Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe11g00231 ATGCTTCATGCAGATGAAGATGTCTATACTACTGGAGTAGCTCAAATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTGTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATTTTCATCAACAGTTTATATGGTTACCTCTCACTTCTCATAATTGTAAAGTGGTGCTCTGGATCTCAAGCTAACCTGTATCACAGGCACCAAGGTCAATCCTACTCCCTACTTCACAGCACAATCTTGAAATGGAACGATGCCACGGTTCCCACGGCCACGAGGAGTTCGAGTTCAATAGTGTTTGATCATCCGGATGGTGTAAGAATAGCCATTTTCATTTGTGCAACTGTCGGAGTTTTACTAGTTCTAAGCGCTTTCCTGCCCGCCTTGGGGCTCCACTGGGTGGAGTTTCAGAAGAAATCTTCTCGTTTTCGTTGCACCGGGAGAAGGATGAGTGACGACATATTTCTGAAGCTTGGCCATCAACTCAACTCCCAAGGAAAATCGAGAGGTTAG 531 43.31 MLHADEDVYTTGVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLYHRHQGQSYSLLHSTILKWNDATVPTATRSSSSIVFDHPDGVRIAIFICATVGVLLVLSAFLPALGLHWVEFQKKSSRFRCTGRRMSDDIFLKLGHQLNSQGKSRG 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1241860 1244070 - Cp4.1LG11g02360.1 Cpe11g00231 477025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe11g00231 176 PANTHER VACUOLAR PROTON ATPASES 11 72 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe11g00231 176 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 72 - -
Cpe11g00231 176 PANTHER VACUOLAR PROTON ATPASES 112 146 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe11g00231 176 Pfam V-type ATPase 116kDa subunit family 12 72 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe11g00231 176 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 112 146 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00387 Cpe11g00231 CCT
Cpe07g00387 Cpe11g00231 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe11g00231 Cpe-Chr11:1241860 Cpe16g00562 Cpe-Chr16:6414568 5.57E-25 dispersed
Cpe11g00231 Cpe-Chr11:1241860 Cpe15g00555 Cpe-Chr15:6387031 1.16E-26 wgd
Cpe11g00231 Cpe-Chr11:1241860 Cpe04g00112 Cpe-Chr4:997971 1.19E-26 wgd
Cpe11g00231 Cpe-Chr11:1241860 Cpe07g00387 Cpe-Chr7:2501426 8.03E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe11g00231 K02154 - pop:7477645 115.931