Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00148 | ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGTGGAGATGGAAGACCTCCGGCCAACTATCCGTTAGCACGACAATCATCGATCTACTCCCTCACCTTCGATGAGTTTCAGAGCATGGGGAGCATAGGCAAGGATTTTGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACTATGACATCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGGTAAAGAAGGGGCTGGTACTGTTGGCGGTAGTAGTGGGTATTTGCAGAGACAGGGATCTTTGACGCTGCCAAGGACACTCAGCCAGAGGAAGGTGGATGAAGTTTGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGATGGGAATACTGTTGCTTCTAATTTGGAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAAGATACTCAAGTGACTGCAAACCCCAACAATGGAGGGTTCTTTGGCAACAACACTGGTTTTGGAATTGCTTTTCAGCGGCAAGCTAAAGTTCCTGAGAATAACAATCAGATTCCGGTTCAACCGTCAAACTTATCGTTAAATGTCAATGGAGTTCGAGCACATCCGCCGCAGCCAATATTTCCAAAGCAGCCTACTGTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGAATTAGAGGTGGAATTATGGGGATTGCAGATCAAGGGTTGAGCACAAATTTGATGCACGGGTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTTAATTTAACAGCTGGTCCGTTACCTATTGCAACAGAATCTCCAGTGAACCAACTATCATCAGATGGGATTGGAAAGAGCAATGGCGATACCTCGTCCGTGTCTCCTGTGCCTTACGCGCTTAATGGTGGAATCAGAGGGAGGAGAAGTAATGGGACTGTCGAAAAAGTCGTCGAGAGGAGACAACGGAGAATGATAAAAAACAGAGAGTCTGCTGCGAGATCACGGGCTCGAAAGCAGGCTTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGATAACCAAGAACTCCGGAGAAAACAGGCAGAAATCATGGAAATGCAGAAAACCCGGGCGTTGGAAGTAATGGACAATCAACAAGGAATCAAGAAGCAATGCTTAAGACGAACGCAGACTGGCCCATGGTGA | 1251 | 47.0 | MNFKDFGNDPSAGNGGGDGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMTSSAAAAAAAAVGKEGAGTVGGSSGYLQRQGSLTLPRTLSQRKVDEVWKDIINEHASAKDGNTVASNLEQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNTGFGIAFQRQAKVPENNNQIPVQPSNLSLNVNGVRAHPPQPIFPKQPTVTYGSQLALPSDGQLASPGIRGGIMGIADQGLSTNLMHGSALQGGRMGVVNLTAGPLPIATESPVNQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRSNGTVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEDNQELRRKQAEIMEMQKTRALEVMDNQQGIKKQCLRRTQTGPW | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 816688 | 821053 | - | Cp4.1LG11g01560.1 | Cpe11g00148 | 476942 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00148 | 416 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 209 | 416 | - | - | |
Cpe11g00148 | 416 | PANTHER | BINDING PROTEIN, PUTATIVE-RELATED | 5 | 180 | - | - | |
Cpe11g00148 | 416 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 5 | 180 | IPR043452 | GO:0003700|GO:0045893 | |
Cpe11g00148 | 416 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 209 | 416 | IPR043452 | GO:0003700|GO:0045893 | |
Cpe11g00148 | 416 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cpe11g00148 | 416 | Coils | Coil | 361 | 391 | - | - | |
Cpe11g00148 | 416 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 341 | 356 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe11g00148 | 416 | SMART | brlzneu | 334 | 398 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe11g00148 | 416 | CDD | bZIP_plant_BZIP46 | 338 | 391 | - | - | |
Cpe11g00148 | 416 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 336 | 387 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe11g00148 | 416 | Pfam | bZIP transcription factor | 338 | 390 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe11g00148 | 416 | Gene3D | - | 336 | 392 | - | - | |
Cpe11g00148 | 416 | SUPERFAMILY | Leucine zipper domain | 338 | 387 | IPR046347 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00488 | Cpe11g00148 | CCT | |
Cpe07g00488 | Cpe11g00148 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g02159 | Cpe-Chr1:18147702 | Cpe11g00148 | Cpe-Chr11:816688 | 8.09E-30 | dispersed | |
Cpe04g00422 | Cpe-Chr4:4897390 | Cpe11g00148 | Cpe-Chr11:816688 | 4.80E-09 | dispersed | |
Cpe11g00148 | Cpe-Chr11:816688 | Cpe13g00725 | Cpe-Chr13:6677716 | 3.56E-29 | dispersed | |
Cpe14g01038 | Cpe-Chr14:8721098 | Cpe11g00148 | Cpe-Chr11:816688 | 2.76E-18 | transposed | |
Cpe11g00148 | Cpe-Chr11:816688 | Cpe15g00484 | Cpe-Chr15:5830895 | 6.80E-18 | wgd | |
Cpe11g00148 | Cpe-Chr11:816688 | Cpe04g00286 | Cpe-Chr4:3565748 | 1.19E-78 | wgd | |
Cpe11g00148 | Cpe-Chr11:816688 | Cpe07g00488 | Cpe-Chr7:3178920 | 1.35E-14 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50202 | PF00170 | bZIP_1 | 1.60E-12 | CL0018 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00148 | K14432 | - | csv:101223043 | 718.768 |