Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00148 ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGTGGAGATGGAAGACCTCCGGCCAACTATCCGTTAGCACGACAATCATCGATCTACTCCCTCACCTTCGATGAGTTTCAGAGCATGGGGAGCATAGGCAAGGATTTTGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACTATGACATCTTCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGGTAAAGAAGGGGCTGGTACTGTTGGCGGTAGTAGTGGGTATTTGCAGAGACAGGGATCTTTGACGCTGCCAAGGACACTCAGCCAGAGGAAGGTGGATGAAGTTTGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGATGGGAATACTGTTGCTTCTAATTTGGAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAAGATACTCAAGTGACTGCAAACCCCAACAATGGAGGGTTCTTTGGCAACAACACTGGTTTTGGAATTGCTTTTCAGCGGCAAGCTAAAGTTCCTGAGAATAACAATCAGATTCCGGTTCAACCGTCAAACTTATCGTTAAATGTCAATGGAGTTCGAGCACATCCGCCGCAGCCAATATTTCCAAAGCAGCCTACTGTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGAATTAGAGGTGGAATTATGGGGATTGCAGATCAAGGGTTGAGCACAAATTTGATGCACGGGTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTTAATTTAACAGCTGGTCCGTTACCTATTGCAACAGAATCTCCAGTGAACCAACTATCATCAGATGGGATTGGAAAGAGCAATGGCGATACCTCGTCCGTGTCTCCTGTGCCTTACGCGCTTAATGGTGGAATCAGAGGGAGGAGAAGTAATGGGACTGTCGAAAAAGTCGTCGAGAGGAGACAACGGAGAATGATAAAAAACAGAGAGTCTGCTGCGAGATCACGGGCTCGAAAGCAGGCTTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGATAACCAAGAACTCCGGAGAAAACAGGCAGAAATCATGGAAATGCAGAAAACCCGGGCGTTGGAAGTAATGGACAATCAACAAGGAATCAAGAAGCAATGCTTAAGACGAACGCAGACTGGCCCATGGTGA 1251 47.0 MNFKDFGNDPSAGNGGGDGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMTSSAAAAAAAAVGKEGAGTVGGSSGYLQRQGSLTLPRTLSQRKVDEVWKDIINEHASAKDGNTVASNLEQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNTGFGIAFQRQAKVPENNNQIPVQPSNLSLNVNGVRAHPPQPIFPKQPTVTYGSQLALPSDGQLASPGIRGGIMGIADQGLSTNLMHGSALQGGRMGVVNLTAGPLPIATESPVNQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRSNGTVEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEDNQELRRKQAEIMEMQKTRALEVMDNQQGIKKQCLRRTQTGPW 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 816688 821053 - Cp4.1LG11g01560.1 Cpe11g00148 476942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00148 416 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 209 416 - -
Cpe11g00148 416 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 180 - -
Cpe11g00148 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 5 180 IPR043452 GO:0003700|GO:0045893
Cpe11g00148 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 209 416 IPR043452 GO:0003700|GO:0045893
Cpe11g00148 416 MobiDBLite consensus disorder prediction 1 26 - -
Cpe11g00148 416 Coils Coil 361 391 - -
Cpe11g00148 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 341 356 IPR004827 GO:0003700|GO:0006355
Cpe11g00148 416 SMART brlzneu 334 398 IPR004827 GO:0003700|GO:0006355
Cpe11g00148 416 CDD bZIP_plant_BZIP46 338 391 - -
Cpe11g00148 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 336 387 IPR004827 GO:0003700|GO:0006355
Cpe11g00148 416 Pfam bZIP transcription factor 338 390 IPR004827 GO:0003700|GO:0006355
Cpe11g00148 416 Gene3D - 336 392 - -
Cpe11g00148 416 SUPERFAMILY Leucine zipper domain 338 387 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00488 Cpe11g00148 CCT
Cpe07g00488 Cpe11g00148 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02159 Cpe-Chr1:18147702 Cpe11g00148 Cpe-Chr11:816688 8.09E-30 dispersed
Cpe04g00422 Cpe-Chr4:4897390 Cpe11g00148 Cpe-Chr11:816688 4.80E-09 dispersed
Cpe11g00148 Cpe-Chr11:816688 Cpe13g00725 Cpe-Chr13:6677716 3.56E-29 dispersed
Cpe14g01038 Cpe-Chr14:8721098 Cpe11g00148 Cpe-Chr11:816688 2.76E-18 transposed
Cpe11g00148 Cpe-Chr11:816688 Cpe15g00484 Cpe-Chr15:5830895 6.80E-18 wgd
Cpe11g00148 Cpe-Chr11:816688 Cpe04g00286 Cpe-Chr4:3565748 1.19E-78 wgd
Cpe11g00148 Cpe-Chr11:816688 Cpe07g00488 Cpe-Chr7:3178920 1.35E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50202 PF00170 bZIP_1 1.60E-12 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00148 K14432 - csv:101223043 718.768