Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00172 ATGCCTTTCTTTCACAAAAGCGCTTCACATTCTCGGCTTCAACAGAAGGCGGCCGATTCTAATTTTTCCGTTGTTCAAACCGAATCGCTCGTTCAGCGGCGGCTCACCAGACAGAGGAAGCTCCGGCATGTTACGGATCGAGAAATTGGCGTTGAACTCCCCCGATCATTTCCCGATTCCCCTGATTTATCTGCAAAGCCTAGATCGCCTCTTGGGGGTTCCGAACGTTGGTCCTCGCCGGTTTTGCCCCAGCCTTTGCCTCTGCCGGAGTTATTCCCGGTTCGGAATCCAGAGTCCGATTCTTGGTTTTCTGGCCAAGGCCGTGTGGTCTCGCCTATTGAAACTCCTGTCCGTAATTCTGCTATTAAAACTGTTAGGAAGAGCTCTGATCGTGCAACAACGAATGTAAATGGAGGAGGTCTGGGCAACAATCAAAGGCGAGTTGCTACAGATTGTAAGTTGGAAGTTGTTAATGGCAATACAGGAGGAACTGGGGCTACCACATTTACAAGCCCTCATAGTCCCTCTGTGAACTCAGGTAAATCCCTTTCGATTAAGGAGTTTGTTTTTGGTTGTTTGGATCAGCCTCCAAACAGCAAAGTCAGGGGATCCCCAACTCATCCCAGTATTCAAAGGGGTAACTACAGTTTGACACCTAAGACATTGTCGTCAAAGAGTGCCCCAACAAGCATTTTACCGAGTCCGACCGCTAGCCCACGAAGATCATATACTGGAGATCTTTTCGTTTCTTGTTTGCCTCGCCATGAATATCAGGAATCTCCTTTCAATAATTCTCCCAAAGTTCCACACCTTAAGACTCCACACACTTCTCAACCTTCTCCTCTCCATAGCCAGTCAGCTCGAAGTTTCGTAAGCAATCCCAAATCTCCTAACGATGTGAAATTTCCGACGCATTCTAAGTTACAAAAAGATAGTAGTAGTACAGATCGGTCTGAAAACCTCGGTCATGTCAATGCTCATCCATTGCCACTTCCTCCTCCATTAGCACACTCTTCACAATCATCTCCACGGTCGCTTTCGTCGAGCGTTCATCATGTTAATGAGAAGCCGTACATTTCATCTACGAAAAGTCGGTGGCAAAAAGGAAAGCTCATTGGACGTGGTACTTTTGGAAGTGTTTATCTTGCAACCAACAGTGAAACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCTGATGATCCTAAATGTGCTGAAAGTATAAAGCAACTAGAGCAGGAGATTAAAGTTCTAAGTCAACTGAAGCATCCAAATATTGTACAGTATTATGGAAGTGAAATAATCGATGATCATTTCTATATATATTTGGAGTATGTTTATCCCGGGTCGATAAATAAATACGTTCGTGAACGTTGTGGAGCCATTACAGAATCTATTGTTCGCAATTTCACCCGACATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAAACAATCCACAGGGATATCAAAGGTGCAAACTTGCTAGTTGACTCGTCAGGCGTCGTCAAACTTGCAGATTTCGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCGTACTGGATGGCTCCGGAGGTCATGAAGGCTGCTATGTTGAAAGATGCCAACCCTAATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTTGATGGAAAACCTCCGTGGAGTGAGTTTGAAGGGCATCAAGCCATGTTCAAGGTGTTGAATAAAACCCCGCCTATCCCGGAAAAGCTATCTCCAGAAGGGAAAGACTTCCTCCAGTGCTGCTTTCAAAGGAATCCAGCTGACAGACCAACAGCCATGGCGCTCCTTGACCATCCATTCTTAAGATCCTCAAATGACTCGAATGTTTCAACCCCCACGTCTGCATTTTCGACAATGAACCTCATGGAAAAACTGTTGAGTCCGAAGGACCACCGTAGTCCCAAAGGAGATCAGGCGCGAAACTCGTCTGGAACTTTGGCTGCAAATGATTATCTGTCGTGCCGTAGCCCTTCAACGAACATTTCAAGCAATATTCCTGCCAGTGCCGTTAACAACCATCCCTTTGCTATTTCAAGGACTCATAAAAGGGAAGTGCCTCACCTCTGA 2142 45.61 MPFFHKSASHSRLQQKAADSNFSVVQTESLVQRRLTRQRKLRHVTDREIGVELPRSFPDSPDLSAKPRSPLGGSERWSSPVLPQPLPLPELFPVRNPESDSWFSGQGRVVSPIETPVRNSAIKTVRKSSDRATTNVNGGGLGNNQRRVATDCKLEVVNGNTGGTGATTFTSPHSPSVNSGKSLSIKEFVFGCLDQPPNSKVRGSPTHPSIQRGNYSLTPKTLSSKSAPTSILPSPTASPRRSYTGDLFVSCLPRHEYQESPFNNSPKVPHLKTPHTSQPSPLHSQSARSFVSNPKSPNDVKFPTHSKLQKDSSSTDRSENLGHVNAHPLPLPPPLAHSSQSSPRSLSSSVHHVNEKPYISSTKSRWQKGKLIGRGTFGSVYLATNSETGALCAMKEVDLIPDDPKCAESIKQLEQEIKVLSQLKHPNIVQYYGSEIIDDHFYIYLEYVYPGSINKYVRERCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPYWMAPEVMKAAMLKDANPNLALAVDIWSLGCTIIEMLDGKPPWSEFEGHQAMFKVLNKTPPIPEKLSPEGKDFLQCCFQRNPADRPTAMALLDHPFLRSSNDSNVSTPTSAFSTMNLMEKLLSPKDHRSPKGDQARNSSGTLAANDYLSCRSPSTNISSNIPASAVNNHPFAISRTHKREVPHL 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 933038 936812 - Cp4.1LG11g01780.1 Cpe11g00172 476966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00172 713 PANTHER - 1 703 - -
Cpe11g00172 713 MobiDBLite consensus disorder prediction 199 243 - -
Cpe11g00172 713 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 703 - -
Cpe11g00172 713 MobiDBLite consensus disorder prediction 258 303 - -
Cpe11g00172 713 MobiDBLite consensus disorder prediction 196 243 - -
Cpe11g00172 713 MobiDBLite consensus disorder prediction 338 354 - -
Cpe11g00172 713 MobiDBLite consensus disorder prediction 123 144 - -
Cpe11g00172 713 MobiDBLite consensus disorder prediction 258 354 - -
Cpe11g00172 713 Gene3D Transferase(Phosphotransferase) domain 1 362 663 - -
Cpe11g00172 713 ProSiteProfiles Protein kinase domain profile. 366 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00172 713 Pfam Protein kinase domain 367 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00172 713 MobiDBLite consensus disorder prediction 1 21 - -
Cpe11g00172 713 MobiDBLite consensus disorder prediction 123 145 - -
Cpe11g00172 713 SUPERFAMILY Protein kinase-like (PK-like) 342 661 IPR011009 -
Cpe11g00172 713 SMART serkin_6 366 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00172 713 ProSitePatterns Protein kinases ATP-binding region signature. 372 395 IPR017441 GO:0005524
Cpe11g00172 713 MobiDBLite consensus disorder prediction 52 80 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00458 Cpe11g00172 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00172 Cpe-Chr11:933038 Cpe14g00100 Cpe-Chr14:541122 3.07E-109 dispersed
Cpe10g00425 Cpe-Chr10:2474215 Cpe11g00172 Cpe-Chr11:933038 7.54E-160 wgd
Cpe11g00172 Cpe-Chr11:933038 Cpe19g00606 Cpe-Chr19:4987930 5.61E-170 wgd
Cpe11g00172 Cpe-Chr11:933038 Cpe07g00458 Cpe-Chr7:2927007 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62700 PF00069 Pkinase 2.50E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00172 - - cmo:103487921 1094.34