Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00228 ATGGCGGACACAGGCTCCGTCTCCGACAGGAGAATGTCGTGTTCTATCCCCGAGAGGTTCCAGCTCCATGCTGCCATGTTAGCCTTGCAATTCGGCTATGCCGGCTTTCATGTCGTCTCTAGAGCTGCCCTCAATATGGGCATTAGTAAACTCGTCTTCCCTGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTTCCCTTTGCTTATTTCCTTGAAAAGAAGGATAGGCCTGCACTCACTCTTAACTTTGTCCTTCAGTTCTTCCTGCTCGCTCTCGTTGGGATTGAACAAGTGCGACTGAACCGGAAAGATGGGATAGCAAAGGTGATGGGGACTATATGTTGTGTGGCCGGAGCAACGGTGATCACATTATACAAAGGGCCAACCATCTACAGCCCGGCGACGAATGTGACGGTGCAGGGGACGGCGGAGACGGCGGGGATGCTGATGGGGCCAGGAATGTTCCCGTCACTAGGCGACGCAAAGGGCAAAAGCTGGACCTTAGGGTGCGTGTACTTGATCGGGCACTGCTTGTCGTGGTCCGCGTGGCTAGTCTTGCAAGCACCGGTGCTGAAAAAATACCCAGCTCGCCTCTCCGTCACGTCCTATACTTGCTTCTTTGGCCTCATCCAATTCTTCATCATCGCCGCCGTGTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCTGGCGCCGAAGCCTTTAGCATCGTTTATGCGGGGGTGGTGGCTTCGGGGATAGCGTTTGCCGTACAAATATGGTGCATTGACAGAGGTGGCCCGGTCTTCGTTGCCGTCTACCAACCGGTTCAGACCTTCGTTGTCGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTACTTGGGAGGGATCATAGGAGCTGTGCTGATTATATCAGGACTGTACCTTGTACTGTGGGGCAAGAGCGAAGAAAAGAAGTTCTTATTGGAAAGGGCAGTGATCCAGTCTGTCCCGGACCATGGTACTCGCAGGCCAAGTGGACACATCAAACCGTCTCTTAACCAGCCACTTCTTCATCCTACGGCTGACAGTGTTTGA 1065 53.9 MADTGSVSDRRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFLEKKDRPALTLNFVLQFFLLALVGIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPATNVTVQGTAETAGMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLIQFFIIAAVFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKFLLERAVIQSVPDHGTRRPSGHIKPSLNQPLLHPTADSV 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1217523 1220607 - Cp4.1LG11g02270.1 Cpe11g00228 477022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00228 354 PANTHER WAT1-RELATED PROTEIN 15 96 - -
Cpe11g00228 354 MobiDBLite consensus disorder prediction 327 354 - -
Cpe11g00228 354 Pfam EamA-like transporter family 169 307 IPR000620 GO:0016020|GO:0016021
Cpe11g00228 354 PANTHER WAT1-RELATED PROTEIN 96 341 IPR030184 GO:0016021|GO:0022857
Cpe11g00228 354 PANTHER WAT1-RELATED PROTEIN 96 341 - -
Cpe11g00228 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 311 - -
Cpe11g00228 354 PANTHER WAT1-RELATED PROTEIN 15 96 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe06g00085 Cpe11g00228 CCT
Cpe07g00390 Cpe11g00228 CCT
Cpe06g00085 Cpe11g00228 ECH
Cpe07g00390 Cpe11g00228 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01387 Cpe-Chr4:11222436 Cpe11g00228 Cpe-Chr11:1217523 1.60E-93 dispersed
Cpe06g00603 Cpe-Chr6:3715739 Cpe11g00228 Cpe-Chr11:1217523 6.24E-57 dispersed
Cpe11g00228 Cpe-Chr11:1217523 Cpe08g01338 Cpe-Chr8:9650478 1.17E-53 dispersed
Cpe11g00862 Cpe-Chr11:6998686 Cpe11g00228 Cpe-Chr11:1217523 4.04E-60 transposed
Cpe11g00228 Cpe-Chr11:1217523 Cpe06g00085 Cpe-Chr6:424900 5.03E-153 wgd
Cpe11g00228 Cpe-Chr11:1217523 Cpe07g00390 Cpe-Chr7:2529138 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00228 - - csv:101210562 618.231