Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00187 | ATGCCGTTTTCCATTTCCTGCGGGATTATCGCTGCGGCAAACCGGAAGATGACCTCCGACGGCGCCACTTCTGCCACCACTAGCCGGCGGAAGCCGTCCTGGAGGGAGCGGGAGAATAATCGGACCAGAGAACGACGAAGGAGAGCCATCGCGGCTAAGATCTACGCTGGCCTTAGGGCTCAAGGCAACTTCAATTTGCCTAAACATTGTGACAATAACGAGGTTCTTAAAGCCCTCTGTGCTGATGCTGGTTGGACCGTCGAAGACGACGGAACCACTTATCGGAAGGGATGCAGGCCGCCCCCAATCGATATCGTCGGCAGTTCCACCAGAGCCACCCCCTACACATCCCAAAATCCAAGCCCATTGTCTTCTTCATTTCCTAGTCCAATGGCATCCTATCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTTTGGACGCCAACCATCCATCAAACCTCATTCCATATCTTCGCCAAGCGATTCCCAAATCACTTCCTGGTCTTAGAATCTCAAACAGTGCTCCCGTGACGCCTCCTCTTTCATCCCCTGCATCAAATTGGGAGGTCACAGCTAAAGAATCCTTGTCCTTGTTGAATTACCCTTTCTTTGCAGTATCCGCCCCAGCTAGCCCGACACGCCCTCAGCTGCTGCATACTCCCGCCACGATCCACGAATGCGATGAGTCTGAATCATCCACCAATGACTCCAATCAATGGGCACTTCTCCGTGCCTGTGCGCCAACTTCTCCCACCTTCAACCTTATGAAACCTGCTGATCAGCATGCTCTGCACGGTGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTGTAAGGTTAAGCCCTGGGAAGGGGAGAAGATCCATGAAGTTGGATTGGAGGATTTAGAGCTCACACTCGGTAGCGGTAAGGCTCAAAACGATAACAATAGTAAGAAACCTTGTTTTGATTGA | 978 | 51.84 | MPFSISCGIIAAANRKMTSDGATSATTSRRKPSWRERENNRTRERRRRAIAAKIYAGLRAQGNFNLPKHCDNNEVLKALCADAGWTVEDDGTTYRKGCRPPPIDIVGSSTRATPYTSQNPSPLSSSFPSPMASYQVSPSSSSFPSPSRLDANHPSNLIPYLRQAIPKSLPGLRISNSAPVTPPLSSPASNWEVTAKESLSLLNYPFFAVSAPASPTRPQLLHTPATIHECDESESSTNDSNQWALLRACAPTSPTFNLMKPADQHALHGGFIKENGRGNEFEFLGCKVKPWEGEKIHEVGLEDLELTLGSGKAQNDNNSKKPCFD | 325 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1017927 | 1022863 | + | Cp4.1LG11g01850.1 | Cpe11g00187 | 476981 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00187 | 325 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 28 | 152 | IPR008540 | - | |
Cpe11g00187 | 325 | MobiDBLite | consensus disorder prediction | 18 | 44 | - | - | |
Cpe11g00187 | 325 | MobiDBLite | consensus disorder prediction | 109 | 149 | - | - | |
Cpe11g00187 | 325 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 17 | 314 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Cpe11g00187 | 325 | PANTHER | PROTEIN BRASSINAZOLE-RESISTANT 1 | 17 | 314 | - | - | |
Cpe11g00187 | 325 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
Cpe11g00187 | 325 | MobiDBLite | consensus disorder prediction | 91 | 149 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00438 | Cpe11g00187 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe10g00589 | Cpe-Chr10:3457736 | Cpe11g00187 | Cpe-Chr11:1017927 | 1.44E-90 | dispersed | |
Cpe11g00187 | Cpe-Chr11:1017927 | Cpe20g00481 | Cpe-Chr20:2783513 | 4.85E-38 | dispersed | |
Cpe11g00187 | Cpe-Chr11:1017927 | Cpe19g00793 | Cpe-Chr19:5997709 | 2.14E-90 | wgd | |
Cpe11g00187 | Cpe-Chr11:1017927 | Cpe07g00438 | Cpe-Chr7:2812803 | 4.08E-161 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
50206 | PF05687 | BES1_N | 2.10E-61 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00187 | K14503 | - | csv:101219853 | 472.241 |