Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe11g00181 | ATGTTCGAACCACCACCACCTCCGCCGCCGCCCTCCCTTCTCTTCCTTTTCTTCTTCTTCTTCTTCATTTCGTCCATAACCGCCGCCGATGCCATTGCTGTATTCAAGGAGGCCCCCCAATTCTATAACTCCCCGGACTGCCCCTTGGTCGTCACTGGCGAGGAAAACGGTAACCGACTTTGCTCATACGACGGCATCCACGTGGCGATGACATTGGACACCGCATACATCCGAGGGTCCATGGCGGCCGTCCTCTCCGTTCTGCAACATTCCACTTGCCCCCAAAATGTAATATTCCATTTCGTTTCCTCTGCCTCTGCAAACGCGTCGGATCTACGCGCCACAATTTCCTCCTCCTTTCCATACCTGAAATTCCAAATCTACCCGTTCGACGACGACGCCGTGTCTCGTCTGATCTCCACCTCCATCCGATCGGCTCTGGATTGCCCTTTGAACTACGCGCGTAGTTACTTGGCCGACCTCCTTCCTCTCTGTGTCCGTCGTGTCGTCTATCTCGATTCCGATCTAATCCTCGTCGACGACATCGCGAATCTCGCTAATACCCCTCTAAACGATGCCGTTTTAGCCGCCCCGGAGTACTGCAACGCCAATTTCACCTACTATTTCACTCCCACATTCTGGTCCAATCCCTCTCTGTCTCTCACCTTCGCCAATCGCAACCCCTGTTATTTCAACACCGGCGTCATGGTCATCGACCTCGCCCGGTGGCGCCTCGGCGATTTCACCGCCAAAATCGAGGAATGGATGGAGCTTCAGAAGCGGATAAGGATCTACGAGCTGGGATCTCTGCCGCCATTCATGCTCGTTTTCGCCGGAAACATTGCCCCCGTGGACCACCGCTGGAACCAACACGGTCTCGGCGGTGACAATTTCCGGGGACTCTGTCGAGATCTACACCCCGGTCCAGTGAGCCTACTGCATTGGAGCGGAAAGGGGAAGCCATGGGCCCGGCTCGATGCGAACCGGCCGTGTCCATTGGATGCTTTGTGGGTCCCTTATGATCTGTTGCAAACTCCATTTTCATTGGAGTCTTGA | 1056 | 55.02 | MFEPPPPPPPPSLLFLFFFFFFISSITAADAIAVFKEAPQFYNSPDCPLVVTGEENGNRLCSYDGIHVAMTLDTAYIRGSMAAVLSVLQHSTCPQNVIFHFVSSASANASDLRATISSSFPYLKFQIYPFDDDAVSRLISTSIRSALDCPLNYARSYLADLLPLCVRRVVYLDSDLILVDDIANLANTPLNDAVLAAPEYCNANFTYYFTPTFWSNPSLSLTFANRNPCYFNTGVMVIDLARWRLGDFTAKIEEWMELQKRIRIYELGSLPPFMLVFAGNIAPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWVPYDLLQTPFSLES | 351 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 982405 | 983460 | - | Cp4.1LG11g01680.1 | Cpe11g00181 | 476975 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe11g00181 | 351 | Pfam | Glycosyl transferase family 8 | 67 | 324 | IPR002495 | GO:0016757 | |
| Cpe11g00181 | 351 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 67 | 331 | IPR029044 | - | |
| Cpe11g00181 | 351 | PANTHER | GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED | 15 | 351 | - | - | |
| Cpe11g00181 | 351 | PANTHER | GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN | 15 | 351 | - | - | |
| Cpe11g00181 | 351 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 66 | 342 | IPR029044 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe07g00444 | Cpe11g00181 | CCT | |
| Cpe06g00125 | Cpe11g00181 | CCT | |
| Cpe06g00125 | Cpe11g00181 | ECH | |
| Cpe07g00444 | Cpe11g00181 | ECH | |
| Cpe02g00145 | Cpe11g00181 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe02g01511 | Cpe-Chr2:12925309 | Cpe11g00181 | Cpe-Chr11:982405 | 1.62E-132 | dispersed | |
| Cpe11g00181 | Cpe-Chr11:982405 | Cpe12g00910 | Cpe-Chr12:7852438 | 4.16E-137 | dispersed | |
| Cpe12g01003 | Cpe-Chr12:8409798 | Cpe11g00181 | Cpe-Chr11:982405 | 8.43E-141 | dispersed | |
| Cpe10g00391 | Cpe-Chr10:2295222 | Cpe11g00181 | Cpe-Chr11:982405 | 0 | wgd | |
| Cpe11g00181 | Cpe-Chr11:982405 | Cpe19g00575 | Cpe-Chr19:4823427 | 0 | wgd | |
| Cpe11g00181 | Cpe-Chr11:982405 | Cpe02g00145 | Cpe-Chr2:724870 | 0 | wgd | |
| Cpe11g00181 | Cpe-Chr11:982405 | Cpe06g00125 | Cpe-Chr6:627456 | 0 | wgd | |
| Cpe11g00181 | Cpe-Chr11:982405 | Cpe07g00444 | Cpe-Chr7:2853315 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe11g00181 | K20893 | - | csv:101218422 | 630.172 |