Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00151 | ATGGACGGTGGTGATGGGACTGTGAGGCTTGGGGCTCTGAACATGAAGTCGGATCGAAGCGGATTGGATTTGGGCCCCGATGTGTCTGTTTCGTCTCCGGTGACCAGGCAGAAAGCCGCCGCTGCTAAGCAGTTCATTGAGAATCATTACAAGAACTATCTCCAAGGTCTTCAAGATCGCAAGGACAGACGGAGAACGCTTCAACGAAGAGTGCAAGAAGCTCAGATGTCGGCAGAAGAACAAGAAGAGATGCTGAGGAACTTGGAACGCAGAGAAACAGAATTTATGAGACTGCAAAGACGTAAAGTTGGAATCGATGACTTTGAACAATTAACAGTCATCGGTAAAGGTGCATTCGGCGAGGTTAGGTTATGTCGTGCAAAAGGAACTGGGGAAATTTTTGCCATGAAAAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCACGTTCGATCTGAGAGGAATTTACTTGCAGAGGTTGATAGTAGGTGCATTGTAAAACTCTTTTATTCTTTTCAAGATTCTGAGTTCTTATACCTTATTATGGAGTATTTACCTGGTGGTGACATTATGACGTTGCTAATGAGAGAAGACATTCTGTCCGAGGATGTTGCTCGCTTTTACATAGCAGAGAGCATTTTAGCTATTCATTCAATTCATCAGCACAATTATATACATAGGGATATAAAACCAGATAACTTGATCCTAGATAAAAATGGTCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTACTCAAGTATACTTTTGAATGACGAAGACTTAACTGCCCAGCAGACCAAAAGTGAAGGTCAAGATCATACTGACTCTAATGGATCCCAATGGATGATGCCGAAAGAACAAATTCAACAGTGGAAGCGTAATCGTCGTGCGTTGGCTTTTTCAACTGTTGGGACCCTGGATTATATGGCACCTGAAGTATTGCTTAAGAAAGGGTATGGAATGGAGTGTGATTGGTGGTCATTAGGGGCCATTATGTATGAGATGCTGGCTGGTTATCCTCCTTTTTGTTCTGATGATCCAAGGATGACCTTCCGCAAGATAATAAATTGGCGAACTTGCCTGAAATTTCCCGAGGAACCAAAAATCTCTGAGCAAGCCAAGGACCTGATCAGCCACTTGCTTTGTGATGTTGAAACAAGGTTGGGAACACGAGTAGTAGAAGAAATAAAGGCACATCCATGGTTCAAAGGGATTCAGTGGGATAAGCTGTATGAAATGGAACCTGCATATAAACCAACTGTCACTGGAGAACTAGACACTCAGAACTTTGAGAAGTTTCCTGAGGTTCAAGACCCTCCCTCAGAAATGCCAACTGTTGGACCTTGGAGAAAGATGCTAACTTCAAAAGATACGAATTTCATTGGATTTACTTTCAAGAAGTCAAACGTCAAATCACTTGAGGGTACAGGTCCAGATACGCATTCAAACACATCATCAAAAACCCCATCTCTAGTTTCCTTGTTGGGTCGAATAGACTTGCAAGAAACAGTGATACCAGAAATTGAACAAAAGCAGGTAGAATAA | 1572 | 42.62 | MDGGDGTVRLGALNMKSDRSGLDLGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRTLQRRVQEAQMSAEEQEEMLRNLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDLTAQQTKSEGQDHTDSNGSQWMMPKEQIQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFCSDDPRMTFRKIINWRTCLKFPEEPKISEQAKDLISHLLCDVETRLGTRVVEEIKAHPWFKGIQWDKLYEMEPAYKPTVTGELDTQNFEKFPEVQDPPSEMPTVGPWRKMLTSKDTNFIGFTFKKSNVKSLEGTGPDTHSNTSSKTPSLVSLLGRIDLQETVIPEIEQKQVE | 523 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 846568 | 851337 | + | Cp4.1LG11g01490.1 | Cpe11g00151 | 476945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00151 | 523 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 227 | 239 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g00151 | 523 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 412 | 484 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cpe11g00151 | 523 | Coils | Coil | 57 | 101 | - | - | |
Cpe11g00151 | 523 | CDD | STKc_NDR_like | 106 | 475 | - | - | |
Cpe11g00151 | 523 | SMART | serkin_6 | 108 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00151 | 523 | Pfam | Protein kinase C terminal domain | 430 | 474 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Cpe11g00151 | 523 | Gene3D | Phosphorylase Kinase; domain 1 | 430 | 441 | - | - | |
Cpe11g00151 | 523 | SUPERFAMILY | Protein kinase-like (PK-like) | 105 | 474 | IPR011009 | - | |
Cpe11g00151 | 523 | SMART | pkinase_C_6 | 412 | 476 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Cpe11g00151 | 523 | ProSitePatterns | Protein kinases ATP-binding region signature. | 114 | 137 | IPR017441 | GO:0005524 | |
Cpe11g00151 | 523 | Pfam | Protein kinase domain | 108 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00151 | 523 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 5 | 509 | - | - | |
Cpe11g00151 | 523 | Gene3D | Phosphorylase Kinase; domain 1 | 73 | 191 | - | - | |
Cpe11g00151 | 523 | Gene3D | Transferase(Phosphotransferase) domain 1 | 192 | 259 | - | - | |
Cpe11g00151 | 523 | ProSiteProfiles | Protein kinase domain profile. | 108 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00151 | 523 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 5 | 509 | - | - | |
Cpe11g00151 | 523 | Gene3D | Transferase(Phosphotransferase) domain 1 | 309 | 429 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00486 | Cpe11g00151 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe11g00151 | Cpe-Chr11:846568 | Cpe17g00198 | Cpe-Chr17:1277546 | 0 | dispersed | |
Cpe11g00151 | Cpe-Chr11:846568 | Cpe07g00486 | Cpe-Chr7:3166307 | 4.83E-155 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62699 | PF00069 | Pkinase | 1.60E-64 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00151 | K08790 | - | csv:101222805 | 989.949 |