Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00217 | ATGGCGACCCCAGTTGAGCCTCCAAATGGGGTTAGATCTCAAGGAAAGCATTACTATTCAATGTGGCAGACATTGTTTGAGATTGATACTAAATATGTACCCATCAAGCCTATTGGGCGAGGGGCATATGGCATAGTGTGTTCTTCTGTGAATAGGGAAACCAATGAGAAAGTTGCTATAAAGAGGATACATAATGCGTTCGAGAATCGTATCGATGCCCTCCGAACGTTGCGTGAATTGAAGCTCCTTAGACATCTTCGGCACGAAAACGTCATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGCTTCAAAGATGTTTATTTGGTTTATGAGCTGATGGATACTGATTTACATCAGATTATTAAGTCTTCTCAAATGCTTACCAATGATCACTGCCAGTATTTTCTCTTTCAGTTGCTCCGAGGACTAAAGTATCTGCATTCTGCGAACATCCTACACCGGGACTTGAAGCCGGGGAACCTCCTTGTCAACGCAAATTGTGACCTTAAGATATGCGATTTCGGGTTAGCACGAACGAGCAATGGAAAGAACCAGTTTATGACAGAGTATGTCGTAACTCGCTGGTATCGAGCCCCAGAACTGCTGCTCTGCTGTGAGAACTACGGGACATCGATCGATGTGTGGTCTGTAGGATGCATCTTTGCCGAGCTTCTCGGTAGGAAACCTATCTTCCCCGGTACAGAATGTTTGAATCAACTCAAATTGATAATTAACATATTGGGTAGCCAAAGAGAGGAAGATCTTGAGTTCATAGACAATCAAAAGGCAAGGAGGTATATAAAATCCCTCCCATACTCTCCAGGGGCTCCTTTGTACCATCTTTATCCGAACGCTCATCCTCTTGCAATCGATCTGCTACAAAAGATGCTCGTTTTCGACCCATCGAAGAGGATTAGTGTAACCGAAGCATTGCAACATCCTTTCATGTCGCCACTGTATGATCCGAACATCAATCCTCCAGCTCAGGTCCCGATCGATCTTGACATAGACGAGGAGCTAGGTGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCATCCCGAAGATCTGGAAAAACATGCTGAAATGACATGTTTTCATCCCGAACCTACTTCGAGTAGTACTGCGGTGTATTCTTGA | 1161 | 43.76 | MATPVEPPNGVRSQGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQMLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNQKARRYIKSLPYSPGAPLYHLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPFMSPLYDPNINPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEDLEKHAEMTCFHPEPTSSSTAVYS | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1168178 | 1172095 | + | Cp4.1LG11g02030.1 | Cpe11g00217 | 477011 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00217 | 386 | ProSiteProfiles | Protein kinase domain profile. | 32 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00217 | 386 | CDD | STKc_TEY_MAPK | 26 | 361 | - | - | |
Cpe11g00217 | 386 | Gene3D | Phosphorylase Kinase; domain 1 | 19 | 355 | - | - | |
Cpe11g00217 | 386 | Pfam | Protein kinase domain | 33 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00217 | 386 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 326 | IPR011009 | - | |
Cpe11g00217 | 386 | SMART | serkin_6 | 32 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe11g00217 | 386 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 154 | 166 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe11g00217 | 386 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 345 | - | - | |
Cpe11g00217 | 386 | ProSitePatterns | Protein kinases ATP-binding region signature. | 38 | 61 | IPR017441 | GO:0005524 | |
Cpe11g00217 | 386 | ProSitePatterns | MAP kinase signature. | 67 | 170 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cpe11g00217 | 386 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 12 | 366 | - | - | |
Cpe11g00217 | 386 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 12 | 366 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00399 | Cpe11g00217 | CCT | |
Cpe07g00399 | Cpe11g00217 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g00690 | Cpe-Chr1:4004960 | Cpe11g00217 | Cpe-Chr11:1168178 | 0 | dispersed | |
Cpe11g00217 | Cpe-Chr11:1168178 | Cpe14g00538 | Cpe-Chr14:3395247 | 0 | dispersed | |
Cpe20g00780 | Cpe-Chr20:6989381 | Cpe11g00217 | Cpe-Chr11:1168178 | 8.42E-145 | dispersed | |
Cpe11g00217 | Cpe-Chr11:1168178 | Cpe07g00399 | Cpe-Chr7:2586999 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62702 | PF00069 | Pkinase | 1.40E-71 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00217 | K20535 | - | csv:101213478 | 751.895 |