Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00187 ATGCCGTTTTCCATTTCCTGCGGGATTATCGCTGCGGCAAACCGGAAGATGACCTCCGACGGCGCCACTTCTGCCACCACTAGCCGGCGGAAGCCGTCCTGGAGGGAGCGGGAGAATAATCGGACCAGAGAACGACGAAGGAGAGCCATCGCGGCTAAGATCTACGCTGGCCTTAGGGCTCAAGGCAACTTCAATTTGCCTAAACATTGTGACAATAACGAGGTTCTTAAAGCCCTCTGTGCTGATGCTGGTTGGACCGTCGAAGACGACGGAACCACTTATCGGAAGGGATGCAGGCCGCCCCCAATCGATATCGTCGGCAGTTCCACCAGAGCCACCCCCTACACATCCCAAAATCCAAGCCCATTGTCTTCTTCATTTCCTAGTCCAATGGCATCCTATCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTTTGGACGCCAACCATCCATCAAACCTCATTCCATATCTTCGCCAAGCGATTCCCAAATCACTTCCTGGTCTTAGAATCTCAAACAGTGCTCCCGTGACGCCTCCTCTTTCATCCCCTGCATCAAATTGGGAGGTCACAGCTAAAGAATCCTTGTCCTTGTTGAATTACCCTTTCTTTGCAGTATCCGCCCCAGCTAGCCCGACACGCCCTCAGCTGCTGCATACTCCCGCCACGATCCACGAATGCGATGAGTCTGAATCATCCACCAATGACTCCAATCAATGGGCACTTCTCCGTGCCTGTGCGCCAACTTCTCCCACCTTCAACCTTATGAAACCTGCTGATCAGCATGCTCTGCACGGTGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTGTAAGGTTAAGCCCTGGGAAGGGGAGAAGATCCATGAAGTTGGATTGGAGGATTTAGAGCTCACACTCGGTAGCGGTAAGGCTCAAAACGATAACAATAGTAAGAAACCTTGTTTTGATTGA 978 51.84 MPFSISCGIIAAANRKMTSDGATSATTSRRKPSWRERENNRTRERRRRAIAAKIYAGLRAQGNFNLPKHCDNNEVLKALCADAGWTVEDDGTTYRKGCRPPPIDIVGSSTRATPYTSQNPSPLSSSFPSPMASYQVSPSSSSFPSPSRLDANHPSNLIPYLRQAIPKSLPGLRISNSAPVTPPLSSPASNWEVTAKESLSLLNYPFFAVSAPASPTRPQLLHTPATIHECDESESSTNDSNQWALLRACAPTSPTFNLMKPADQHALHGGFIKENGRGNEFEFLGCKVKPWEGEKIHEVGLEDLELTLGSGKAQNDNNSKKPCFD 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1017927 1022863 + Cp4.1LG11g01850.1 Cpe11g00187 476981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00187 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 28 152 IPR008540 -
Cpe11g00187 325 MobiDBLite consensus disorder prediction 18 44 - -
Cpe11g00187 325 MobiDBLite consensus disorder prediction 109 149 - -
Cpe11g00187 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 17 314 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cpe11g00187 325 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 17 314 - -
Cpe11g00187 325 MobiDBLite consensus disorder prediction 30 44 - -
Cpe11g00187 325 MobiDBLite consensus disorder prediction 91 149 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00438 Cpe11g00187 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe10g00589 Cpe-Chr10:3457736 Cpe11g00187 Cpe-Chr11:1017927 1.44E-90 dispersed
Cpe11g00187 Cpe-Chr11:1017927 Cpe20g00481 Cpe-Chr20:2783513 4.85E-38 dispersed
Cpe11g00187 Cpe-Chr11:1017927 Cpe19g00793 Cpe-Chr19:5997709 2.14E-90 wgd
Cpe11g00187 Cpe-Chr11:1017927 Cpe07g00438 Cpe-Chr7:2812803 4.08E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
50206 PF05687 BES1_N 2.10E-61 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00187 K14503 - csv:101219853 472.241