Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe11g00228 | ATGGCGGACACAGGCTCCGTCTCCGACAGGAGAATGTCGTGTTCTATCCCCGAGAGGTTCCAGCTCCATGCTGCCATGTTAGCCTTGCAATTCGGCTATGCCGGCTTTCATGTCGTCTCTAGAGCTGCCCTCAATATGGGCATTAGTAAACTCGTCTTCCCTGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTTCCCTTTGCTTATTTCCTTGAAAAGAAGGATAGGCCTGCACTCACTCTTAACTTTGTCCTTCAGTTCTTCCTGCTCGCTCTCGTTGGGATTGAACAAGTGCGACTGAACCGGAAAGATGGGATAGCAAAGGTGATGGGGACTATATGTTGTGTGGCCGGAGCAACGGTGATCACATTATACAAAGGGCCAACCATCTACAGCCCGGCGACGAATGTGACGGTGCAGGGGACGGCGGAGACGGCGGGGATGCTGATGGGGCCAGGAATGTTCCCGTCACTAGGCGACGCAAAGGGCAAAAGCTGGACCTTAGGGTGCGTGTACTTGATCGGGCACTGCTTGTCGTGGTCCGCGTGGCTAGTCTTGCAAGCACCGGTGCTGAAAAAATACCCAGCTCGCCTCTCCGTCACGTCCTATACTTGCTTCTTTGGCCTCATCCAATTCTTCATCATCGCCGCCGTGTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCTGGCGCCGAAGCCTTTAGCATCGTTTATGCGGGGGTGGTGGCTTCGGGGATAGCGTTTGCCGTACAAATATGGTGCATTGACAGAGGTGGCCCGGTCTTCGTTGCCGTCTACCAACCGGTTCAGACCTTCGTTGTCGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTACTTGGGAGGGATCATAGGAGCTGTGCTGATTATATCAGGACTGTACCTTGTACTGTGGGGCAAGAGCGAAGAAAAGAAGTTCTTATTGGAAAGGGCAGTGATCCAGTCTGTCCCGGACCATGGTACTCGCAGGCCAAGTGGACACATCAAACCGTCTCTTAACCAGCCACTTCTTCATCCTACGGCTGACAGTGTTTGA | 1065 | 53.9 | MADTGSVSDRRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFLEKKDRPALTLNFVLQFFLLALVGIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPATNVTVQGTAETAGMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLIQFFIIAAVFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKFLLERAVIQSVPDHGTRRPSGHIKPSLNQPLLHPTADSV | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1217523 | 1220607 | - | Cp4.1LG11g02270.1 | Cpe11g00228 | 477022 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe11g00228 | 354 | PANTHER | WAT1-RELATED PROTEIN | 15 | 96 | - | - | |
Cpe11g00228 | 354 | MobiDBLite | consensus disorder prediction | 327 | 354 | - | - | |
Cpe11g00228 | 354 | Pfam | EamA-like transporter family | 169 | 307 | IPR000620 | GO:0016020|GO:0016021 | |
Cpe11g00228 | 354 | PANTHER | WAT1-RELATED PROTEIN | 96 | 341 | IPR030184 | GO:0016021|GO:0022857 | |
Cpe11g00228 | 354 | PANTHER | WAT1-RELATED PROTEIN | 96 | 341 | - | - | |
Cpe11g00228 | 354 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 213 | 311 | - | - | |
Cpe11g00228 | 354 | PANTHER | WAT1-RELATED PROTEIN | 15 | 96 | IPR030184 | GO:0016021|GO:0022857 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe06g00085 | Cpe11g00228 | CCT | |
Cpe07g00390 | Cpe11g00228 | CCT | |
Cpe06g00085 | Cpe11g00228 | ECH | |
Cpe07g00390 | Cpe11g00228 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g01387 | Cpe-Chr4:11222436 | Cpe11g00228 | Cpe-Chr11:1217523 | 1.60E-93 | dispersed | |
Cpe06g00603 | Cpe-Chr6:3715739 | Cpe11g00228 | Cpe-Chr11:1217523 | 6.24E-57 | dispersed | |
Cpe11g00228 | Cpe-Chr11:1217523 | Cpe08g01338 | Cpe-Chr8:9650478 | 1.17E-53 | dispersed | |
Cpe11g00862 | Cpe-Chr11:6998686 | Cpe11g00228 | Cpe-Chr11:1217523 | 4.04E-60 | transposed | |
Cpe11g00228 | Cpe-Chr11:1217523 | Cpe06g00085 | Cpe-Chr6:424900 | 5.03E-153 | wgd | |
Cpe11g00228 | Cpe-Chr11:1217523 | Cpe07g00390 | Cpe-Chr7:2529138 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe11g00228 | - | - | csv:101210562 | 618.231 |