGTTACGTAACAACCCGTGTGATGGGAACTTTCGGATATGTAGCTCCAGAATATGCGAGTACTGGCATGTTAAATGAAAAAAGTGATGTATATAGTTTTGGCATCCTCATTATGGAGATAATTACAGGGAGAAATCCAGTAGATTATAGCCGCCCTTCAGGAGAGGTCAACCTAGTTGAGTGGCTTAAAACAATGGTTAGTAATCGAAACGCAGAGGGGGTTCTGGATCCTAAGTTGCCTGAGAAGCCTTCAACAAGGGCACTGAAGCGTGCTCTGCTAGTAGCTTTACGATGTGTGGATCCTAATGTTCAGAAGAGGCCTAAAATGGGGCATGTCATTCATATGCTTGAAGCTGACGAGTTCCCTTTCCGAGATGATCGTAGAGTGGGACGGGAAGTGGGACGATCAGTACTGAAGGAAAGACTGATGGAAAGGCTTGTGAGTGAATCTGGAGAGAGCAGCGGATATGAAAGTGGAGCAACACAAGCAAGCCGTCATCTATGGAGAAAGCAAGAACTGGAAGAACAACAACAACCTCGCGAACCTCACACTTTAAGGTGA 1572 47.65 MSSYAFLNDQLSKRTSIFGLRLWVVLGIGVGAAIVIVLFLISLWFTSRRNSSNKSKSSLNPTIPNVSKEIQEIRIDHSRNPTHSDPPKVQVASNPEPLPEAEPLATLLQTEEGSPPSGRHRIHIEIGKDHRISYPERVGGSSHGSGEVRSGDQAPVVVPEVSHLGWGHWYTLRELEYSTAGFSDENVIGEGGYGIVYRGVLEDNTVKFYAILLVIRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGEVGPCSPLTWDIRMNIIVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNTKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPSGEVNLVEWLKTMVSNRNAEGVLDPKLPEKPSTRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRVGREVGRSVLKERLMERLVSESGESSGYESGATQASRHLWRKQELEEQQQPREPHTLR 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 786439 789172 + Cp4.1LG11g01500.1 Cpe11g00144 476938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00144 523 MobiDBLite consensus disorder prediction 77 96 - -
Cpe11g00144 523 PANTHER RECEPTOR-LIKE KINASE PLANT 5 498 - -
Cpe11g00144 523 PANTHER OS01G0323000 PROTEIN 5 498 - -
Cpe11g00144 523 SUPERFAMILY Protein kinase-like (PK-like) 163 454 IPR011009 -
Cpe11g00144 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Cpe11g00144 523 Gene3D Transferase(Phosphotransferase) domain 1 258 466 - -
Cpe11g00144 523 MobiDBLite consensus disorder prediction 484 523 - -
Cpe11g00144 523 SMART serkin_6 182 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00144 523 Gene3D Phosphorylase Kinase; domain 1 160 257 - -
Cpe11g00144 523 MobiDBLite consensus disorder prediction 488 502 - -
Cpe11g00144 523 MobiDBLite consensus disorder prediction 504 523 - -
Cpe11g00144 523 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00144 523 CDD STKc_IRAK 188 454 - -
Cpe11g00144 523 ProSiteProfiles Protein kinase domain profile. 182 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00123 Cpe-Chr4:1113601 Cpe11g00144 Cpe-Chr11:786439 1.48E-170 dispersed
Cpe11g00144 Cpe-Chr11:786439 Cpe16g00727 Cpe-Chr16:7384870 7.56E-180 dispersed
Cpe10g00441 Cpe-Chr10:2576118 Cpe11g00144 Cpe-Chr11:786439 0 wgd
Cpe11g00144 Cpe-Chr11:786439 Cpe19g00628 Cpe-Chr19:5107618 0 wgd
Cpe11g00144 Cpe-Chr11:786439 Cpe07g00490 Cpe-Chr7:3199557 1.49E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62698 PF00069 Pkinase 1.10E-44 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00144 - - cpep:111805169 973.0