Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00217 ATGGCGACCCCAGTTGAGCCTCCAAATGGGGTTAGATCTCAAGGAAAGCATTACTATTCAATGTGGCAGACATTGTTTGAGATTGATACTAAATATGTACCCATCAAGCCTATTGGGCGAGGGGCATATGGCATAGTGTGTTCTTCTGTGAATAGGGAAACCAATGAGAAAGTTGCTATAAAGAGGATACATAATGCGTTCGAGAATCGTATCGATGCCCTCCGAACGTTGCGTGAATTGAAGCTCCTTAGACATCTTCGGCACGAAAACGTCATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGCTTCAAAGATGTTTATTTGGTTTATGAGCTGATGGATACTGATTTACATCAGATTATTAAGTCTTCTCAAATGCTTACCAATGATCACTGCCAGTATTTTCTCTTTCAGTTGCTCCGAGGACTAAAGTATCTGCATTCTGCGAACATCCTACACCGGGACTTGAAGCCGGGGAACCTCCTTGTCAACGCAAATTGTGACCTTAAGATATGCGATTTCGGGTTAGCACGAACGAGCAATGGAAAGAACCAGTTTATGACAGAGTATGTCGTAACTCGCTGGTATCGAGCCCCAGAACTGCTGCTCTGCTGTGAGAACTACGGGACATCGATCGATGTGTGGTCTGTAGGATGCATCTTTGCCGAGCTTCTCGGTAGGAAACCTATCTTCCCCGGTACAGAATGTTTGAATCAACTCAAATTGATAATTAACATATTGGGTAGCCAAAGAGAGGAAGATCTTGAGTTCATAGACAATCAAAAGGCAAGGAGGTATATAAAATCCCTCCCATACTCTCCAGGGGCTCCTTTGTACCATCTTTATCCGAACGCTCATCCTCTTGCAATCGATCTGCTACAAAAGATGCTCGTTTTCGACCCATCGAAGAGGATTAGTGTAACCGAAGCATTGCAACATCCTTTCATGTCGCCACTGTATGATCCGAACATCAATCCTCCAGCTCAGGTCCCGATCGATCTTGACATAGACGAGGAGCTAGGTGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCATCCCGAAGATCTGGAAAAACATGCTGAAATGACATGTTTTCATCCCGAACCTACTTCGAGTAGTACTGCGGTGTATTCTTGA 1161 43.76 MATPVEPPNGVRSQGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQMLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNQKARRYIKSLPYSPGAPLYHLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPFMSPLYDPNINPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEDLEKHAEMTCFHPEPTSSSTAVYS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1168178 1172095 + Cp4.1LG11g02030.1 Cpe11g00217 477011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00217 386 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00217 386 CDD STKc_TEY_MAPK 26 361 - -
Cpe11g00217 386 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Cpe11g00217 386 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00217 386 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Cpe11g00217 386 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe11g00217 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Cpe11g00217 386 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Cpe11g00217 386 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Cpe11g00217 386 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cpe11g00217 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
Cpe11g00217 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00399 Cpe11g00217 CCT
Cpe07g00399 Cpe11g00217 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00690 Cpe-Chr1:4004960 Cpe11g00217 Cpe-Chr11:1168178 0 dispersed
Cpe11g00217 Cpe-Chr11:1168178 Cpe14g00538 Cpe-Chr14:3395247 0 dispersed
Cpe20g00780 Cpe-Chr20:6989381 Cpe11g00217 Cpe-Chr11:1168178 8.42E-145 dispersed
Cpe11g00217 Cpe-Chr11:1168178 Cpe07g00399 Cpe-Chr7:2586999 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62702 PF00069 Pkinase 1.40E-71 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00217 K20535 - csv:101213478 751.895