Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00151 ATGGACGGTGGTGATGGGACTGTGAGGCTTGGGGCTCTGAACATGAAGTCGGATCGAAGCGGATTGGATTTGGGCCCCGATGTGTCTGTTTCGTCTCCGGTGACCAGGCAGAAAGCCGCCGCTGCTAAGCAGTTCATTGAGAATCATTACAAGAACTATCTCCAAGGTCTTCAAGATCGCAAGGACAGACGGAGAACGCTTCAACGAAGAGTGCAAGAAGCTCAGATGTCGGCAGAAGAACAAGAAGAGATGCTGAGGAACTTGGAACGCAGAGAAACAGAATTTATGAGACTGCAAAGACGTAAAGTTGGAATCGATGACTTTGAACAATTAACAGTCATCGGTAAAGGTGCATTCGGCGAGGTTAGGTTATGTCGTGCAAAAGGAACTGGGGAAATTTTTGCCATGAAAAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCACGTTCGATCTGAGAGGAATTTACTTGCAGAGGTTGATAGTAGGTGCATTGTAAAACTCTTTTATTCTTTTCAAGATTCTGAGTTCTTATACCTTATTATGGAGTATTTACCTGGTGGTGACATTATGACGTTGCTAATGAGAGAAGACATTCTGTCCGAGGATGTTGCTCGCTTTTACATAGCAGAGAGCATTTTAGCTATTCATTCAATTCATCAGCACAATTATATACATAGGGATATAAAACCAGATAACTTGATCCTAGATAAAAATGGTCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTACTCAAGTATACTTTTGAATGACGAAGACTTAACTGCCCAGCAGACCAAAAGTGAAGGTCAAGATCATACTGACTCTAATGGATCCCAATGGATGATGCCGAAAGAACAAATTCAACAGTGGAAGCGTAATCGTCGTGCGTTGGCTTTTTCAACTGTTGGGACCCTGGATTATATGGCACCTGAAGTATTGCTTAAGAAAGGGTATGGAATGGAGTGTGATTGGTGGTCATTAGGGGCCATTATGTATGAGATGCTGGCTGGTTATCCTCCTTTTTGTTCTGATGATCCAAGGATGACCTTCCGCAAGATAATAAATTGGCGAACTTGCCTGAAATTTCCCGAGGAACCAAAAATCTCTGAGCAAGCCAAGGACCTGATCAGCCACTTGCTTTGTGATGTTGAAACAAGGTTGGGAACACGAGTAGTAGAAGAAATAAAGGCACATCCATGGTTCAAAGGGATTCAGTGGGATAAGCTGTATGAAATGGAACCTGCATATAAACCAACTGTCACTGGAGAACTAGACACTCAGAACTTTGAGAAGTTTCCTGAGGTTCAAGACCCTCCCTCAGAAATGCCAACTGTTGGACCTTGGAGAAAGATGCTAACTTCAAAAGATACGAATTTCATTGGATTTACTTTCAAGAAGTCAAACGTCAAATCACTTGAGGGTACAGGTCCAGATACGCATTCAAACACATCATCAAAAACCCCATCTCTAGTTTCCTTGTTGGGTCGAATAGACTTGCAAGAAACAGTGATACCAGAAATTGAACAAAAGCAGGTAGAATAA 1572 42.62 MDGGDGTVRLGALNMKSDRSGLDLGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRTLQRRVQEAQMSAEEQEEMLRNLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDLTAQQTKSEGQDHTDSNGSQWMMPKEQIQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFCSDDPRMTFRKIINWRTCLKFPEEPKISEQAKDLISHLLCDVETRLGTRVVEEIKAHPWFKGIQWDKLYEMEPAYKPTVTGELDTQNFEKFPEVQDPPSEMPTVGPWRKMLTSKDTNFIGFTFKKSNVKSLEGTGPDTHSNTSSKTPSLVSLLGRIDLQETVIPEIEQKQVE 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 846568 851337 + Cp4.1LG11g01490.1 Cpe11g00151 476945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00151 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Cpe11g00151 523 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cpe11g00151 523 Coils Coil 57 101 - -
Cpe11g00151 523 CDD STKc_NDR_like 106 475 - -
Cpe11g00151 523 SMART serkin_6 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00151 523 Pfam Protein kinase C terminal domain 430 474 IPR017892 GO:0004674|GO:0005524|GO:0006468
Cpe11g00151 523 Gene3D Phosphorylase Kinase; domain 1 430 441 - -
Cpe11g00151 523 SUPERFAMILY Protein kinase-like (PK-like) 105 474 IPR011009 -
Cpe11g00151 523 SMART pkinase_C_6 412 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cpe11g00151 523 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Cpe11g00151 523 Pfam Protein kinase domain 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00151 523 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 509 - -
Cpe11g00151 523 Gene3D Phosphorylase Kinase; domain 1 73 191 - -
Cpe11g00151 523 Gene3D Transferase(Phosphotransferase) domain 1 192 259 - -
Cpe11g00151 523 ProSiteProfiles Protein kinase domain profile. 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00151 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 509 - -
Cpe11g00151 523 Gene3D Transferase(Phosphotransferase) domain 1 309 429 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00486 Cpe11g00151 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00151 Cpe-Chr11:846568 Cpe17g00198 Cpe-Chr17:1277546 0 dispersed
Cpe11g00151 Cpe-Chr11:846568 Cpe07g00486 Cpe-Chr7:3166307 4.83E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62699 PF00069 Pkinase 1.60E-64 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00151 K08790 - csv:101222805 989.949